Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25]
237,614 sequences; 309,419,125 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq24004 551 8e-152
seq32346 96.9 5e-15
seq38285 84.2 3e-11
>seq24004
Length=11461
Score = 551 bits (610), Expect = 8e-152
Identities = 1112/1622 (69%), Gaps = 41/1622 (3%)
Strand=Plus/Minus
Query 78698 TTATCTTATCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGAT 78757
|||| ||| | ||||| | || || ||||| | | | ||| ||||| || |||| |
Sbjct 10016 TTATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAGT 9957
Query 78758 AGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGG 78817
|||||||||| ||||||| || | |||| ||| |||||| || ||| |||||
Sbjct 9956 AGTACATTCCTGTTTTTAATCCCATTTTCCAAGCGTGGAAATGAATCGACGTAAGTTTTC 9897
Query 78818 AATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCC 78877
||| | || | || | ||| || || | |||||||||||| || || || ||||| |
Sbjct 9896 CATAGTTAGGTTTAGCAACATGTATGTTAAAAGATTGACTTTGGTCTATAAAAGCTCCTC 9837
Query 78878 TGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACT 78936
| || || ||||| | |||| || || ||| ||| ||||| | ||||| || || |
Sbjct 9836 TATCAGCTGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAAT 9777
Query 78937 CGCTTAATATCTTCTGGAAGGTTTGTA--TTCT-GAATGGATCCACCATCTGCCATAATC 78993
| |||| | |||| |||| ||| | |||| | || |||||| | |||||
Sbjct 9776 CTCTTATT-TCTTTAGGAATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAATA 9718
Query 78994 CTATTCTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGA 79053
||| || || || |||| ||| || | | || ||| | | || ||||| |
Sbjct 9717 AGATTTTTCATATCGTCATCCCACAAATCAGCCCGAGTCAAATCAGTCAGAAGATGATGG 9658
Query 79054 TTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGT 79113
|| ||||| ||||||||||||| || ||||| | ||||||||| ||| | |||
Sbjct 9657 TTCACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAGGGT 9598
Query 79114 TCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACC 79173
|| | |||||| | || || | |||||| ||||| || || || |||||||| || | |
Sbjct 9597 TCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGAGCTATC 9538
Query 79174 AATAAACTATTTCTAAGACCGTATGATCTG--ATTTTATCTTTTAGAGATTCCCAATCCC 79231
|||| | ||| | | ||| ||| | || || || ||||| || |||| ||||
Sbjct 9537 AATAGAGAATTGCGCAAACC--ATGTTTTGCTATCTTTTCTTTAAGGACAGCCCAGTCCC 9480
Query 79232 AAAGATCAGACGGGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATG 79291
|||| || | || | ||| | |||||| || || ||||| | || || |
Sbjct 9479 AAAGGTCTGTAGGAGTTTTGTCCCACATATCATACTGGAGGATACCTTGGCTTGC-TGGA 9421
Query 79292 ATCCTGTG-TATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAAT 79350
||| || ||||| || | ||||| ||||| |||||||||||||| || ||||||
Sbjct 9420 CTCCCTTGATATGTGCTGTATGCACCTTCTTTTTCAGCTAATTCACAACTAGCTTCTAAT 9361
Query 79351 GCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCA 79410
|| || |||||||| ||||| || || | | ||||||| | ||||| || ||
Sbjct 9360 GCACCATAATAAATTGTTTCAAATATTTGTTGATTGAGAAGTATTGCTTTCTCACTTTCG 9301
Query 79411 AATGGATAATTTAAGAGA-ATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGG 79469
| | ||| | | | | | |||||| ||||| | || |||||||||||||| |||||
Sbjct 9300 TAAG-ATATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGG 9242
Query 79470 TCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAAT 79529
|||||||||| |||| ||| ||| ||||| || | ||||||| |||||| ||| ||||
Sbjct 9241 TCTATGTCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAATTAACATCAATAAC 9182
