Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25]
237,614 sequences; 309,419,125 total letters
Query= NC_004913.3
Length=59866
Score E
Sequences producing significant alignments: (Bits) Value
seq237382 259 2e-64
seq237313 217 6e-52
>seq237382
Length=259
Score = 259 bits (286), Expect = 2e-64
Identities = 157/166 (95%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 49454 AAGAAAGCGTCGAGCGGGCTTTAACGTGCGCTAACTGCGGTCAGAAGCTGCATGTGCTGG 49513
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 94 AAGAAAGCGTCGAGCGAGCTTTAACGTGCGCTAACTGCGGTCAGAAGCTGCATGTGCTGG 153
Query 49514 AAGTTCACGTGTGTGAGCACTGCTGTGCAGAACTGATGAGCGATCCGAATAGCTCAATGT 49573
||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct 154 AAGTTCACGTGTGTGAGCACTGCTGCGCAGAACTGATGAGCGATCCGAATAGCTCGATGC 213
Query 49574 ACGAGGAAGAAGACGATGGCTAAACCAGCGCGAAGGAAATGCaaaa 49619
||||||||||||| ||||||||||||||||||||| ||| ||||
Sbjct 214 ACGAGGAAGAAGATGATGGCTAAACCAGCGCGAAGACGATGTAAAA 259
Score = 100 bits (110), Expect = 1e-16
Identities = 58/60 (97%), Gaps = 0/60 (0%)
Strand=Plus/Plus
Query 48961 ACCTTCAATTACACGGCTCACCTGTGGGATATCCGGTGGCTAAGACATCGTGCGAGGAAA 49020
|||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1 ACCTTCAACTACACGGCTCACCTGTGGGATATCCGGTGGCTAAGACGTCGTGCGAGGAAA 60
>seq237313
Length=339
Score = 217 bits (240), Expect = 6e-52
Identities = 159/185 (86%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 57499 AACCATTACCGTGACAACGCGCTCACCTACAAAGCGCAGCGCGATAAAAAAGCCAGAGAG 57558
|| ||||||||||| ||||| | ||||||||||| |||||||| ||||| ||||||||
Sbjct 155 AATCATTACCGTGATAACGCCATTACCTACAAAGCCCAGCGCGACAAAAATGCCAGAGAA 214
Query 57559 CTGGAACAGGCGAATGCCACCATTACTGACATGCAGGTGCGCCAGCGTGATGTTGCTGCG 57618
||| | | |||||| || | ||||||||||||||| |||| ||||||||||||||||||
Sbjct 215 CTGAAGCTGGCGAACGCGGCAATTACTGACATGCAGATGCGTCAGCGTGATGTTGCTGCG 274
Query 57619 CTCGATGCAAAATACTCGAGGGAGTTAGCCGATGCGAGAGCTGAAAATGAAACTCTGCGT 57678
||||||||||||||| ||| ||||||||| ||||| | |||||||||||| ||||||||
Sbjct 275 CTCGATGCAAAATACACGAAGGAGTTAGCTGATGCTAAAGCTGAAAATGATGCTCTGCGT 334
Query 57679 GCTGA 57683
| |||
Sbjct 335 GATGA 339
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 190909393125104
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |