Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25]
237,614 sequences; 309,419,125 total letters
Query= NC_005038.1
Length=99657
Score E
Sequences producing significant alignments: (Bits) Value
seq31223 129 4e-25
seq207359 102 5e-17
seq44559 100 2e-16
seq53127 96.9 2e-15
seq88586 93.3 3e-14
>seq31223
Length=3647
Score = 129 bits (142), Expect = 4e-25
Identities = 161/221 (73%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214
||||| ||||| || | || || |||||||| ||||| || ||||| | | || || |
Sbjct 515 CGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCAGAAAGAGTGCGTCCG 574
Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274
|| ||||||||||||||| || || |||||||| || || | || |||||||| ||
Sbjct 575 TCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTG 634
Query 33275 TCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATC 33334
|| ||| |||||| ||| ||| || ||| |||| ||| |||| ||| ||
Sbjct 635 TCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTAATG 694
Query 33335 GTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTTTAT 33375
||||| |||||||| ||||| || || || ||||| || ||
Sbjct 695 GTTTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTTGAT 735
Score = 98.7 bits (108), Expect = 6e-16
Identities = 161/231 (70%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201
||| |||||||| || | || || ||||| || || |||||||| || || || |||||
Sbjct 46 ACCACCTCTTAAACGAAGTACTAAGTGCAAAGTAGATTCTTTTTGGATGTTATAGTCAGA 105
Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261
|| | | || || |||||||| || ||| || | |||||| || || | ||
Sbjct 106 CAGTGTACGACCATCTTCTAATTGCTTGCCCGCAAAAATAAGACGTTGTTGATCTGGAGG 165
Query 33262 TATGCCTTCTTTTTC---GCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTG 33318
||||||||||| || | | | || ||| || ||| ||| ||||| | ||
Sbjct 166 AATGCCTTCTTTGTCTTGGATTTTAGC---TTTCACATTTTCAATTGTGTCAGAAGCTTC 222
Query 33319 AACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
||| || | ||| || |||||||| || || ||||| || |||||||||||
Sbjct 223 AACTTCTAAAGTAATTGTTTTTCCAGTGAGTGTTTTAACAAAAATTTGCAT 273
>seq207359
Length=487
Score = 102 bits (112), Expect = 5e-17
Identities = 162/231 (70%), Gaps = 6/231 (3%)
Strand=Plus/Minus
Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201
||| |||||||| || | || || ||||| || || |||||||| || ||||| |||||
Sbjct 442 ACCACCTCTTAAACGAAGTACTAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGA 383
Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261
|| | | || || |||||||| || ||| || | |||||| || |||| ||
Sbjct 382 CAGTGTACGACCATCTTCTAATTGCTTGCCCGCAAAAATAAGACGTTGTTGATCCGGAGG 323
Query 33262 TATGCCTTCTTT---TTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTG 33318
||||||||||| || | | | || ||| || ||| ||| ||||| | ||
Sbjct 322 AATGCCTTCTTTGTCTTGGATTTTAGC---TTTCACATTTTCAATTGTGTCAGAAGCTTC 266
Query 33319 AACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
||| || | ||| || |||||||| || || ||||| || || ||||||||
Sbjct 265 AACTTCTAAAGTAATTGTTTTTCCAGTGAGTGTTTTAACAAAGATTTGCAT 215
>seq44559
Length=2984
Score = 100 bits (110), Expect = 2e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 33160 CACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATC 33219
||| || |||| || |||||||| || |||||||||||||||||| || | || ||
Sbjct 645 CACTAAGTGCAGGGTTGACTCTTTCTGAATATTGTAATCAGACAAAGTGCGACCATCTTC 586
Query 33220 CAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCT 33279
||||||||||||| ||| || | ||| || ||||| | ||| ||||| || || ||
Sbjct 585 CAATTGCTTTCCAGCAAAAATGAGACGCTGTTGGTCTGGGGGGATGCCCTCCTTATCCTG 526
Query 33280 AATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTT 33339
|| ||| || | | || ||||| |||| || ||||| || || || ||
Sbjct 525 TATTTTAGCTTTGACATTCTCGATTGTGTCAGATGGTTCTACTTCCAGGGTAATGGTCTT 466
Query 33340 TCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
||| || | ||||| || || ||||||||
Sbjct 465 TCCAGTCAATGTTTTGACAAATATTTGCAT 436
Score = 89.7 bits (98), Expect = 3e-13
Identities = 159/231 (69%), Gaps = 6/231 (3%)
Strand=Plus/Minus
Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201
||| |||| | |||| || ||||| | || ||||||||||| || ||||| |||||
Sbjct 435 ACCACCTCGCAGACGCAGTACTAAATGAAGGGTAGACTCTTTTTGGATGTTGTAGTCAGA 376
Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261
|| || | || || | ||||| ||| ||| || | |||||| || || | |||
Sbjct 375 CAGGGTGCGACCATCTTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGTTGATCTGGGGG 316
Query 33262 TATGCCTTCTTTTTCGCTAATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTG 33318
|| || ||||| || |||| |||| |||| ||| ||| ||||| || |
Sbjct 315 AATACCCTCTTTATCTTGAATCTTAGCCT---TTACATTTTCAATGGTGTCAGATGGCTC 259
Query 33319 AACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| ||||||||||| || || || || || || || || || ||||||||
Sbjct 258 CACCTCCAGAGTTATAGTCTTGCCTGTTAGTGTCTTGACAAATATTTGCAT 208
>seq53127
Length=7988
Score = 96.9 bits (106), Expect = 2e-15
Identities = 160/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 33143 CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGAC 33202
|| ||||||| ||||| || |||||||| || ||||| || || ||||| || || |||
Sbjct 7420 CCACCTCTTAGACGCAAAACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCCGAC 7361
Query 33203 AAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGT 33262
|| || || || |||| |||||||||| || || | | ||| || || | ||
Sbjct 7360 AATGTGCGTCCATCTTCCAGTTGCTTTCCAGCGAAAATCAGTCTTTGTTGATCTGGAGGA 7301
Query 33263 ATGCCTTCTTTTTCGCTAATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGA 33319
|||||||| || || |||| |||| | || ||| || || || | ||
Sbjct 7300 ATGCCTTCCTTATCTTGAATCTTTGCCT---TAACATTTTCTATTGTATCAGAAGCTTCC 7244
Query 33320 ACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| |||| ||| || ||||| || || || || ||||| |||||||||||
Sbjct 7243 ACTTCCAAAGTGATAGTTTTCCCAGTCAGTGTCTTTACAAAAATTTGCAT 7194
Score = 91.5 bits (100), Expect = 9e-14
Identities = 159/230 (69%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 33143 CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGAC 33202
|| ||||||| ||||| || |||||||| || ||||| || || ||||| || || |||
Sbjct 7192 CCACCTCTTAGACGCAAAACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCTGAC 7133
Query 33203 AAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGT 33262
|| || || || |||| ||||||||| || || | | ||| ||||| | ||
Sbjct 7132 AATGTGCGTCCATCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGGTCTGGAGGA 7073
Query 33263 ATGCCTTCTTTTTCGCTAATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGA 33319
|||||||| || || |||| |||| | || ||| || || || | ||
Sbjct 7072 ATGCCTTCCTTGTCTTGAATCTTTGCCT---TAACATTTTCTATTGTATCAGAAGCTTCC 7016
Query 33320 ACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| |||| ||| || ||||| || || | ||||| || |||||||||||
Sbjct 7015 ACTTCCAAAGTGATAGTTTTCCCAGTCAATGTTTTCACAAAAATTTGCAT 6966
Score = 86.0 bits (94), Expect = 4e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 33143 CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGAC 33202
|| ||||| | ||| | || | ||||| || || ||||| || || |||||||||||
Sbjct 6052 CCACCTCTCAGCCGTAGTACTAGGTGCAAAGTAGATTCTTTCTGAATGTTGTAATCAGAT 5993
Query 33203 AAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGT 33262
| || || || || | ||||||||| ||| || | | |||||| || | |||
Sbjct 5992 AGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGA 5933
Query 33263 ATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACG 33322
|| || ||||| || ||| ||| || ||| ||| || || || | |||
Sbjct 5932 ATTCCCTCTTTATCCTGAATTTTTGCTTTAACATTTTCAATTGTATCAGAAGGCTCAACT 5873
Query 33323 TCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|||| ||| || || || || || || || |||||||||||||||||
Sbjct 5872 TCCAAAGTGATAGTCTTGCCAGTCAGTGTCTTTACGAAAATTTGCAT 5826
Score = 84.2 bits (92), Expect = 1e-11
Identities = 158/231 (68%), Gaps = 6/231 (3%)
Strand=Plus/Minus
Query 33143 CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGAC 33202
|| || |||| ||||| || || ||||| || || || || || ||||| || || |||
Sbjct 5824 CCACCCCTTAGACGCAAAACTAAGTGCAAAGTAGATTCCTTCTGGATATTATAGTCTGAC 5765
Query 33203 AAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGT 33262
| || | || |||||||||||||| || |||| | ||| || || | ||
Sbjct 5764 AGTGTGCGCCCATCTTCCAATTGCTTTCCGGCGAAAATTAGTCTTTGTTGATCTGGAGGG 5705
Query 33263 ATGCCTTCTTTTTCGCTAATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGA 33319
|||||||| || || |||| ||| ||||| ||| || || || | ||
Sbjct 5704 ATGCCTTCCTTGTCTTGAATCTTTGCC---TTTACGTTTTCGATTGTATCAGAAGCTTCC 5648
Query 33320 ACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATG 33370
|| |||| || || ||||| || || | |||||||||||| |||||||||
Sbjct 5647 ACTTCCAATGTGATGGTTTTCCCAGTTAAAGTTTTTACGAAGATTTGCATG 5597
>seq88586
Length=4530
Score = 93.3 bits (102), Expect = 3e-14
Identities = 149/213 (70%), Gaps = 6/213 (3%)
Strand=Plus/Plus
Query 33160 CACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATC 33219
||| | ||||||||| || || ||||| || ||||| |||||||| | || || ||
Sbjct 2196 CACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCTTC 2255
Query 33220 CAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTT---TTC 33276
| ||| || ||| ||| || |||||||||||||| | || || ||||| || ||
Sbjct 2256 TAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTG 2315
Query 33277 GCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGT 33336
| | | || ||| || ||| || || || || | || || || || || ||
Sbjct 2316 GATTTTAGC---TTTAACATTTTCTATAGTATCAGAGGCCTCCACCTCGAGGGTAATGGT 2372
Query 33337 TTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
||| |||||||| || || ||||||||||||||
Sbjct 2373 TTTACCCGTAAGGGTCTTGACGAAAATTTGCAT 2405
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 317854445373372
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |