Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq32346 143 3e-29 >seq32346 Length=5591 Score = 143 bits (158), Expect = 3e-29 Identities = 168/225 (75%), Gaps = 4/225 (2%) Strand=Plus/Plus Query 13894 CCTCATCTCTACTAATAAGTTCGTT--TGAAAATGTTAATCCTGGCATCAATCCTCGttt 13951 ||||||| ||| ||||||||| || ||||| || ||||| ||||||| |||||||| Sbjct 2979 CCTCATCCCTAGAAATAAGTTCATTACTGAAA--GTCAATCCGGGCATCAGACCTCGTTT 3036 Query 13952 ttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAA 14011 ||| ||||||||||||| |||||| || || || ||||||||||||||||| ||||| Sbjct 3037 TTTCAACCAAAATATTGAAGCAAAGCTGCCTGAGAAAAATATTCCCTCAACTGCTGCAAA 3096 Query 14012 CGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTC 14071 || |||| ||||||||||| | ||| | ||| | ||||| | | ||||| || Sbjct 3097 AGCAATTATACGTTCTCCAAATGTAGCTGTCTTGCTGCCGATCCACTGTAACGCCCAGTC 3156 Query 14072 AGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAA 14116 | || || |||| | | | |||||||| ||||| ||||| Sbjct 3157 TGCCTTCTTCTTAACACATGGTAGAGTTTCAATTGCATTGAATAA 3201 Score = 104 bits (114), Expect = 2e-17 Identities = 155/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 14142 ATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGA 14201 || ||||| ||||| | ||| ||||| || || || | ||||||||||| || ||| Sbjct 3812 ATATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATAGCAATTTGA 3871 Query 14202 AAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAA 14261 |||||||| ||||| || ||||| | | ||| || || |||| | || |||| Sbjct 3872 AAACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGTGAAAAACGCTCCACCAAG 3931 Query 14262 TTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTAT 14321 || |||||||| ||||||||| ||| ||||| ||||| || | | || ||||| | | Sbjct 3932 TTCTCATTAACAATACCATCAGAAGCCGCAAAGAATGCTAAGACATGCTTGATAAAATGT 3991 Query 14322 TGCTCTTCATTGTTGAGTTTTTTCCAATCGGATAAATCCT 14361 | ||| || || | | | | |||||| | ||| |||| Sbjct 3992 TTCTCACAATCTTTTAATGTCTCCCAATCTGCTAAGTCCT 4031 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478303123887600