Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq21383 266 3e-66 >seq21383 Length=8822 Score = 266 bits (294), Expect = 3e-66 Identities = 743/1129 (66%), Gaps = 31/1129 (3%) Strand=Plus/Minus Query 35873 TTAGCAATCTGTCTGTAGTCGACCACGCCGTTTTCCCATGTACCCGTGATCGGTCCGACG 35932 || ||||||| || ||||| ||||| |||| || ||| || || ||| ||||| Sbjct 2061 TTCGCAATCTCCCTATAGTCAACCACTCCGTCTTGCCAAGTTCCTTTGACAGGTCCAGTA 2002 Query 35933 GCTACGCCACTGAATGGATTGTCACTGTTGTAGTTGTGGACGCCCGTCCAACCGCGGCCG 35992 || ||| |||| ||| ||| ||||| | || ||||| |||||||| || || Sbjct 2001 GCGTTGCCTGTGAAGGGAATGTTGTCTTTGTAATCATGAACGCCAGTCCAACCACGACCA 1942 Query 35993 TACATTGCTACGCCCAACACGAGtttttttGGATTCACTCGTTGCGCGAGCAAAGCGTCC 36052 ||||| || || || | || | || || |||||||||| ||||| ||||| | Sbjct 1941 TACATAGCAACACCTACTACAATCTTCTTAGGATTCACTCCCTGCGCCAGCAAGTATTTT 1882 Query 36053 ACGGCCACGTTGGCGGTGTACGGTTCGTTAGGTTTCCACGCGGAACCGTACAGTGCCGTC 36112 || | | || | ||||| | ||| || || |||||||| | |||||| || ||| Sbjct 1881 ACTCCAAAGTCAGATGTGTAAGTTTCCTTGGGATTCCACGCAGGCGCGTACAATGGCGTT 1822 Query 36113 TGATGACCGAGATCGGTATTAGACCAAGCTCCTTTGAAATCATAACTCATCACGAAAATT 36172 ||||| || ||| ||| ||||| ||||| ||||| || |||||||||| |||||| Sbjct 1821 TGATGTCCAAGAGTATCATTTGACCAGGCTCCCTTGAAGTCGTAACTCATCAAGAAAATA 1762 Query 36173 TTATCTAAATACTGTTGTGCTCGGTCGTAATTAACCGCGGCGATCTTGTCTATGCCAGCG 36232 | ||| | ||| | ||| ||| | |||| | ||| | ||| || || ||||| Sbjct 1761 TGATCCATATAATTTTGAGCTTTGCCGTAGTCAACAACTTGGATTTTATCCCATCCAGCA 1702 Query 36233 CTAATCGCTGTGGTGAGTTCTAAAGT---ACGATTCGTTTGTATTTGAACTTGATCGAGC 36289 ||||| || | || | ||| | | || |||| || | || || ||| ||| Sbjct 1701 CTAATAGCAGAAGTTAATTCGTATTTCTTACCATTC--TTAGCTGAGAGCTC-ATCCAGC 1645 Query 36290 ATGGCGCGCAATTCGCCCAATAAAGCGATATACGTGTTATTGTCGCGTTCCACATCGCCA 36349 || | || ||||| || ||| | ||| | | || ||| || Sbjct 1644 ATCTCACGTAATTCTTTCATCAAACTTACATAACAATCACCATC---TTCTGGGCTACCG 1588 Query 36350 ACGTTTGGATTGGCGCCTTTGCCGCCCGGAAATTCCCAATCAATATCGATGCCGTCGAAA 36409 | || || || || |||||||| || || || |||||||| ||||| | || ||||| Sbjct 1587 AGGTCAGGGTTAGCACCTTTGCCACCAGGGAACTCCCAATCGATATCAACACCATCGAAG 1528 Query 36410 AATTTCCATGTCAACACAAATTCACGCACGGATTCGACAAAAATTTGTCGCGTTCGCGCA 36469 ||||||||||| | | ||| || || || | ||||| ||| |||| | | Sbjct 1527 AATTTCCATGTTAGAAGAAACTCCTTTACTGACTGCACAAA------TCGTGTTCTCTTA 1474 Query 36470 ---TCGTGCATATGATAGAAG---GGATCGGACAGTGTCCAACCGCCGATTGATGCCAAC 36523 | || | | ||||| ||||||| || ||||| || || || |||| || Sbjct 1473 GATTTGTCAACTAAAAAGAAGAAAGGATCGGCAAGCGTCCACCCACCAATAGATGG-AAG 1415 Query 36524 ACTTTTAGATTG-GGATTGGCCAATTTTGCTGCCATTAATTGACCAAAATTGCCTTTGTA 36582 | | || ||| || ||| |||| || ||||||||| ||||| ||||||||||| Sbjct 1414 AATCTTCAATTCAGGGCGGGCTTGTTTTAGTGACATTAATTGGCCAAAGTTGCCTTTGTA 1355 Query 36583 GGGTTCGTTCCATGCGCTAACGCCTGTTTGTGGTTTTTGGAGCGCCGCCCACGGATCGTG 36642 ||| |||||||||| | ||| ||||||||||||| | || ||||| |||||||| Sbjct 1354 GGGCTCGTTCCATGAAGACAATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTG 1295 Query 36643 TATGGAAACTTTAAAATTGTCCCTGCCAGCGCACGATCTTTGCAACGCTTCAAAACTCCC 36702 || || ||||| || | || | ||| || |||| || | |||| ||||| || Sbjct 1294 GATTGAGACTTTGAAGTCCTCACGGCCGCTACAGGATCGCTGTAGTGCTTGGAAACTGCC 1235 Query 36703 CGTGATAGATTTTAAACTGTCGTTTATACCGTCACCGCCGCAAATCGGTATAAATCCGTA 36762 ||| ||||||||| || || || ||||||||||||||||| || ||||| ||||| Sbjct 1234 TTCGATCTCTTTTAAACTATCATTGATGCCGTCACCGCCGCAAATTGGAATAAAGCCGTA 1175 Query 36763 TAAAATGTGCGAAAGGTTCGGCGTGGGCACTTTGTCCACGGGAAAAGATCGACCGTAAAC 36822 | | || | ||| || || | || | |||||||| || | | || || Sbjct 1174 GAGCAAATGAGTAAGATTAGGTATAGGTATACGATCCACGGGGAATTTCCTAGGATAGAC 1115 Query 36823 GCCCCATTCGACAAAATAGGCCGCTACGGTGTGATCAG-TGTTGTACGTATACGGTTTAT 36881 |||||||| || || ||||| | || | ||| |||| | | | |||| |||| Sbjct 1114 ACCCCATTCTACGAAGTAGGCACCCACAACTTTTCCAGATGTT-TGCTTGAACGGCTTAT 1056 Query 36882 TGTTTTCTTGCCACGTGTATTGTAACGGTTTTAAATGTTTACCATCGGTGTCTGCGATCA 36941 | |||||| | | ||||||| || || |||||| | |||||||| || || || Sbjct 1055 TTTTTTCTCCCAATGTGTATTCTAGAGGAGGTAAATGACTTCCATCGGTATCGGC---CA 999 Query 36942 CGACTTCTACGGTTTGACTAGCCGAA---CAGCCGTCGGCATTGCACAG 36987 |||| | |||| || | ||| |||||||| ||||||| || Sbjct 998 CGACAATTTCGGTGGGATCACTTGAACTGCAGCCGTCTTCATTGCAAAG 950 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 417092624818880