Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq21383 244 1e-59 seq207359 123 3e-23 seq44559 123 3e-23 seq31223 118 1e-21 seq53127 116 4e-21 seq88586 93.3 4e-14 >seq21383 Length=8822 Score = 244 bits (270), Expect = 1e-59 Identities = 475/691 (69%), Gaps = 18/691 (3%) Strand=Plus/Minus Query 19402 CCGACGTTGGGGTTCGCGCCATTGCCGCCTGGAAACTCCCAATCGATATCGACGCCATCG 19461 |||| || ||||| || || ||||| || || ||||||||||||||||| || |||||| Sbjct 1590 CCGAGGTCAGGGTTAGCACCTTTGCCACCAGGGAACTCCCAATCGATATCAACACCATCG 1531 Query 19462 AAGAATTTCCACGTTTCTAGATACTCTTGGACCGAATCGATAAA-CGTCTGCCGTACGCT 19520 ||||||||||| ||| ||| |||| | || || | | ||| ||| | | | | | Sbjct 1530 AAGAATTTCCATGTTAGAAGAAACTCCTTTACTGACTGCACAAATCGTGTTCTCTTAGAT 1471 Query 19521 CTTGTCGTGCATATGGTAAAATGGGTCCGAAAGTGTCCAGCCCCCGATCGAAGGTAGCAC 19580 ||||| | | | | || || || | ||| ||||| || || || || || || | Sbjct 1470 -TTGTCAACTAAAAAGAAGAAAGGATCGGCAAGCGTCCACCCACCAATAGATGGAAGAAT 1412 Query 19581 TTTTAGATGAGGGTTCGCCAATTTGGCTGCCATAAGTTGGCCAAAGTTGCCTTTGTACGG 19640 || | | |||| || ||| || ||| | ||||||||||||||||||||| || Sbjct 1411 CTTCAATTCAGGGCGGGCTTGTTTTAGTGACATTAATTGGCCAAAGTTGCCTTTGTAGGG 1352 Query 19641 TTCGTTCCATGCGCTGACA--CCTTTTTGGGGTTTCTGTATGGCCGCCCAAGGATCGTGA 19698 |||||||||| |||| |||||||| ||||| |||| || ||||| |||||||| Sbjct 1351 CTCGTTCCATGAA--GACAATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGG 1294 Query 19699 ATGGCCACTTTGAAGTCGGCACGACCGGCACACGAACGTTGCAACGCTTCGAAACTGCCC 19758 || | ||||||||||| |||| ||| ||| || || || | |||| ||||||||| Sbjct 1293 ATTGAGACTTTGAAGTCCTCACGGCCGCTACAGGATCGCTGTAGTGCTTGGAAACTGCCT 1234 Query 19759 GGGACAGTTTTGAGGGCATCATTGATGCCGTCGCCACCGCACATGGGCACGAAACCGTAC 19818 || ||| | ||||||||||||||| || ||||| || || | || ||||| Sbjct 1233 TCGATCTCTTTTAAACTATCATTGATGCCGTCACCGCCGCAAATTGGAATAAAGCCGTAG 1174 Query 19819 AACAAATGCGACAAGTTCGGTGTGGGCACTTTATCGACGGGAAACTGTCGCGGATACACA 19878 | |||||| | | || ||| | || | ||| ||||| || | | ||||| ||| Sbjct 1173 AGCAAATGAGTAAGATTAGGTATAGGTATACGATCCACGGGGAATTTCCTAGGATAGACA 1114 Query 19879 CCCCATTCGACAAAGTATGCACCTATGATCTTGTCCGAGCGCTTT--TCGAACCGTTTAT 19936 |||||||| || ||||| ||||| | | ||| ||| || ||| | |||| | |||| Sbjct 1113 CCCCATTCTACGAAGTAGGCACCCA-CAACTTTTCC-AGATGTTTGCTTGAACGGCTTAT 1056 Query 19937 TGTTTTCGAGATAATCGTAGACGAGCGGTTCGAGATGCGATCCGTCCGTGTCGGCTACGA 19996 | ||||| | ||| | || || | ||| ||| || || ||||| |||| Sbjct 1055 TTTTTTCTCCCAATGTGTATTCTAGAGGAGGTAAATGACTTCCATCGGTATCGGCCACGA 996 Query 19997 CAACTTTAACCGGTGCGCT-AGTCGAA---CAGCCGTCGACGTTGCACAGTTTCACAGTC 20052 ||| || ||||| | | | | ||| |||||||| | ||||| || | ||| ||| Sbjct 995 CAATTT----CGGTGGGATCACTTGAACTGCAGCCGTCTTCATTGCAAAGCTCCACTGTC 940 Query 20053 ATATCGTACTTGCCGCCCTTAGTAACGGGAA 20083 || | ||| | || || || | |||||||| Sbjct 939 ATTTGGTATCTTCCACCTTTCGAAACGGGAA 909 >seq207359 Length=487 Score = 123 bits (136), Expect = 3e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || |||| |||||| | ||||| || | |||||||||||||| |||||||| || | Sbjct 441 CCACCTCTTAAACGAAGTACTAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGAC 382 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | ||| | ||||| | ||| || || ||| | || |||||||| ||||| ||||| Sbjct 381 AGTGTACGACCATCTTCTAATTGCTTGCCCGCAAAAATAAGACGTTGTTGATCCGGAGGA 322 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 |||||||||||||| ||||| ||| | | ||| | ||||| | | ||| ||| Sbjct 321 ATGCCTTCTTTGTCTTGGATTTTAGCTTTCACATTTTCAATTGTGTCAGAAGCTTCAACT 262 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || | ||| | || || || || | |||||| || || ||||||||| Sbjct 261 TCTAAAGTAATTGTTTTTCCAGTGAGTGTTTTAACAAAGATTTGCATA 214 >seq44559 Length=2984 Score = 123 bits (136), Expect = 3e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || ||||| | ||||| |||||||||| ||||| |||||||| |||||||| || | Sbjct 434 CCACCTCGCAGACGCAGTACTAAATGAAGGGTAGACTCTTTTTGGATGTTGTAGTCAGAC 375 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | |||| ||||| || || || |||||| |||| |||||||| ||||| || || Sbjct 374 AGGGTGCGACCATCTTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGTTGATCTGGGGGA 315 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || || ||||| || ||| || |||| | ||| | ||||| | || || || Sbjct 314 ATACCCTCTTTATCTTGAATCTTAGCCTTTACATTTTCAATGGTGTCAGATGGCTCCACC 255 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || | ||| | |||||||| || | ||| || || |||||||||||| Sbjct 254 TCCAGAGTTATAGTCTTGCCTGTTAGTGTCTTGACAAATATTTGCATA 207 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 |||||||| | ||| | || || |||| || || ||||| || || ||||| || | Sbjct 890 CCTCCTCGGAGACGGAGTACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCAGAC 831 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | |||| ||||| ||||| |||||||| |||| |||||||| ||||| ||||| Sbjct 830 AGGGTGCGGCCATCTTCCAGTTGCTTACCAGCGAAGATAAGACGTTGTTGATCTGGAGGA 771 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || ||||| || || ||| || ||| | | ||| | ||||| | || || ||| Sbjct 770 ATTCCTTCCTTATCTTGAATCTTAGCTTTAACATTTTCAATGGTGTCTGAAGGCTCAACT 711 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || | ||| | || || || || | |||||| || ||||||||||| Sbjct 710 TCCAAAGTTATTGTTTTTCCAGTAAGTGTTTTGACAAATATTTGCAT 664 Score = 96.9 bits (106), Expect = 4e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || || | ||| | ||||| || | || || ||||| || || |||||||| | Sbjct 662 CCACCACGGAGACGAAGCACTAAGTGCAGGGTTGACTCTTTCTGAATATTGTAATCAGAC 603 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | |||| ||||| | ||| || |||||| | || ||||| || || || || || Sbjct 602 AAAGTGCGACCATCTTCCAATTGCTTTCCAGCAAAAATGAGACGCTGTTGGTCTGGGGGG 543 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 ||||| || || || ||||| ||| | | || | ||||| | ||||||||| Sbjct 542 ATGCCCTCCTTATCCTGTATTTTAGCTTTGACATTCTCGATTGTGTCAGATGGTTCTACT 483 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || | || | ||||| || ||||||||||| || |||||||||||| Sbjct 482 TCCAGGGTAATGGTCTTTCCAGTCAATGTTTTGACAAATATTTGCATA 435 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 |||||||||||||| || || || || | || || ||||| || || ||||| || Sbjct 1118 CCTCCTCGTAAACGTAATACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAG 1059 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | || | || || || || || ||||| | || |||||||| ||||| || || Sbjct 1058 AGAGTACGGCCATCCTCCAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGA 999 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || || |||||||| || || ||| | | ||| | ||||| | |||||| ||| Sbjct 998 ATACCCTCTTTGTCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACT 939 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATAGCT 143188 || | || | || || || |||| ||| ||||| || || |||||| || Sbjct 938 TCTAATGTGATAGTTTTCCCTGTCAGTGTCTTTACAAAGATCTGCATACCT 888 >seq31223 Length=3647 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || |||| |||||| | ||||| || | |||||||||||||| ||||| || || | Sbjct 47 CCACCTCTTAAACGAAGTACTAAGTGCAAAGTAGATTCTTTTTGGATGTTATAGTCAGAC 106 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | ||| | ||||| | ||| || || ||| | || |||||||| ||||| ||||| Sbjct 107 AGTGTACGACCATCTTCTAATTGCTTGCCCGCAAAAATAAGACGTTGTTGATCTGGAGGA 166 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 |||||||||||||| ||||| ||| | | ||| | ||||| | | ||| ||| Sbjct 167 ATGCCTTCTTTGTCTTGGATTTTAGCTTTCACATTTTCAATTGTGTCAGAAGCTTCAACT 226 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || | ||| | || || || || | |||||| || || ||||||||| Sbjct 227 TCTAAAGTAATTGTTTTTCCAGTGAGTGTTTTAACAAAAATTTGCATA 274 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || || | |||||| || || |||| |||||||||||||| || || || || Sbjct 503 CCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCAGAA 562 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | |||| |||||| | ||| || ||||| | |||| |||||| ||||| ||||| Sbjct 563 AGAGTGCGTCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGA 622 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 |||||||| ||||| |||||| ||||| | ||| | || || | ||||| ||| Sbjct 623 ATGCCTTCCTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACT 682 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || | ||| | || || || || | |||||| || || || ||||| Sbjct 683 TCCAAAGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCAT 729 >seq53127 Length=7988 Score = 116 bits (128), Expect = 4e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGTCTTCGAGTTGTTTACC 143046 ||||||||||| || ||||||||||| | ||||| || | ||||| || || || || Sbjct 6022 GTAGATTCTTTCTGAATGTTGTAATCAGATAGTGTGCGTCCA-TCTTCAAGCTGCTTTCC 5964 Query 143047 AGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTT 143106 |||| | || || | ||||||||| || || || || ||||| || ||||||| ||| Sbjct 5963 AGCAAAAATAAGTCTTTGCTGATCTGGGGGAATTCCCTCTTTATCCTGAATTTTTGCTTT 5904 Query 143107 TAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGT 143166 | | ||| | || || | || || ||||| | ||| | |||||||| |||| ||| Sbjct 5903 AACATTTTCAATTGTATCAGAAGGCTCAACTTCCAAAGTGATAGTCTTGCCAGTCAGTGT 5844 Query 143167 TTTTACGAATATTTGCAT 143184 |||||||| |||||||| Sbjct 5843 CTTTACGAAAATTTGCAT 5826 Score = 111 bits (122), Expect = 2e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || |||| || ||||||||||||||| | ||||| || || || || || || || | Sbjct 7192 CCACCTCTTAGACGCAAAACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCTGAC 7133 Query 143018 ATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | ||||| || | ||||| ||||| || || || | ||||| | ||| || || ||||| Sbjct 7132 AATGTGCGTCCA-TCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGGTCTGGAGG 7074 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 |||||||| ||||| ||| ||| || | | ||| | || || | | ||| || Sbjct 7073 AATGCCTTCCTTGTCTTGAATCTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCAC 7014 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||| | ||| | || || || ||||||||||| || || |||||||| Sbjct 7013 TTCCAAAGTGATAGTTTTCCCAGTCAATGTTTTCACAAAAATTTGCAT 6966 Score = 111 bits (122), Expect = 2e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || |||| || ||||||||||||||| | ||||| || || || || || || || | Sbjct 7420 CCACCTCTTAGACGCAAAACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCCGAC 7361 Query 143018 ATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | ||||| || | ||||| ||||| || ||||| | ||||| | ||| ||||| ||||| Sbjct 7360 AATGTGCGTCCA-TCTTCCAGTTGCTTTCCAGCGAAAATCAGTCTTTGTTGATCTGGAGG 7302 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 |||||||| || || ||| ||| || | | ||| | || || | | ||| || Sbjct 7301 AATGCCTTCCTTATCTTGAATCTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCAC 7242 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||| | ||| | || || || |||| ||| ||||| || |||||||| Sbjct 7241 TTCCAAAGTGATAGTTTTCCCAGTCAGTGTCTTTACAAAAATTTGCAT 7194 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || | || |||||||||||| || | |||||||| || || || || || || | Sbjct 5824 CCACCCCTTAGACGCAAAACTAAGTGCAAAGTAGATTCCTTCTGGATATTATAGTCTGAC 5765 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | ||||| | ||||| | ||| || || || | || || | ||| ||||| ||||| Sbjct 5764 AGTGTGCGCCCATCTTCCAATTGCTTTCCGGCGAAAATTAGTCTTTGTTGATCTGGAGGG 5705 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 |||||||| ||||| ||| ||| |||| | ||| | || || | | ||| ||| Sbjct 5704 ATGCCTTCCTTGTCTTGAATCTTTGCCTTTACGTTTTCGATTGTATCAGAAGCTTCCACT 5645 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || | || | || || || || || ||||||||||| |||||||| Sbjct 5644 TCCAATGTGATGGTTTTCCCAGTTAAAGTTTTTACGAAGATTTGCAT 5598 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || |||| | ||| | |||||||| | ||||||||||| || || ||||| || Sbjct 6964 CCACCTCTCAGACGAAGTACTAAATGTAAAGTAGATTCTTTCTGAATATTGTAGTCAGAT 6905 Query 143018 ATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | ||| | || | || || || || || |||||| | || || | ||| || || ||||| Sbjct 6904 AGTGTACGTCCA-TCCTCAAGCTGCTTTCCAGCAAAAATAAGCCTTTGTTGGTCTGGAGG 6846 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 |||||||| || || |||||| || | | ||| | ||||| | ||| || || Sbjct 6845 AATGCCTTCCTTATCTTGAATTTTCGCCTTAACATTTTCGATTGTGTCAGAGGGCTCAAC 6786 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||| | || | |||||||| |||| ||| ||||| ||||||||||| Sbjct 6785 TTCCAGTGTGATAGTCTTGCCAGTCAGTGTCTTTACAAATATTTGCAT 6738 Score = 98.7 bits (108), Expect = 1e-15 Identities = 153/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 142970 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGA 143028 |||| || || || | |||||||| ||||| || || ||||| || ||| | || | Sbjct 6268 CGCAGCACCAAGTGCAAAGTAGATTCCTTTTGAATATTATAATCTGACAGTGTACGTCCA 6209 Query 143029 GTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 143088 ||||| || ||||| || ||| | || || | || || || ||||| ||||||||||| Sbjct 6208 -TCTTCCAGCTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCAGGAGGAATGCCTTCTTT 6150 Query 143089 GTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCAC 143148 ||| ||||||| || | | ||| | || || | | ||| ||||| | || | Sbjct 6149 GTCTTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAATGTGAT 6090 Query 143149 CGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || ||||| |||| ||| ||||| ||||||||||| Sbjct 6089 AGTTTTGCCAGTCAGTGTCTTTACAAATATTTGCAT 6054 Score = 89.7 bits (98), Expect = 5e-13 Identities = 151/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 142970 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGA 143028 |||| || | ||| | |||||||| || || || ||||| || | ||||| || | Sbjct 6724 CGCAGTACCAGATGCAAAGTAGATTCCTTCTGAATATTGTAGTCAGATAGTGTGCGTCCA 6665 Query 143029 GTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 143088 ||||| || || || |||||| | || || | ||||||||| || || ||||| ||||| Sbjct 6664 -TCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGAATGCCCTCTTT 6606 Query 143089 GTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCAC 143148 || |||||| || | | ||| | || || | | ||| ||||| | || | Sbjct 6605 ATCCTGAATTTTCGCCTTAACATTTTCAATTGTATCAGAAGCTTCCACTTCCAATGTGAT 6546 Query 143149 CGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || ||||| |||| ||| ||||| ||||||||||| Sbjct 6545 AGTTTTGCCAGTCAGTGTCTTTACAAATATTTGCAT 6510 Score = 82.4 bits (90), Expect = 8e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 142982 TGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGT 143041 |||| ||||||||||| || || || || || || ||||| | ||||| ||||| Sbjct 7624 TGAAGGGTAGATTCTTTCTGGATATTATAGTCTGACAATGTGCGCCCATCTTCCAGTTGC 7565 Query 143042 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTT 143101 || || || | ||||| | ||| ||||| ||||| |||||||| || || ||| ||| Sbjct 7564 TTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTTATCTTGAATCTTT 7505 Query 143102 TGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTC 143161 || | | ||| | || || | | ||| || || | ||| | || || || ||| Sbjct 7504 GCCTTAACATTTTCTATTGTATCAGAAGCTTCCACCTCCAAAGTGATAGTTTTCCCAGTC 7445 Query 143162 AATGTTTTTACGAATATTTGCAT 143184 | || ||||| || |||||||| Sbjct 7444 AGCGTCTTTACAAAAATTTGCAT 7422 >seq88586 Length=4530 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 ||||| || | || | || | ||| | ||| ||||| ||||| |||||||| || | Sbjct 2179 CCTCCGCGAAGTCGAAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGAC 2238 Query 143018 ATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | ||| | || | ||||| ||||||||||||||| |||||| ||||||||| || || || Sbjct 2239 AATGTACGTCCA-TCTTCTAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTGG 2297 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 || ||||| || || ||||| ||| | | ||| | || || | || || || Sbjct 2298 AATACCTTCCTTATCTTGGATTTTAGCTTTAACATTTTCTATAGTATCAGAGGCCTCCAC 2357 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || | || | || || || || | || || ||||| |||||||| Sbjct 2358 CTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCAT 2405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505508478504480