Query 79530 TTTATTGAGATTCCTGACTATTA--CTTTGACCACATCCTTTAGTTTGAGAAAATCAAAT 79587
||| || | ||| ||| | | ||||| | || |||| ||| ||||| ||||
Sbjct 9181 TTTGTTTAAATTT-TGAGTTACAATCTTTGTG-ATTTCTTTTAATTTTTTAAAATTAAAT 9124
Query 79588 CGTCCATCTATTACAAACATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCA 79647
| || | ||||||||||| | || | || || || || || || || || |||
Sbjct 9123 CTGTTATTTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCA 9064
Query 79648 TTAGCATCCGCA---TATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCT 79704
| | || | | ||||| | | |||||||| || || ||||| ||||| || ||
Sbjct 9063 T---CTTCTGAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCA 9007
Query 79705 AAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCA 79764
| ||||| ||||||||||||| ||||||| ||||||||||| | ||| | || ||||||
Sbjct 9006 AGATTTTTTTGATTACTCTTTCTGTTACAAGCATCCTTATACAACATGTATGGTGTACCA 8947
Query 79765 GTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGC-CT---TTATTATAGA 79820
|| || | || | ||||||||| | ||||| | || |||| || || || || |
Sbjct 8946 GTCTCCACTTGGGCTTCTATAATTGACTTCCATAACTCTTGAGCTCTGACTTGTTTTATA 8887
Query 79821 CTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAAC 79880
||| |||||| ||| |||| | ||||| | || || || ||||| || |
Sbjct 8886 A----ATCGTTTTTCTTCTTCATATTTGGCATATAGTTCGTCAAATTCCTCTCCA-AAGC 8832
Query 79881 A-TCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTA 79939
| || | | |||||||| || | ||||||||| | ||| || |||| | | ||
Sbjct 8831 AGTCAGCGAGGCCAGGACAATCATGAGGACACATGAGACTCCAAACTTCATCCTTTTCTA 8772
Query 79940 CTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCT 79999
||| ||||||||| ||||| || ||||| | ||| ||| || ||||| | ||| |
Sbjct 8771 CTCTTTTCATAAACAGATCTGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTT 8712
Query 80000 CCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTT 80059
| || || ||||| ||||| || | ||| | ||| | | ||||| | |||||| || |
Sbjct 8711 CTTCCTTACCTGTGTTCTTCTTTAAATCCAAGAATTCAAATATATCCGCATGCCAAGGCT 8652
Query 80060 CCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGG 80119
| || || || || | | || || ||||||||||| || ||||||| ||||| || |
Sbjct 8651 CTAAATAAATTGCAAATGCGCCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCAG 8592
Query 80120 TGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGA 80179
| || ||||| |||||||||||||| | | |||||| || ||||| || || | |
Sbjct 8591 TATTGTTATACACTCTCAACATTGGCACTAGACCATTTGAGACCCCATTAGTGCCAGCTA 8532
Query 80180 TATAGCTTCCACTG-GCACGAAT---ATTACTAATTGATAGACCTATTCCCCCTGCCATT 80235
| || || ||| || | || || || || || |||||| || || || |
Sbjct 8531 TGTAAGAACC-CTGAGCTCTGATGCAATGTGTA--TG-TAAACCTATGCCACCAGCAGAT 8476
Query 80236 TTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATC 80295
||||| |||||||| ||| ||||||| |||||| |||| || || |||||||| || ||
Sbjct 8475 TTAGAAATTAATGCACATTGTTTTAAAGTATCAAAGATACCTTCAATGCTATCGTCTTTC 8416
Query 80296 AT 80297
||
Sbjct 8415 AT 8414
Score = 96.9 bits (106), Expect = 5e-15
Identities = 88/111 (79%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 80478 CTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 80537
||| || ||||| |||||||| || ||| ||||||||||||| |||||||||||||||||
Sbjct 7901 CTTATTGTTTATCTTCAACAAATATGATCTTTCCAAAGTTTTGAAACCAAAATAGTTGTA 7842
Query 80538 TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTT 80588
| ||| |||| || |||| ||| | |||| | ||| ||||| | |||
