Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25]
237,614 sequences; 309,419,125 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq24004 536 1e-147
seq32346 136 4e-27
>seq24004
Length=11461
Score = 536 bits (594), Expect = 1e-147
Identities = 1188/1762 (67%), Gaps = 31/1762 (2%)
Strand=Plus/Minus
Query 36805 ATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTTTTTAGCCCCAATCTC 36864
|||| ||||| ||| | |||||| | | || |||||||| ||||||| |||| | ||
Sbjct 9987 ATAGCATTTGCTGCTGGTTTTGTGCGTAAGTAGTACATTCCTGTTTTTAATCCCATTTTC 9928
Query 36865 CATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTATCTATATATATTGTC 36924
|| ||| ||||| || || |||||| | || |||| ||| | | || ||| |
Sbjct 9927 CAAGCGTGGAAATGAATCGACGTAAGTTTTCCATAGTTAGGTTTAGCAACATGTATGTTA 9868
Query 36925 ATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATTTCTAAAATACATTTT 36984
| ||||||||||| |||||||| || ||||| || |||||||| | || | || ||
Sbjct 9867 AAAGATTGACTTTGGTCTATAAAAGCTCCTCTATCAGCTGCCATCTGTA---TGGATGTT 9811
Query 36985 T---GAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCTGGTAAATCTA-- 37039
| | || |||||||| || ||||| || | | | |||| || | | | || | |
Sbjct 9810 TTCAGTGAAATCTCCCATACGGTTTTGTACAAATCTCTTAT-TTCTTTAGGAATTTTTTC 9752
Query 37040 AATGT--TGAATAGAACCATTATGTAACACAATTGTATTCTTTATGTCATTATTCCACAT 37097
||| | || ||||| ||||| | | | ||| ||| || || || | || |||||
Sbjct 9751 AATTTCTTGTATAGATCCATTGTTGTATATAATAAGATTTTTCATATCGTCATCCCACAA 9692
Query 37098 ATTTCTACTTATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAA 37157
|| | | | || ||| || || | || || || |||| |||||||||||
Sbjct 9691 ATCAGCCCGAGTCAAATCAGTCAGAAGATGATGGTTCACTACAGGAAATTCTCCAGATAA 9632
Query 37158 TACTCTTCTT--GTATATATATTGCTAGTATATGGTTCAATGGACTCATTATTACTTAAT 37215
||||||||| ||| |||| ||| | ||| | ||||||| || ||| | || | |
Sbjct 9631 GACTCTTCTTTGGTAAATAT-TTGAT-GTAAAGGGTTCAAAAGATTCAGTGTTGCCAAGA 9574
Query 37216 ATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTTCTCAATCCATGT 37275
||||| | ||||| ||||| ||||| || ||||| | || ||| | ||| ||||||
Sbjct 9573 ATTTGTGCAGTAGAGGCAGTCGGCATAGGAGCTATCAATAGAGAATTGCGCAAACCATGT 9514
Query 37276 GTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGGTTCTTTAACCAC 37335
| || | | ||| || || ||| ||||| | ||||| || | || ||||
Sbjct 9513 TTTGCTATCTTTTCTTTAAGGACAGCCCAGTCCCAAAGGTCTGTAGGAGTTTTGTCCCAC 9454
Query 37336 ATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCG 37395
|||||||| || || ||||||| || |||||| | | |||||| || | ||
Sbjct 9453 ATATCATACTGGAGGATACCTTGGCTTGCTGGACTCCCTTGATATGTGCTGTATGCACCT 9394
Query 37396 TAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATT 37455
| ||| ||||| ||| ||||||| ||||| ||| ||||||| |||||||| || |||
Sbjct 9393 TCTTTTTCAGCTAATTCACAACTAGCTTCTAATGCACCATAATAAATTGTTTCAAATATT 9334
Query 37456 TGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCAAT-AATATAAACAC 37514
||| ||| | | | |||||| || || ||| | | ||| | || || | |||| |
