Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_006641.1 Length=15959 Score E Sequences producing significant alignments: (Bits) Value seq93 96.9 4e-16 seq15533 78.8 9e-11 >seq93 Length=19155 Score = 96.9 bits (106), Expect = 4e-16 Identities = 172/251 (69%), Gaps = 0/251 (0%) Strand=Plus/Minus Query 685 CACTCAAAGAAAACGTGCTCTGCATCTTCATTGACTCCTGGGCAGGATGGGCACTCTGGG 744 || ||||| || || ||||| || | |||| || ||||| ||||| |||||| Sbjct 3534 CATTCAAAAAATACATGCTCAGCGTTTTCACGCTTACCACGGCAGCTGGGGCATTCTGGG 3475 Query 745 GAATTATCATGCTTGGAGCGGTGGAGATACGCCCGGAAACAGCCGTGTCCTGATAACATC 804 |||| || || || ||||||| | || | ||| | || || || || || | |||| Sbjct 3474 GAATCCTCGTGTTTCAAGCGGTGTAAGTAATCTCGGGAGCAACCATGACCAGAAAGCATC 3415 Query 805 TGTGTAAGATAATAGTTGACCTCACCGTGACTCCGGTTTAGCCAAACGTTGATCCTTGGT 864 || | ||||||||| || |||| | || | |||| |||| | |||| | ||| Sbjct 3414 TGGGCAAGATAATAATTTGTCTCAGCTTGCTTGCGGTAGTGCCATGGTTCGATCTTCGGT 3355 Query 865 ATGAGACGATGCGTCCATCTACCATTCACTGTGGCATCCCACTGTAGTTGCCATCGACTT 924 |||||||||| |||||||| || || || || |||||| |||||||||| Sbjct 3354 ATGAGACGATAGGTCCATCTTCCTTTGTTTGAGGTGTCCCACATCAGTTGCCATCTCTCA 3295 Query 925 ATGCTCCTCCG 935 |||||| |||| Sbjct 3294 ATGCTCTTCCG 3284 >seq15533 Length=6514 Score = 78.8 bits (86), Expect = 9e-11 Identities = 112/158 (71%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 733 GGGCACTCTGGGGAATTATCATGCTTGGAGCGGTGGAGATACGCCCGGAAACAGCCGTGT 792 ||||| |||||||||| || || || || |||| | || | | | |||| | ||| Sbjct 5491 GGGCATTCTGGGGAATCCTCGTGTTTAAAGTGGTGTAAGTAATCTCCGTAACAACTGTGA 5432 Query 793 CCTGATAACATCTGTGTAAGATAATAGTTGACCTCACCGTGACTCCGGTTTAGCCAAACG 852 || || | |||||| |||||||| || || |||||| || | ||||| |||| Sbjct 5431 CCAGAAAGCATCTGGGTAAGATAGTAATTAGTCTCACCATGCTTGCGGTTGTGCCATGTT 5372 Query 853 TTGATCCTTGGTATGAGACGATGCGTCCATCTACCATT 890 | ||| | ||||||||||||| |||||||| || || Sbjct 5371 TCAATCTTCGGTATGAGACGATAGGTCCATCTTCCTTT 5334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 50810418266004