Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_004913.3 Length=59866 Score E Sequences producing significant alignments: (Bits) Value seq237382 259 2e-64 seq237313 217 6e-52 >seq237382 Length=259 Score = 259 bits (286), Expect = 2e-64 Identities = 157/166 (95%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 49454 AAGAAAGCGTCGAGCGGGCTTTAACGTGCGCTAACTGCGGTCAGAAGCTGCATGTGCTGG 49513 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 94 AAGAAAGCGTCGAGCGAGCTTTAACGTGCGCTAACTGCGGTCAGAAGCTGCATGTGCTGG 153 Query 49514 AAGTTCACGTGTGTGAGCACTGCTGTGCAGAACTGATGAGCGATCCGAATAGCTCAATGT 49573 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct 154 AAGTTCACGTGTGTGAGCACTGCTGCGCAGAACTGATGAGCGATCCGAATAGCTCGATGC 213 Query 49574 ACGAGGAAGAAGACGATGGCTAAACCAGCGCGAAGGAAATGCaaaa 49619 ||||||||||||| ||||||||||||||||||||| ||| |||| Sbjct 214 ACGAGGAAGAAGATGATGGCTAAACCAGCGCGAAGACGATGTAAAA 259 Score = 100 bits (110), Expect = 1e-16 Identities = 58/60 (97%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 48961 ACCTTCAATTACACGGCTCACCTGTGGGATATCCGGTGGCTAAGACATCGTGCGAGGAAA 49020 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1 ACCTTCAACTACACGGCTCACCTGTGGGATATCCGGTGGCTAAGACGTCGTGCGAGGAAA 60 >seq237313 Length=339 Score = 217 bits (240), Expect = 6e-52 Identities = 159/185 (86%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 57499 AACCATTACCGTGACAACGCGCTCACCTACAAAGCGCAGCGCGATAAAAAAGCCAGAGAG 57558 || ||||||||||| ||||| | ||||||||||| |||||||| ||||| |||||||| Sbjct 155 AATCATTACCGTGATAACGCCATTACCTACAAAGCCCAGCGCGACAAAAATGCCAGAGAA 214 Query 57559 CTGGAACAGGCGAATGCCACCATTACTGACATGCAGGTGCGCCAGCGTGATGTTGCTGCG 57618 ||| | | |||||| || | ||||||||||||||| |||| |||||||||||||||||| Sbjct 215 CTGAAGCTGGCGAACGCGGCAATTACTGACATGCAGATGCGTCAGCGTGATGTTGCTGCG 274 Query 57619 CTCGATGCAAAATACTCGAGGGAGTTAGCCGATGCGAGAGCTGAAAATGAAACTCTGCGT 57678 ||||||||||||||| ||| ||||||||| ||||| | |||||||||||| |||||||| Sbjct 275 CTCGATGCAAAATACACGAAGGAGTTAGCTGATGCTAAAGCTGAAAATGATGCTCTGCGT 334 Query 57679 GCTGA 57683 | ||| Sbjct 335 GATGA 339 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190909393125104