Sbjct 9333 TGTTGATTGAGAAGTATTGCTTTCTCACTTTCGTAAG-ATATTCTCATCAACACAAACGC 9275
Query 37515 ATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTAGATCTAGACGA 37574
||| |||| ||||||||||| ||||| || ||||||||| || |||| || | |
Sbjct 9274 ATCTGCCATGCCCTGAACACCAATACCAATAGGTCTATGTCTCATATTTGAAGTTTTTGC 9215
Query 37575 TTCTATCACTGGATAATAATTGATATCTATTATTTTATTTAGATTTTTAACTAGTATTTT 37634
||| || |||||| |||| | ||| || | ||| |||| ||||| | || || ||
Sbjct 9214 TTCAGGGACAGGATAAAAATTAACATCAATAACTTTGTTTAAATTTTGAGTTACAATCTT 9155
Query 37635 CGTAATTATTCTCAACTTGTCGAACATAAATACGTTATTATTAACAAATTTACTCAACGA 37694
|| ||| | | || || | || ||||| |||||| | |||||| | | | |
Sbjct 9154 TGTGATTTCTTTTAATTTTTTAAAATTAAATCTGTTATTTTCAACAAACATGTTAAGTGC 9095
Query 37695 AATAGATCCTAGATTACATACAGCAACTTCATCTTCGTTACTAAATTGTATAATCTCTGT 37754
|| || | || || || || || ||||||||||| | | |||| | || ||| ||
Sbjct 9094 TATGGAAGCAAGGTTGCACACTGCCACTTCATCTTCTGAAGTGTATTGCACAACCTCAGT 9035
Query 37755 ACAGAGATTACTCGATCTAATTGTTCCCAAATTGCTTTGATTGGATTTTTTATTACAAGA 37814
|| ||||| || || |||| || || | ||| ||||||| ||| | |||||||
Sbjct 9034 GCAAAGATTGCTACATTTAATAGTGCCAAGATTTTTTTGATTACTCTTTCTGTTACAAGC 8975
Query 37815 ATCTTTATATAGTATATACGGCGTTCCTTGTTCTATTTGAGCCTCGATAATAGATTTCCA 37874
||| ||||| | || || || || || || | ||| || || ||||| || |||||
Sbjct 8974 ATCCTTATACAACATGTATGGTGTACCAGTCTCCACTTGGGCTTCTATAATTGACTTCCA 8915
Query 37875 TAAACTTCTTG--CTTTAACGATCGCTTTA---Att-tttttCTTTGTTTCGTATTCTAT 37928
||| ||||| || | || | | |||| || |||||||| ||| ||||
Sbjct 8914 TAAC--TCTTGAGCTCTGAC--TTGTTTTATAAATCGTTTTTCTTC--TTCATATTTGGC 8861
Query 37929 ATATAATTTGTTAAAATCATTCCCCCATACA-TCGCATAATCCTGGACATTCGCATGGAC 37987
||||| || || ||| || | | || | || || | || ||||| || ||||
Sbjct 8860 ATATAGTTCGTCAAATTCCT-CTCCAAAGCAGTCAGCGAGGCCAGGACAATCATGAGGAC 8802
Query 37988 ACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATA 38047
|||| ||| ||| ||||||| |||||||| | || |||||| | ||| |||| |||||
Sbjct 8801 ACATGAGACTCCAAACTTCATCCTTTTCTACTCTTTTCATAAACAGATCTGGTATCCATA 8742
Query 38048 ATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTA 38107
| ||| ||| | ||| | | ||| |||||| || ||| ||||| |||| |
Sbjct 8741 AAGCATAAAACAGTTCTCTAGCTCTCATTTCTTCCTTACCTGTGTTCTTCTTTAAATCCA 8682
Query 38108 GAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTT 38167
|| || |||||||| || ||||| || |||| |||||| | | ||| || || | ||
Sbjct 8681 AGAATTCAAATATATCCGCATGCCAAGGCTCTAAATAAATTGCAAATGCGCCGGGACGTT 8622
Query 38168 TATCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTA 38227
| | || || |||| | |||||| | || || ||||| | ||| ||||| || ||||
Sbjct 8621 TGTTTCCACCTTGATCTACATATCTGGCAGTATTGTTATACACTCTCAACATTGGCACTA 8562
Query 38228 TACCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTA 38287
|||||| || || || | || | ||| |||| ||||| ||||| || | |
Sbjct 8561 GACCATTTGAGACCCCATTAGTGCCAGCTATGTAAGAACCCTGAGCTCTGATGCAATGTG 8502
Query 38288 TCGACAATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAA 38347
| || ||||| ||||| ||| ||| || ||||| || ||||||||||| |||||||
Sbjct 8501 TATGTAAACCTATGCCACCAGCAGATTTAGAAATTAATGCACATTGTTTTAAAGTATCAA 8442
Query 38348 ATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCA 38407
| |||||||| || || || || || || | || | ||||| || | || |||
Sbjct 8441 AGATACCTTCAATGCTATCGTCTTTCATAGCTATAAGGAAACAGGAGGAAAGCTGTGGCC 8382
Query 38408 ATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAAT 38467
|| || | ||| || | |||||| ||||||| | || |||| || ||||
Sbjct 8381 GCGGTGTGGCTGCGGAGAACAGTGTAGGGCTTGCATGTGTAAAATATTTCTCTGACATCA 8322
Query 38468 AATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCA 38527
|||||| |||| ||| || ||| || || | || ||||| |||| || || ||||
Sbjct 8321 TATTATAAGTTTTGATTGCACTATCAATGTCTTCACCATGAATGCCTATGGAGACTCTCA 8262
Query 38528 TTAGCATATGTTGTGGTCTTTC 38549
| ||||| ||||| || |||||
Sbjct 8261 TAAGCATGTGTTGAGGCCTTTC 8240
>seq32346
Length=5591
Score = 136 bits (150), Expect = 4e-27
Identities = 170/229 (74%), Gaps = 8/229 (3%)
Strand=Plus/Plus
Query 11890 ATCTCTTACATATGTATCTATTAATAAACTATACATTTCTGAATGAATATTTTCCATAGC 11949
||| |||| |||||| || ||||||||| ||||| |||||||||| ||||||||||||
Sbjct 3805 ATCCCTTATATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATAGC 3864
Query 11950 TATTTGAAATCCATAGAAACATCGTGCCTCTGAACAC-TGTACATCCACATAAAATCTTT 12008
|||||||| |||||||| || | || || | ||| || || || |||| | |
Sbjct 3865 AATTTGAAAACCATAGAAGCACCTGGCTTCAG-TCACTTGAACCTCTTGTGAAAAACGCT 3923
Query 12009 CCGCTAAATTCTCATTTACAATACCATCACTAGATGCAAAAAATGCTAGTATATGTTTTA 12068
|| | || |||||||| |||||||||||| || ||||| ||||||| | ||| || |
Sbjct 3924 CCACCAAGTTCTCATTAACAATACCATCAGAAGCCGCAAAGAATGCTAAGACATGCTTGA 3983
Query 12069 TAAAGTATTTTTC---GTCTTTAGTTAATTTATCCCAATCATCTAAATC 12114
|||| | ||| || |||| ||||| | |||||||| |||| ||
Sbjct 3984 TAAAATGTTTCTCACAATCTT---TTAATGTCTCCCAATCTGCTAAGTC 4029
Score = 114 bits (126), Expect = 1e-20
Identities = 152/209 (73%), Gaps = 3/209 (1%)
Strand=Plus/Plus
Query 11666 ATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATA 11725
|| ||||||||| || || ||||||||||||| ||||||||||| | |||||||||
Sbjct 2993 ATAAGTTCATTACTGAAAGTCAATCCGGGCATCAGACCTCGTTTTTTCAACCAAAATATT 3052
Query 11726 GCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCT 11785
| |||||| || || || ||||||||||| || |||||||| || | || | ||||
Sbjct 3053 GAAGCAAAGCTGCCTGAGAAAAATATTCCCTCAACTGCTGCAAAAGCAATTATACGTTCT 3112
Query 11786 CC--ATATACCT-TGTTGCTAGATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACG 11842
|| || || || | ||||| ||||| | | ||||| || || ||||| || ||
Sbjct 3113 CCAAATGTAGCTGTCTTGCTGCCGATCCACTGTAACGCCCAGTCTGCCTTCTTCTTAACA 3172
Query 11843 CATTCCATTGTTTCTATAGCGTTAAATAA 11871
||| | ||||| || || || |||||
Sbjct 3173 CATGGTAGAGTTTCAATTGCATTGAATAA 3201
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 467133199352160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |