Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_004348.1 Length=40679 Score E Sequences producing significant alignments: (Bits) Value seq237382 132 1e-26 seq237313 80.6 7e-11 >seq237382 Length=259 Score = 132 bits (146), Expect = 1e-26 Identities = 111/136 (82%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 18992 AAGAAAGCGTTGAGCGGGCTTTAACGTGCGCTAACTGCGGTCAGAAGCTGCATGTGCTGG 19051 |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 94 AAGAAAGCGTCGAGCGAGCTTTAACGTGCGCTAACTGCGGTCAGAAGCTGCATGTGCTGG 153 Query 19052 AAGTTCACGTGTGCTCCGATTGCTGCGCAGAGTTAATGGCAGACCCTAACGGACAAATGC 19111 ||||||||||||| | ||||||||||| | ||| || || || | |||| Sbjct 154 AAGTTCACGTGTGTGAGCACTGCTGCGCAGAACTGATGAGCGATCCGAATAGCTCGATGC 213 Query 19112 TGGAGGAAGATGATGA 19127 |||||||| ||||| Sbjct 214 ACGAGGAAGAAGATGA 229 Score = 86.0 bits (94), Expect = 2e-12 Identities = 55/60 (92%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 18559 ACCTTCAATTACACGGCTCACCTGTGGGATATCCGGTGGCTTAGAGAACGTGCGAGGAAA 18618 |||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct 1 ACCTTCAACTACACGGCTCACCTGTGGGATATCCGGTGGCTAAGACGTCGTGCGAGGAAA 60 >seq237313 Length=339 Score = 80.6 bits (88), Expect = 7e-11 Identities = 67/82 (82%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 22217 CAATAGCTGACATGCAGAAGCGTCAACGTGACGTAGCGAAGCTCGATGCCAGATACACAA 22276 |||| |||||||||||| |||||| ||||| || || ||||||||| | |||||| | Sbjct 234 CAATTACTGACATGCAGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATACACGA 293 Query 22277 AGGAGCTTGCTGATGCTAACGC 22298 ||||| | ||||||||||| || Sbjct 294 AGGAGTTAGCTGATGCTAAAGC 315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129684238918188