Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_004313.1 Length=40149 Score E Sequences producing significant alignments: (Bits) Value seq237313 127 5e-25 >seq237313 Length=339 Score = 127 bits (140), Expect = 5e-25 Identities = 140/185 (76%), Gaps = 6/185 (3%) Strand=Plus/Plus Query 38077 CATTACCGCGACAACGCCATTCAGTATAAATCGCAGCGTGATACC---GCCAGTCATAGT 38133 |||||||| || ||||||||| || ||| | ||||| || | ||||| | Sbjct 158 CATTACCGTGATAACGCCATTACCTACAAAGCCCAGCGCGACAAAAATGCCAGAGAA--- 214 Query 38134 CTGACGCTGGCGAACGAGACTATCAGCGATATGGAGGTGCGCCAGCGTGACGTTGCCGCC 38193 |||| ||||||||||| | | || | || ||| || |||| |||||||| ||||| || Sbjct 215 CTGAAGCTGGCGAACGCGGCAATTACTGACATGCAGATGCGTCAGCGTGATGTTGCTGCG 274 Query 38194 CTTGATGCAAGATATACAAAGGAGCTCGCTGATGCGAAAGCTGAGAATGATGCTTTGCGC 38253 || ||||||| ||| || |||||| | |||||||| |||||||| ||||||||| |||| Sbjct 275 CTCGATGCAAAATACACGAAGGAGTTAGCTGATGCTAAAGCTGAAAATGATGCTCTGCGT 334 Query 38254 GATGA 38258 ||||| Sbjct 335 GATGA 339 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127993024464148