Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_006658.1 Length=30655 Score E Sequences producing significant alignments: (Bits) Value seq4090 114 3e-21 >seq4090 Length=1443 Score = 114 bits (126), Expect = 3e-21 Identities = 348/527 (66%), Gaps = 28/527 (5%) Strand=Plus/Plus Query 4474 AAAAATAATTATGTTATTCACTATAAAAA---TTTGAAACAATGTTTAGATTTA-GGTTT 4529 ||||| || |||||||| || |||| ||| |||| |||||| ||| || ||||| Sbjct 518 AAAAAAAAATATGTTATACATTATAGAAACCTTTTG---CAATGTG-AGAAATATGGTTT 573 Query 4530 ---AGTTCTTAAGAAAATACACCTAGTCTTGAAATTTGAGCAATCAGACTGGCTCAAATC 4586 ||| | | ||| | || ||| || ||||| ||||| | ||| | ||| Sbjct 574 GCGAGTAC---AAAAAGTTCATAGAGTATTAAAATTCAAGCAAAAACCTTGGTTAAAAAA 630 Query 4587 ATATATCGATAAAAATACCGCATGCCGAAAACTAGCTAAGAATGAGTTCGaaaaaaaCTT 4646 |||||| || ||| || || |||| |||| | || || |||||| | || Sbjct 631 ATATATTGAATTAAACACTCAATTACGAACTTTAGCAACATCCGACTTTGAAAAAGATTT 690 Query 4647 TTATAAATTAATGAATAATGCGGTTTTTGGAAAGACGATGGAGAATGTACGAAAATATAA 4706 |||||| | ||||||||| | || ||||||||||| ||||| ||| | |||||| | | Sbjct 691 TTATAAGCTGATGAATAATTCTGTATTTGGAAAGACAATGGAAAATAT-CGAAAAAAGAG 749 Query 4707 -AGATATATATTTAAGAACAAAGTGGCAAAGTCA-------ATACAATGTATCG-GATTT 4757 | | | | ||| |||| | ||| ||| ||| || || || | | || | Sbjct 750 TAAACGTGAAATTATTAACACATTGGGAAAATCATGGAAAAATCAAAGGTGTTGAGAGTC 809 Query 4758 AGTATG-TAGACCAAACTTCCACAGCCTTACAATTTTTGATGAGGATATGGTTATAGTTG 4816 || | | || | |||||||| ||| | |||||| ||| || |||| ||| Sbjct 810 TCATTGCTCGCCCCGAATTCCACAGTCTTTCCATTTTTTCTGAAAATTTGGTCGCAGTCC 869 Query 4817 AACTTAAAAAAGCTAGAGTTTGCTTCAACAAGCCGATCTATGTAGGGTTTAGTATATTAG 4876 ||||| ||| ||| | | | | || ||||| || ||| |||| ||||| ||||||| Sbjct 870 AACTTCGCAAAACTAAATTGTTTTATAATAAGCCCATATATTTAGGTTTTAGCATATTAG 929 Query 4877 ATTTATCTAAAATTTATATTTATGACTTTCATTACAATTATGTTATGCAAAATTATGTAA 4936 | |||| || | || || ||||||||||| || | || ||| ||||| | | | Sbjct 930 AGATATCCAAGACTTTAATGTATGACTTTCACTATCAGTA---CATGAAAAATAAATTTA 986 Query 4937 ATACCTCAAAATTATTGTACACTGACACAGATAGTCTAATTTACCAA 4983 | | |||||| || || ||||| || |||||||| || |||||| Sbjct 987 CCAACATAAAATTGTTATATACTGATACTGATAGTCTGATATACCAA 1033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97697948942156