Sbjct 7841 TTTAAAATCTCTATCATAAACAATGGCAGAGTCTAATTTGTCCTTGTTTTT 7791
Score = 95.1 bits (104), Expect = 2e-14
Identities = 105/140 (75%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 80689 ttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCT 80748
|| || || || || |||| ||| |||| ||||||||||| || ||||||||||||||
Sbjct 7135 TTCTTGGTGTCTTTATGTAAATTGGATATTGCTATTCTGGCAGCCAAAATGGCATAATCG 7076
Query 80749 GGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTT 80808
||||| | ||| || ||| ||||| ||||| || || ||| | || | || | |||
Sbjct 7075 GGATGATCTGTGGTCTTAGTAGCTGCAATTTCAGCAGCTAGATTATCAAGCTCAGCAGTT 7016
Query 80809 GTTACTCCATTATATATTCC 80828
||||| ||| |||||| ||
Sbjct 7015 GTTACACCAGAATATATGCC 6996
>seq32346
Length=5591
Score = 96.9 bits (106), Expect = 5e-15
Identities = 86/108 (80%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 50446 TTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 50505
|| |||| ||||||||||| | |||||||| ||||| || || ||||||||||| | |
Sbjct 4158 TTGGATAAGTCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGC 4217
Query 50506 CAGATGTCATGATATTGGATTGGGAAAATAACAAATCTATTTGGATTT 50553
|| || || |||||||||||||||| |||||||| | | ||||||
Sbjct 4218 CATATATCTGGATATTGGATTGGGAATATAACAAAACGTCTAGGATTT 4265
Score = 84.2 bits (92), Expect = 3e-11
Identities = 115/161 (71%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 50251 TACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCG 50310
||||| || ||||||| ||||| || || || ||||| || ||||| || || || ||
Sbjct 3836 TACATCTCTGAATGAACATTTTCCATAGCAATTTGAAAACCATAGAAGCACCTGGCTTCA 3895
Query 50311 GTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTG 50370
|| | || || ||| |||| || || | || || ||||| || || || |||
Sbjct 3896 GTCACTTGAACCTCTTGTGAAAAACGCTCCACCAAGTTCTCATTAACAATACCATCAGAA 3955
Query 50371 GCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTC 50411
|| ||||| || || || ||||| || ||||||||||| ||
Sbjct 3956 GCCGCAAAGAATGCTAAGACATGCTTGATAAAATGTTTCTC 3996
>seq38285
Length=4996
Score = 84.2 bits (92), Expect = 3e-11
Identities = 221/332 (67%), Gaps = 9/332 (3%)
Strand=Plus/Plus
Query 173691 TTATGACTCCA--ATTAATCCCATGTTAGCAGAATCATGTGATTCTGTCAATAAGGCGTT 173748
||||||||||| |||| || |||||||| ||| | || | || || | | ||| |
Sbjct 1965 TTATGACTCCAGTATTA--CCGATGTTAGCTGAAGCTTGCAAATCAGTTGAAATGGCTAT 2022
Query 173749 TAAAAAATTTCCATCAGGAATGTTTGCGGAAGTCAAATACGATGGTGAAAGAGTACAAGT 173808
||||||| |||| || ||||| | || | ||||| ||||| ||| | || |||||
Sbjct 2023 GAAAAAATGTCCAAATGGCATGTTCTCTGAGATAAAATATGATGGAGAACGGGTTCAAGT 2082
Query 173809 TCATAAAAATAATAACGAGTTTGCCTTCTTTAGTAGAAACATGAAACCAGTACTCTCTCA 173868
|||||||| || ||||| | ||| | | | ||||||||| | ||||
Sbjct 2083 CCATAAAAAGGGAAATGAGTTCAAATATTTTTCCCGTGCCTTAAAACCAGTAATGGCTCA 2142
Query 173869 TAAAGTGGATTATCTCAAAGAATACATACCGAAAGCATTT-AAAAAAGCTACGTCTATCA 173927
||||| | || | ||||| || |||| ||||||||| ||| | | | || | |
Sbjct 2143 CAAAGTTAGTCATTTTAAAGATTATTTACCCAAAGCATTTCCTAAAGGAGATGACT-TGA 2201
Query 173928 TATTGGATTCTGAAATTGTTCTTGTAGACGAACATAATG---TACCGCTACCGTTTGGAA 173984
| |||||| ||||| | || | || || | ||| || ||| | || || || |
Sbjct 2202 TTTTGGATGCTGAAGTACTTATGGTTGATGTCAATACTGGAAAACCATTGCCTTTCGGTA 2261
Query 173985 GTTTAGGTATACACAAAAAGAAAGAATATAAA 174016
|||||||| |||||| | ||||| ||||
Sbjct 2262 CATTAGGTATTCACAAACAATCAGAATTTAAA 2293
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 716135415966960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |