Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25]
237,614 sequences; 309,419,125 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq24004 545 3e-150
seq32346 91.5 2e-13
seq38285 86.0 8e-12
>seq24004
Length=11461
Score = 545 bits (604), Expect = 3e-150
Identities = 1115/1631 (68%), Gaps = 59/1631 (4%)
Strand=Plus/Minus
Query 62026 TTATTTTATCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGAT 62085
|||||||| | ||||| | || || ||||| | | | ||| ||||| || |||| |
Sbjct 10016 TTATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAGT 9957
Query 62086 AGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGG 62145
|||||||||| ||||||| || | |||| ||| ||||| || ||| |||||
Sbjct 9956 AGTACATTCCTGTTTTTAATCCCATTTTCCAAGCGTGGAAATGAATCGACGTAAGTTTTC 9897
Query 62146 AATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCC 62205
||| | || | || | ||| || || | |||||||||||| || || || ||||| |
Sbjct 9896 CATAGTTAGGTTTAGCAACATGTATGTTAAAAGATTGACTTTGGTCTATAAAAGCTCCTC 9837
Query 62206 TGTCTGCAGCCATTTTTATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATA-AACT 62264
| || || ||||| | |||| || || ||| ||| ||||| | ||||| || || |
Sbjct 9836 TATCAGCTGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAAT 9777
Query 62265 CGCTTAATATCTTCTGGAAGGTTTGTA--TTCT-GAATGGATCCACCATCTACCATAATC 62321
| |||| | |||| |||| ||| | |||| | || |||||| | |||||
Sbjct 9776 CTCTTATT-TCTTTAGGAATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAATA 9718
Query 62322 CTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGG 62381
||| || || || |||| ||| || | | || ||| | | || ||||| ||
Sbjct 9717 AGATTTTTCATATCGTCATCCCACAAATCAGCCCGAGTCAAATCAGTCAGAAGATGATGG 9658
Query 62382 TTAACTACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGT 62441
|| ||||| | ||||||||||| || ||||| | ||||||||| ||| | |||
Sbjct 9657 TTCACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAGGGT 9598
Query 62442 TCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACC 62501
|| | || ||| | || || | |||||| ||||| || |||||||||||||| || | |
Sbjct 9597 TCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGAGCTATC 9538
Query 62502 AATAAACTATTTCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGATGTTCCCAATTCC 62559
|||| | ||| | | ||| ||||| || || || ||||| || |||| | ||
Sbjct 9537 AATAGAGAATTGCGCAAACC--ATGTTTTGCTATCTTTTCTTTAAGGACAGCCCAGTCCC 9480
Query 62560 AAAGATCCGACGG-------TACAACANNNNNNNNNNNATATTGTAGAATACCGTTACTG 62612
|||| || | || | | ||| ||| || || ||||| | ||
Sbjct 9479 AAAGGTCTGTAGGAGTTTTGTCCCACATATC-------ATACTGGAGGATACCTTGGCTT 9427
Query 62613 GC-GTACGATCCTACATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGC 62671
|| | || ||| |||||| |||| ||||| || ||||||| || |||||| ||
Sbjct 9426 GCTGGACTC-CCTTGATATGTGCTGTATGCACCTTCTTTTTCAGCTAATTCACAACTAGC 9368
Query 62672 CTCTAATGCACCGTAATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGG 62731
||||||||||| |||||||| |||||||| || | | ||| ||| | ||||| |
Sbjct 9367 TTCTAATGCACCATAATAAATTGTTTCAAATATTTGTTGATTGAGAAGTATTGCTTTCTC 9308
Query 62732 GCTATCAAATGGATAATTTAAGAGA-ATAAACGCGTCCGCTAATCCTTGAACACCAATAC 62790
|| || | | ||| | | | | | |||||| || || | || |||||||||||||
Sbjct 9307 ACTTTCGTAAG-ATATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATAC 9249
Query 62791 CGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATAT 62850
| ||||||||||||||| |||| || ||| ||||| || | ||||||| |||||| ||
Sbjct 9248 CAATAGGTCTATGTCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAATTAACAT 9189
Query 62851 CTATAATTTTATTGAGATTTC---TGACAATTACTTTGACCACATCCTTCAGTTTGAGAA 62907
| |||| ||| || | |||| | ||||| ||||| | || || | ||| ||
Sbjct 9188 CAATAACTTTGTTTAAATTTTGAGTTACAAT--CTTTGTG-ATTTCTTTTAATTTTTTAA 9132
Query 62908 AATCAAATCGCCCATCTATTACAAACATGTTCAATGCAACAGATGCCAGATTACACACGG 62967
||| ||||| || | ||||||||||| | ||| | || || || || ||||| |
Sbjct 9131 AATTAAATCTGTTATTTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTG 9072
Query 62968 CTACCTCATTAGCATCCGCA---TATTGTATTATCTCAGTGCAAAGATTACTACACTTGA 63024
| || |||| | || | | ||||| | | ||||||||||||||| ||||| || |
Sbjct 9071 CCACTTCAT---CTTCTGAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAA 9015
Query 63025 TAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATG 63084
|||| || | ||||| ||||||||||||| ||||||| ||||||||||| | ||| |||
Sbjct 9014 TAGTGCCAAGATTTTTTTGATTACTCTTTCTGTTACAAGCATCCTTATACAACATGTATG 8955
Query 63085 GAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTA 63144
| |||||||| || | || | ||||||||| | ||||| | || |||| | |
Sbjct 8954 GTGTACCAGTCTCCACTTGGGCTTCTATAATTGACTTCCATAACTCTTGAGCTCTGA--C 8897
Query 63145 TAGATTTGTATCTCCTTTCTCT--TTCGTATAGAGTATACAATCGTTCGAACTCGTCTCC 63202
| | ||| || || ||| ||| ||| ||| | ||| | | || || || ||| |
Sbjct 8896 TTGTTTTATAAATCGTTTTTCTTCTTCATATTTGGCATATAGTTCGTCAAATTCCTCT-C 8838
Query 63203 CCAAACA-TTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCAT 63261
| || || | | | | |||||| |||| |||||||| | ||| || ||||
Sbjct 8837 CAAAGCAGTCAGCGAGGCCAGGACAATCATGAGGACACATGAGACTCCAAACT---TCAT 8781
Query 63262 CCTT---CACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTG 63318
|||| |||| ||||||||| ||||| || ||||| | ||| ||| || ||||| |
Sbjct 8780 CCTTTTCTACTCTTTTCATAAACAGATCTGGTATCCATAAAGCATAAAACAGTTCTCTAG 8721
Query 63319 TTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAAT 63378
||| ||| || || ||||| ||||| || | ||| | ||| | | ||||| | ||
Sbjct 8720 CTCTCATTTCTTCCTTACCTGTGTTCTTCTTTAAATCCAAGAATTCAAATATATCCGCAT 8661
Query 63379 GCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGT 63438
|||| || || || || || || | | || || ||||||||||| || ||||||| |
Sbjct 8660 GCCAAGGCTCTAAATAAATTGCAAATGCGCCGGGACGTTTGTTTCCACCTTGATCTACAT 8601
Query 63439 ATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGG 63498
|||| || || || ||||| |||||||||||||| | | ||| ||||| | ||||| |
Sbjct 8600 ATCTGGCAGTATTGTTATACACTCTCAACATTGGCACTAGACCATTTGAGACCCCATTAG 8541
Query 63499 TACCGGAGATATAGCCTCCACTG-GCACGAAT---ATTACTAATTGATAGACCTATTCCC 63554
| || | || || || ||| || | || || || || || |||||| ||
Sbjct 8540 TGCCAGCTATGTAAGAACC-CTGAGCTCTGATGCAATGTGTA--TG-TAAACCTATGCCA 8485
Query 63555 CCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTA 63614
|| || |||||| |||||||| ||| ||||||| || ||| |||| ||||| ||||||
Sbjct 8484 CCAGCAGATTTAGAAATTAATGCACATTGTTTTAAAGTATCAAAGATACCTTCAATGCTA 8425
Query 63615 TCATCGATCAT 63625
|| || ||||
Sbjct 8424 TCGTCTTTCAT 8414
Score = 95.1 bits (104), Expect = 2e-14
