Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25]
237,614 sequences; 309,419,125 total letters
Query= NC_003094.2
Length=130759
Score E
Sequences producing significant alignments: (Bits) Value
seq21383 266 3e-66
>seq21383
Length=8822
Score = 266 bits (294), Expect = 3e-66
Identities = 743/1129 (66%), Gaps = 31/1129 (3%)
Strand=Plus/Minus
Query 35873 TTAGCAATCTGTCTGTAGTCGACCACGCCGTTTTCCCATGTACCCGTGATCGGTCCGACG 35932
|| ||||||| || ||||| ||||| |||| || ||| || || ||| |||||
Sbjct 2061 TTCGCAATCTCCCTATAGTCAACCACTCCGTCTTGCCAAGTTCCTTTGACAGGTCCAGTA 2002
Query 35933 GCTACGCCACTGAATGGATTGTCACTGTTGTAGTTGTGGACGCCCGTCCAACCGCGGCCG 35992
|| ||| |||| ||| ||| ||||| | || ||||| |||||||| || ||
Sbjct 2001 GCGTTGCCTGTGAAGGGAATGTTGTCTTTGTAATCATGAACGCCAGTCCAACCACGACCA 1942
Query 35993 TACATTGCTACGCCCAACACGAGtttttttGGATTCACTCGTTGCGCGAGCAAAGCGTCC 36052
||||| || || || | || | || || |||||||||| ||||| ||||| |
Sbjct 1941 TACATAGCAACACCTACTACAATCTTCTTAGGATTCACTCCCTGCGCCAGCAAGTATTTT 1882
Query 36053 ACGGCCACGTTGGCGGTGTACGGTTCGTTAGGTTTCCACGCGGAACCGTACAGTGCCGTC 36112
|| | | || | ||||| | ||| || || |||||||| | |||||| || |||
Sbjct 1881 ACTCCAAAGTCAGATGTGTAAGTTTCCTTGGGATTCCACGCAGGCGCGTACAATGGCGTT 1822
Query 36113 TGATGACCGAGATCGGTATTAGACCAAGCTCCTTTGAAATCATAACTCATCACGAAAATT 36172
||||| || ||| ||| ||||| ||||| ||||| || |||||||||| ||||||
Sbjct 1821 TGATGTCCAAGAGTATCATTTGACCAGGCTCCCTTGAAGTCGTAACTCATCAAGAAAATA 1762
Query 36173 TTATCTAAATACTGTTGTGCTCGGTCGTAATTAACCGCGGCGATCTTGTCTATGCCAGCG 36232
| ||| | ||| | ||| ||| | |||| | ||| | ||| || || |||||
Sbjct 1761 TGATCCATATAATTTTGAGCTTTGCCGTAGTCAACAACTTGGATTTTATCCCATCCAGCA 1702
Query 36233 CTAATCGCTGTGGTGAGTTCTAAAGT---ACGATTCGTTTGTATTTGAACTTGATCGAGC 36289
||||| || | || | ||| | | || |||| || | || || ||| |||
Sbjct 1701 CTAATAGCAGAAGTTAATTCGTATTTCTTACCATTC--TTAGCTGAGAGCTC-ATCCAGC 1645
Query 36290 ATGGCGCGCAATTCGCCCAATAAAGCGATATACGTGTTATTGTCGCGTTCCACATCGCCA 36349
|| | || ||||| || ||| | ||| | | || ||| ||
Sbjct 1644 ATCTCACGTAATTCTTTCATCAAACTTACATAACAATCACCATC---TTCTGGGCTACCG 1588
Query 36350 ACGTTTGGATTGGCGCCTTTGCCGCCCGGAAATTCCCAATCAATATCGATGCCGTCGAAA 36409
| || || || || |||||||| || || || |||||||| ||||| | || |||||
Sbjct 1587 AGGTCAGGGTTAGCACCTTTGCCACCAGGGAACTCCCAATCGATATCAACACCATCGAAG 1528
Query 36410 AATTTCCATGTCAACACAAATTCACGCACGGATTCGACAAAAATTTGTCGCGTTCGCGCA 36469
||||||||||| | | ||| || || || | ||||| ||| |||| | |
Sbjct 1527 AATTTCCATGTTAGAAGAAACTCCTTTACTGACTGCACAAA------TCGTGTTCTCTTA 1474
Query 36470 ---TCGTGCATATGATAGAAG---GGATCGGACAGTGTCCAACCGCCGATTGATGCCAAC 36523
| || | | ||||| ||||||| || ||||| || || || |||| ||
Sbjct 1473 GATTTGTCAACTAAAAAGAAGAAAGGATCGGCAAGCGTCCACCCACCAATAGATGG-AAG 1415
Query 36524 ACTTTTAGATTG-GGATTGGCCAATTTTGCTGCCATTAATTGACCAAAATTGCCTTTGTA 36582
| | || ||| || ||| |||| || ||||||||| ||||| |||||||||||
Sbjct 1414 AATCTTCAATTCAGGGCGGGCTTGTTTTAGTGACATTAATTGGCCAAAGTTGCCTTTGTA 1355
Query 36583 GGGTTCGTTCCATGCGCTAACGCCTGTTTGTGGTTTTTGGAGCGCCGCCCACGGATCGTG 36642
||| |||||||||| | ||| ||||||||||||| | || ||||| ||||||||
Sbjct 1354 GGGCTCGTTCCATGAAGACAATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTG 1295
Query 36643 TATGGAAACTTTAAAATTGTCCCTGCCAGCGCACGATCTTTGCAACGCTTCAAAACTCCC 36702
|| || ||||| || | || | ||| || |||| || | |||| ||||| ||
Sbjct 1294 GATTGAGACTTTGAAGTCCTCACGGCCGCTACAGGATCGCTGTAGTGCTTGGAAACTGCC 1235
Query 36703 CGTGATAGATTTTAAACTGTCGTTTATACCGTCACCGCCGCAAATCGGTATAAATCCGTA 36762
||| ||||||||| || || || ||||||||||||||||| || ||||| |||||
Sbjct 1234 TTCGATCTCTTTTAAACTATCATTGATGCCGTCACCGCCGCAAATTGGAATAAAGCCGTA 1175
Query 36763 TAAAATGTGCGAAAGGTTCGGCGTGGGCACTTTGTCCACGGGAAAAGATCGACCGTAAAC 36822
| | || | ||| || || | || | |||||||| || | | || ||
Sbjct 1174 GAGCAAATGAGTAAGATTAGGTATAGGTATACGATCCACGGGGAATTTCCTAGGATAGAC 1115
Query 36823 GCCCCATTCGACAAAATAGGCCGCTACGGTGTGATCAG-TGTTGTACGTATACGGTTTAT 36881
|||||||| || || ||||| | || | ||| |||| | | | |||| ||||
Sbjct 1114 ACCCCATTCTACGAAGTAGGCACCCACAACTTTTCCAGATGTT-TGCTTGAACGGCTTAT 1056
Query 36882 TGTTTTCTTGCCACGTGTATTGTAACGGTTTTAAATGTTTACCATCGGTGTCTGCGATCA 36941
| |||||| | | ||||||| || || |||||| | |||||||| || || ||
Sbjct 1055 TTTTTTCTCCCAATGTGTATTCTAGAGGAGGTAAATGACTTCCATCGGTATCGGC---CA 999
Query 36942 CGACTTCTACGGTTTGACTAGCCGAA---CAGCCGTCGGCATTGCACAG 36987
|||| | |||| || | ||| |||||||| ||||||| ||
Sbjct 998 CGACAATTTCGGTGGGATCACTTGAACTGCAGCCGTCTTCATTGCAAAG 950
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 417092624818880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |