Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq13469 125 1e-24 seq258 116 6e-22 >seq13469 Length=38175 Score = 125 bits (138), Expect = 1e-24 Identities = 185/262 (71%), Gaps = 0/262 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 |||||| || ||| | | | || | || ||||||||||| |||||||| |||||||| Sbjct 17204 CGCTAAACGCCATAGAAAAGTACTCAGGGACAACATCCAAGGCATCACCAAACCAGCTAT 17263 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | || | ||||| ||||| ||||| | || || || | || ||||| | Sbjct 17264 AAGAAGATTAGCAAGACGTGGCGGAGTTAAGCGCATTTCCGGTTTAATTTACGAAGAAAC 17323 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | ||||||||||| || || | | || ||| ||||| | ||||| || Sbjct 17324 CCGCGGAGTTTTGAAGATTTTTCTAGAAAATGTCATCAGAGATGCCGTAACTTATACTGA 17383 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||||||| | |||||||| ||| |||||||| | || || || |||||| | ||||| Sbjct 17384 ACACGCTAAAAGGAAGACTGTTACCGCCATGGATGTGGTTTACGCGTTGAAAAGACAAGG 17443 Query 16672 CCGTAAGATTTATGGTTTTGGA 16693 ||| | | ||||| |||||| Sbjct 17444 CCGCACCTTGTATGGATTTGGA 17465 >seq258 Length=4311 Score = 116 bits (128), Expect = 6e-22 Identities = 172/244 (70%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 16464 ACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGC 16523 ||||||| || ||||| ||||| || ||||||||||| || || | || || ||||| | Sbjct 1428 ACATCCAGGGCATCACGAAGCCGGCCATCCGTCGTCTCGCCCGCAGGGGCGGCGTCAAAC 1487 Query 16524 GTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCG 16583 || | || || || | || || |||| ||| | || ||||| | |||||| ||| | Sbjct 1488 GTATATCCGGCCTGATATACGAGGAGACTCGCGGAGTGCTGAAGGTGTTCCTCGAGAATG 1547 Query 16584 TTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGG 16643 | |||| || || || || || |||||||| || | ||||| |||||| |||||| Sbjct 1548 TGATCCGCGACGCCGTCACGTACACGGAGCACGCCAAGAGGAAGACCGTCACCGCCATGG 1607 Query 16644 ATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAATCTT 16703 | |||| || || |||| || || || || | | || || || || |||||| || Sbjct 1608 ACGTCGTGTACGCCCTGAAGCGGCAGGGGCGCACTCTGTACGGCTTCGGCGGTTAATATT 1667 Query 16704 CTAA 16707 ||| Sbjct 1668 TTAA 1671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 78857947856502