Identities = 105/140 (75%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 64017 ttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCC 64076
|| || || || || |||| ||| ||||| ||||||||||| || | ||||||||||||
Sbjct 7135 TTCTTGGTGTCTTTATGTAAATTGGATATTGCTATTCTGGCAGCCAAAATGGCATAATCG 7076
Query 64077 GGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTT 64136
||||| | ||| || ||| ||||| ||||| || || ||| | || | || | |||
Sbjct 7075 GGATGATCTGTGGTCTTAGTAGCTGCAATTTCAGCAGCTAGATTATCAAGCTCAGCAGTT 7016
Query 64137 GTTACTCCATTATATATTCC 64156
||||| ||| |||||| ||
Sbjct 7015 GTTACACCAGAATATATGCC 6996
Score = 91.5 bits (100), Expect = 2e-13
Identities = 70/83 (84%), Gaps = 0/83 (0%)
Strand=Plus/Minus
Query 63807 TTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTAT 63866
|| |||||||| |||||||| || ||| ||||||||||||| ||||||||||||||||||
Sbjct 7900 TTATTGTTTATCTTCAACAAATATGATCTTTCCAAAGTTTTGAAACCAAAATAGTTGTAT 7841
Query 63867 GAAAAGTCTCGTTCGTAAATAAT 63889
||| |||| || |||| |||
Sbjct 7840 TTAAAATCTCTATCATAAACAAT 7818
>seq32346
Length=5591
Score = 91.5 bits (100), Expect = 2e-13
Identities = 85/108 (79%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 34068 TTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 34127
|| |||| || |||||||| | |||||||| ||||| || || ||||||||||| | |
Sbjct 4158 TTGGATAAGTCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGC 4217
Query 34128 CAGATGTCATGATATTGGATTGGGAAAATAACAAATCTATTTGGATTT 34175
|| || || |||||||||||||||| |||||||| | | ||||||
Sbjct 4218 CATATATCTGGATATTGGATTGGGAATATAACAAAACGTCTAGGATTT 4265
>seq38285
Length=4996
Score = 86.0 bits (94), Expect = 8e-12
Identities = 244/370 (66%), Gaps = 9/370 (2%)
Strand=Plus/Plus
Query 155252 TTATGACTCCA--ATTAATCCCATGTTAGCGGAATCATGTGATTCTGTCAATAAGGCGTT 155309
||||||||||| |||| || |||||||| ||| | || | || || | | ||| |
Sbjct 1965 TTATGACTCCAGTATTA--CCGATGTTAGCTGAAGCTTGCAAATCAGTTGAAATGGCTAT 2022
Query 155310 TAAAAAATTTCCATCAGGAATGTTTGCGGAAGTCAAATACGATGGTGAAAGAGTACAAGT 155369
||||||| |||| || ||||| | || | ||||| ||||| ||| | || |||||
Sbjct 2023 GAAAAAATGTCCAAATGGCATGTTCTCTGAGATAAAATATGATGGAGAACGGGTTCAAGT 2082
Query 155370 TCATaaaaaaaaTAACGAGTTTGCATTCTTTAGTAGAAACATGAAACCAGTACTCTCTCA 155429
|||||||| || ||||| || ||| | | | ||||||||| | ||||
Sbjct 2083 CCATAAAAAGGGAAATGAGTTCAAATATTTTTCCCGTGCCTTAAAACCAGTAATGGCTCA 2142
Query 155430 TAAAGTGGATTATCTCAAAGAATACATACCGAAAGCATTT-AAAAAAGCTACGTCTATCG 155488
||||| | || | ||||| || |||| ||||||||| ||| | | | || |
Sbjct 2143 CAAAGTTAGTCATTTTAAAGATTATTTACCCAAAGCATTTCCTAAAGGAGATGACT-TGA 2201
Query 155489 TATTGGATTCTGAAATTGTTCTTGTAGACGAACATAATG---TACCGCTACCGTTTGGAA 155545
| |||||| ||||| | || | || || | ||| || ||| | || || || |
Sbjct 2202 TTTTGGATGCTGAAGTACTTATGGTTGATGTCAATACTGGAAAACCATTGCCTTTCGGTA 2261
Query 155546 GTTTAGGTATACACAAAAAGAAAGAATATAAAAACTCTAACATGTGTTTGTTCGTGTTTG 155605
|||||||| |||||| | ||||| |||| | || | | || || | | ||||
Sbjct 2262 CATTAGGTATTCACAAACAATCAGAATTTAAAGATGCTCAAGTTTGCTTATATATATTTG 2321
Query 155606 ACTGTTTATA 155615
| || |||||
Sbjct 2322 ATTGCTTATA 2331
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 627946931509920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |