Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25]
237,614 sequences; 309,419,125 total letters
Query= NC_004062.1
Length=119217
Score E
Sequences producing significant alignments: (Bits) Value
seq31223 102 6e-17
seq53127 89.7 4e-13
seq88586 87.8 1e-12
>seq31223
Length=3647
Score = 102 bits (112), Expect = 6e-17
Identities = 137/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 42919 TCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAA 42978
|| ||||| | || || || |||| |||||| | || || ||||| ||||| ||||||
Sbjct 83 TCTTTTTGGATGTTATAGTCAGACAGTGTACGACCATCTTCTAATTGCTTGCCCGCAAAA 142
Query 42979 ATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTG 43038
|| | || |||||||| | || | |||||||| || ||| |||| || |
Sbjct 143 ATAAGACGTTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGGATTTTAGCTTTCACATTT 202
Query 43039 CCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACA 43098
||| |||||| ||| || || |||| || || |||||||| || || ||||| |||
Sbjct 203 TCAATTGTGTCAGAAGCTTCAACTTCTAAAGTAATTGTTTTTCCAGTGAGTGTTTTAACA 262
Query 43099 AAAATTTGCAT 43109
|||||||||||
Sbjct 263 AAAATTTGCAT 273
Score = 86.0 bits (94), Expect = 5e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|| ||||| || | || ||||| || | ||| || ||||| | ||| || || ||
Sbjct 503 CCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCAGAA 562
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
| || ||| |||| |||||||| || || || |||||||| || |||||||| | ||
Sbjct 563 AGAGTGCGTCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGA 622
Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062
| ||||| || || || |||| || | ||| || ||| || || ||
Sbjct 623 ATGCCTTCCTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACT 682
Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTT 43112
|| | || || ||||| || || || ||||||||||| || ||||||||
Sbjct 683 TCCAAAGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTT 732
>seq53127
Length=7988
Score = 89.7 bits (98), Expect = 4e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 42898 AACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCG 42957
|| || ||||| | ||| |||||| || | ||| || || |||||||| ||| | ||
Sbjct 7177 AAAACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCTGACAATGTGCGTCCATCT 7118
Query 42958 TCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCG 43017
|||| ||| || ||||| ||||||| || ||||| || | || | ||||| || ||
Sbjct 7117 TCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGGTCTGGAGGAATGCCTTCCTTGTCT 7058
Query 43018 CTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTT 43077
||| | || || | | | ||| || ||| || || || | || ||||||
Sbjct 7057 TGAATCTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAAAGTGATAGTT 6998
Query 43078 TTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
|| || || | ||||||||||||||||||||
Sbjct 6997 TTCCCAGTCAATGTTTTCACAAAAATTTGCAT 6966
Score = 87.8 bits (96), Expect = 1e-12
Identities = 147/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 42898 AACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCG 42957
|| || ||||| | ||| |||||| || | ||| || || |||||||| ||| | ||
Sbjct 7405 AAAACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCCGACAATGTGCGTCCATCT 7346
Query 42958 TCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCG 43017
|||| ||| || || || ||||||| || |||||||| | || | ||||| || ||
Sbjct 7345 TCCAGTTGCTTTCCAGCGAAAATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTTATCT 7286
Query 43018 CTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTT 43077
||| | || || | | | ||| || ||| || || || | || ||||||
Sbjct 7285 TGAATCTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAAAGTGATAGTT 7226
Query 43078 TTTCCGGTTAGAGTTTTCACAAAAATTTGCATT 43110
|| || || || || || |||||||||||||||
Sbjct 7225 TTCCCAGTCAGTGTCTTTACAAAAATTTGCATT 7193
>seq88586
Length=4530
Score = 87.8 bits (96), Expect = 1e-12
Identities = 161/236 (68%), Gaps = 0/236 (0%)
Strand=Plus/Plus
Query 42875 AATCGTCGCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGT 42934
||| || ||||| || |||| | ||| | ||| | ||| |||||||| | ||||
Sbjct 2171 AATAGTTACCTCCGCGAAGTCGAAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGT 2230
Query 42935 AATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGAT 42994
| || |||||||||||| | || || | |||||| || ||||| ||||| || || || |
Sbjct 2231 AGTCAGACAATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGT 2290
Query 42995 CGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAG 43054
| | || | |||||| || || ||| |||| || | | | || || |
Sbjct 2291 CTGGTGGAATACCTTCCTTATCTTGGATTTTAGCTTTAACATTTTCTATAGTATCAGAGG 2350
Query 43055 CCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATT 43110
|||| || || | || || ||||| || || || || || || ||||||||||||
Sbjct 2351 CCTCCACCTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCATT 2406
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380265183909612
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |