Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_005344.1 Length=39043 Score E Sequences producing significant alignments: (Bits) Value seq237567 468 1e-127 seq237382 435 8e-118 seq237313 313 6e-81 >seq237567 Length=272 Score = 468 bits (518), Expect = 1e-127 Identities = 267/272 (98%), Gaps = 0/272 (0%) Strand=Plus/Plus Query 36279 TTCTACACATGACCTTCGTGAAAGCGGGTGGCATGAGGTTGCGCTAACAACCTCCTGCCG 36338 || |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct 1 TTTTACACATGACCTTCGTGAAAGCGGGTGGCAGGAGGTCGCGCTAACAACCTCCTGCCG 60 Query 36339 CTTTGCCCGTGCATATCGGTCACGAACAAATCTGATTACTAAACACAGTAGCCTGGATTT 36398 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 TTTTGCCCGTGCATATCGGTCACGAACAAATCTGATTACTAAACACAGTAGCCTGGATTT 120 Query 36399 GTTCTATCAGTAATCGACCTTATTCCTAATTAAATAGAGCAAATCCCCTTATTGGGGGTA 36458 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 GTTCTATCAGTAATCGACCTTATTCCTAATTAAATAGAGCAAATCCCCTTATTGGGGGTA 180 Query 36459 AGACATGAAGATGCCAGAAAAACATGACCTGTTAGCCGCCATTCTCGCGGCAAAGGAACA 36518 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 181 AGACATGAAGATGCCAGAAAAACATGACCTGTTGGCCGCCATTCTCGCGGCAAAGGAACA 240 Query 36519 AGGCATCGGGGCAATCCTTGCGTTTGCAATGG 36550 |||||||||||||||||||||||||||||||| Sbjct 241 AGGCATCGGGGCAATCCTTGCGTTTGCAATGG 272 >seq237382 Length=259 Score = 435 bits (482), Expect = 8e-118 Identities = 252/259 (97%), Gaps = 0/259 (0%) Strand=Plus/Plus Query 32550 ACCTTCAATTACACGGCTCACCTGTGGGATATCCGGTGGCTTAGAGAACGTGCGAGGAAA 32609 |||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct 1 ACCTTCAACTACACGGCTCACCTGTGGGATATCCGGTGGCTAAGACGTCGTGCGAGGAAA 60 Query 32610 ACAAGGTGATTGACCAAAATCGAAGTTACGAACAAGAAAGCGTCGAGCGAGCTTTAACGT 32669 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 ACAAGGTGATTGACCAAAATCGAAGTTACGAACAAGAAAGCGTCGAGCGAGCTTTAACGT 120 Query 32670 GTGCTAACTGCGGTCAGAAGCTGCATGTGCTGGAAGTTCACGTGTGTGAGCACTGCTGCG 32729 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 GCGCTAACTGCGGTCAGAAGCTGCATGTGCTGGAAGTTCACGTGTGTGAGCACTGCTGCG 180 Query 32730 CAGAACTGATGAGCGATCCGAATAGCTCGATGCACGAGGAAGAAGACGATGGCTAAACCA 32789 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 181 CAGAACTGATGAGCGATCCGAATAGCTCGATGCACGAGGAAGAAGATGATGGCTAAACCA 240 Query 32790 GCGCGAAGACGATGTAAAA 32808 ||||||||||||||||||| Sbjct 241 GCGCGAAGACGATGTAAAA 259 >seq237313 Length=339 Score = 313 bits (346), Expect = 6e-81 Identities = 257/315 (82%), Gaps = 21/315 (7%) Strand=Plus/Plus Query 37158 CTGGTTATGGTCAGTTCGAGCATAAGGCTGACAGCCTGATTACAAAATTTAAAGAAGCAG 37217 |||||||||||||||||||||| |||||| ||||||||||| ||||||| |||||||| | Sbjct 1 CTGGTTATGGTCAGTTCGAGCAAAAGGCTAACAGCCTGATTGCAAAATTCAAAGAAGCGG 60 Query 37218 GCGGAACGGTCAGAGAGATTGATGTATGAGCAGAGTCACCGCAATTATCTCCGCTCTGGT 37277 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 61 GCGGAACGGTCAGAGAGATTGATGTATGAGCAGAGTCACCGCGATTATCTCCGCTCTGGT 120 Query 37278 TATTTGCATCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAATGCAATCGC 37337 ||| ||||||||||||||||||||||||||||||||||||||||||||||| || || | Sbjct 121 TATCTGCATCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACGCCATTAC 180 Query 37338 CTACAAAGAGCAGCGCGATAAA---GCCACA----TCCATC--------------ATCGC 37376 |||||||| |||||||| ||| |||| | | | | || | Sbjct 181 CTACAAAGCCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTGGCGAACGCGGCAATTAC 240 Query 37377 TGATATGCAGAAGCGGCAACATGATGTAGCAGAACTTGACGCCAGATACACAAAGGAGCT 37436 ||| ||||||| ||| || | |||||| || | || || || | |||||| |||||| | Sbjct 241 TGACATGCAGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATACACGAAGGAGTT 300 Query 37437 TGCTGATGCTAACGC 37451 ||||||||||| || Sbjct 301 AGCTGATGCTAAAGC 315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124463810905340