Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq128178 129 3e-25 seq6152 125 4e-24 seq97171 123 1e-23 seq46610 123 1e-23 seq46609 123 1e-23 seq115124 122 5e-23 seq38374 122 5e-23 seq52792 120 2e-22 seq46607 120 2e-22 seq521 118 6e-22 seq115125 116 2e-21 seq68353 116 2e-21 seq52793 116 2e-21 seq46176 116 2e-21 seq33210 116 2e-21 seq139769 114 7e-21 seq112638 114 7e-21 seq38523 114 7e-21 seq1789 114 7e-21 seq18481 113 2e-20 seq81432 107 1e-18 seq3424 89.7 3e-13 seq102672 87.8 9e-13 >seq128178 Length=1087 Score = 129 bits (142), Expect = 3e-25 Identities = 87/97 (90%), Gaps = 2/97 (2%) Strand=Plus/Plus Query 11437 AATTAATAAAAAATCAAA--TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTAT 11494 |||||||| |||| ||| ||||||||||| |||||||||| ||||||||||||||| Sbjct 563 AATTAATATAAAAGAAAAGTTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTAT 622 Query 11495 TAGCACGACGCTCTRACCAACTGAGCTAATGGGCCGT 11531 |||||||||||||| |||||||||||||||||||||| Sbjct 623 TAGCACGACGCTCTAACCAACTGAGCTAATGGGCCGT 659 >seq6152 Length=14800 Score = 125 bits (138), Expect = 4e-24 Identities = 80/88 (91%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 11443 TAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 |||||| | || ||||||||||| |||||||||| ||||||||||||||||||||||| Sbjct 5507 TAAAAATTAAAGTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGA 5566 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCCG 11530 |||||| ||||||||||||||||||||| Sbjct 5567 CGCTCTAACCAACTGAGCTAATGGGCCG 5594 >seq97171 Length=1980 Score = 123 bits (136), Expect = 1e-23 Identities = 86/97 (89%), Gaps = 1/97 (1%) Strand=Plus/Plus Query 11435 AGAATTAATAAAAAATCAAA-TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTA 11493 |||| |||||||||| | ||||||||||| |||||||||| |||||||||||||| Sbjct 1880 AGAAAAAATAAAAAATATTACTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTA 1939 Query 11494 TTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||||||||||||| ||||||||||||||||||||| Sbjct 1940 TTAGCACGACGCTCTAACCAACTGAGCTAATGGGCCG 1976 >seq46610 Length=1558 Score = 123 bits (136), Expect = 1e-23 Identities = 79/87 (91%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 |||| || | |||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 1131 AAAAGATAACATTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGAC 1072 Query 11504 GCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||| ||||||||||||||||||||| Sbjct 1071 GCTCTAACCAACTGAGCTAATGGGCCG 1045 >seq46609 Length=3451 Score = 123 bits (136), Expect = 1e-23 Identities = 93/109 (85%), Gaps = 2/109 (2%) Strand=Plus/Minus Query 11425 AGGGAAATATAGAATTAA--TAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGA 11482 || |||| || |||| | | ||||| ||||||||||||| |||||||||| ||| Sbjct 2801 AGTGAAAATTAAAATTTAATTTAAAAAGTTAATTGGCCCATGAGGGGATCGAACCCGCGA 2742 Query 11483 CCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCGT 11531 |||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 2741 CCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCCGT 2693 >seq115124 Length=513 Score = 122 bits (134), Expect = 5e-23 Identities = 78/86 (91%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504 ||||| ||| |||||||||| |||||||||| ||||||||||||||||||||||||| Sbjct 240 AAAAAGAAAAGTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACG 181 Query 11505 CTCTRACCAACTGAGCTAATGGGCCG 11530 |||| ||||||||||||||||||||| Sbjct 180 CTCTAACCAACTGAGCTAATGGGCCG 155 >seq38374 Length=1872 Score = 122 bits (134), Expect = 5e-23 Identities = 84/94 (89%), Gaps = 4/94 (4%) Strand=Plus/Plus Query 11441 AATAAAAA-ATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCA 11499 |||||||| ||| ||||||||||| |||||||||| |||||||||||||||||||| Sbjct 423 AATAAAAAGATC---TTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCA 479 Query 11500 CGACGCTCTRACCAACTGAGCTAATGGGCCGTCG 11533 ||||||||| ||||||||||||||||||||| || Sbjct 480 CGACGCTCTAACCAACTGAGCTAATGGGCCGACG 513 >seq52792 Length=1305 Score = 120 bits (132), Expect = 2e-22 Identities = 79/87 (91%), Gaps = 1/87 (1%) Strand=Plus/Plus Query 11443 TAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 |||||||| | ||||||||||| |||||||||| ||||||||||||||||||||||| Sbjct 368 TAAAAAATTGA-TTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGA 426 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||| |||||||||||||||||||| Sbjct 427 CGCTCTAACCAACTGAGCTAATGGGCC 453 >seq46607 Length=272 Score = 120 bits (132), Expect = 2e-22 Identities = 80/90 (89%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 11442 ATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACG 11501 ||||||| | ||||||||||| |||||||||| |||||||||||||||||||||| Sbjct 77 ATAAAAAGTAGTCTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACG 136 Query 11502 ACGCTCTRACCAACTGAGCTAATGGGCCGT 11531 ||||||| |||||||||||||||||||||| Sbjct 137 ACGCTCTAACCAACTGAGCTAATGGGCCGT 166 >seq521 Length=17123 Score = 118 bits (130), Expect = 6e-22 Identities = 80/90 (89%), Gaps = 4/90 (4%) Strand=Plus/Plus Query 11444 AAAAAATCAAA----TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCA 11499 ||||||| ||| ||||||||||| |||||||||| |||||||||||||||||||| Sbjct 5889 AAAAAATTAAAATATTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCA 5948 Query 11500 CGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||| |||||||||||||||||||| Sbjct 5949 CGACGCTCTAACCAACTGAGCTAATGGGCC 5978 Score = 116 bits (128), Expect = 2e-21 Identities = 86/101 (85%), Gaps = 4/101 (4%) Strand=Plus/Plus Query 11429 AAATATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCG 11488 |||||| | || |||||| | ||||||||||| |||||||||| ||||||||| Sbjct 6690 AAATATGTAGATATTAAAAATT----TTGGCCCATGAGGGGATCGAACCCGCGACCTTCG 6745 Query 11489 CGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||||||||||| |||||||||||||||||||| Sbjct 6746 CGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 6786 >seq115125 Length=528 Score = 116 bits (128), Expect = 2e-21 Identities = 71/76 (93%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 ||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 250 TTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 191 Query 11515 CTGAGCTAATGGGCCG 11530 |||||||||||||||| Sbjct 190 CTGAGCTAATGGGCCG 175 >seq68353 Length=459 Score = 116 bits (128), Expect = 2e-21 Identities = 71/76 (93%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 459 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 400 Query 11516 TGAGCTAATGGGCCGT 11531 |||||||||||||||| Sbjct 399 TGAGCTAATGGGCCGT 384 >seq52793 Length=1319 Score = 116 bits (128), Expect = 2e-21 Identities = 71/76 (93%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 11454 ATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCA 11513 |||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||| Sbjct 372 ATTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCA 431 Query 11514 ACTGAGCTAATGGGCC 11529 |||||||||||||||| Sbjct 432 ACTGAGCTAATGGGCC 447 >seq46176 Length=11545 Score = 116 bits (128), Expect = 2e-21 Identities = 75/83 (90%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 11447 AAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCT 11506 |||| | ||||||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct 10431 AAATATATTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCT 10490 Query 11507 CTRACCAACTGAGCTAATGGGCC 11529 || |||||||||||||||||||| Sbjct 10491 CTAACCAACTGAGCTAATGGGCC 10513 >seq33210 Length=2032 Score = 116 bits (128), Expect = 2e-21 Identities = 71/76 (93%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 ||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 1983 TTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 1924 Query 11515 CTGAGCTAATGGGCCG 11530 |||||||||||||||| Sbjct 1923 CTGAGCTAATGGGCCG 1908 >seq139769 Length=268 Score = 114 bits (126), Expect = 7e-21 Identities = 70/75 (93%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 ||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 180 TTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 121 Query 11515 CTGAGCTAATGGGCC 11529 ||||||||||||||| Sbjct 120 CTGAGCTAATGGGCC 106 >seq112638 Length=2857 Score = 114 bits (126), Expect = 7e-21 Identities = 76/84 (90%), Gaps = 1/84 (1%) Strand=Plus/Minus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 ||||||||||| | |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 1141 TTGGCCCATGAGGGTATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 1082 Query 11515 CTGAGCTAATGGGCC-GTCGACGA 11537 ||||||||||||||| || ||||| Sbjct 1081 CTGAGCTAATGGGCCAGTGGACGA 1058 >seq38523 Length=1329 Score = 114 bits (126), Expect = 7e-21 Identities = 86/101 (85%), Gaps = 3/101 (3%) Strand=Plus/Plus Query 11429 AAATATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCG 11488 || |||| || ||| ||| || | |||||||||| |||||||||| ||||||||| Sbjct 657 AATTATAAAAGTAAAAAAGAAGGA---TGGCCCATGAGGGGATCGAACCCGCGACCTTCG 713 Query 11489 CGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||||||||||| |||||||||||||||||||| Sbjct 714 CGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 754 >seq1789 Length=7820 Score = 114 bits (126), Expect = 7e-21 Identities = 77/86 (90%), Gaps = 3/86 (3%) Strand=Plus/Minus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 |||| |||| |||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 856 AAAATATCA---TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGAC 800 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| |||||||||||||||||||| Sbjct 799 GCTCTAACCAACTGAGCTAATGGGCC 774 >seq18481 Length=5063 Score = 113 bits (124), Expect = 2e-20 Identities = 69/74 (93%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 4868 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 4809 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 4808 TGAGCTAATGGGCC 4795 >seq81432 Length=4125 Score = 107 bits (118), Expect = 1e-18 Identities = 77/88 (88%), Gaps = 1/88 (1%) Strand=Plus/Plus Query 11442 ATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACG 11501 |||| |||| || ||||| || || ||||||||| |||||||||||||||||||||| Sbjct 2198 ATAACAAAT-AACTTGGCACAAGAGGAGATCGAACCCGCGACCTTCGCGTTATTAGCACG 2256 Query 11502 ACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||| |||||||||||||||||||| Sbjct 2257 ACGCTCTAACCAACTGAGCTAATGGGCC 2284 >seq3424 Length=17975 Score = 89.7 bits (98), Expect = 3e-13 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 || ||||||| || |||||||||||||||||||||||||| |||||||||||||||||| Sbjct 17310 GGTTCGAACCCGCGTCCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGG 17369 Query 11528 C 11528 | Sbjct 17370 C 17370 >seq102672 Length=451 Score = 87.8 bits (96), Expect = 9e-13 Identities = 50/52 (96%), Gaps = 0/52 (0%) Strand=Plus/Plus Query 11480 CGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCGT 11531 |||||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct 4 CGACCTTCGCGTTATTAGCACGACTCTCTAACCAACTGAGCTAATGGGCCGT 55 Lambda K H 0.638 0.409 0.919 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 260733942240664