Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_006949.1 Length=46900 Score E Sequences producing significant alignments: (Bits) Value seq237313 242 1e-59 seq237567 176 1e-39 >seq237313 Length=339 Score = 242 bits (268), Expect = 1e-59 Identities = 188/221 (85%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 45141 TTATCTGCATCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACGCCATCG 45200 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 120 TTATCTGCATCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACGCCATTA 179 Query 45201 CCTACAAAGAGCAGCGCGATACCGTTACTCATA-AGCTGACGCTGGCGAACGCGACAATT 45259 ||||||||| |||||||| | | | || | | |||| ||||||||||||| ||||| Sbjct 180 CCTACAAAGCCCAGCGCGACAAAAATGC-CAGAGAACTGAAGCTGGCGAACGCGGCAATT 238 Query 45260 ACCGACATGACGAAGCGTCAGCGTGATGTTGCCGACCTCGATGCAAGATATATAAAGGAA 45319 || |||||| || |||||||||||||||||| | |||||||||| ||| | ||||| Sbjct 239 ACTGACATGCAGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATACACGAAGGAG 298 Query 45320 TTAGCCGATGCGAAAGCTGAGAATGATGCTTTGCGCGATGA 45360 ||||| ||||| |||||||| ||||||||| |||| ||||| Sbjct 299 TTAGCTGATGCTAAAGCTGAAAATGATGCTCTGCGTGATGA 339 >seq237567 Length=272 Score = 176 bits (194), Expect = 1e-39 Identities = 201/264 (76%), Gaps = 11/264 (4%) Strand=Plus/Plus Query 44195 TTCGTGAAGATGGGTGGCAAGAGACCGCGCTAACAGCCTCTTGCCTGATCTGCCCATGC- 44253 |||||||| |||||||| ||| |||||||||| |||| |||| | | ||||| ||| Sbjct 15 TTCGTGAAAGCGGGTGGCAGGAGGTCGCGCTAACAACCTCCTGCC-GTTTTGCCCGTGCA 73 Query 44254 TCTTAATCACGGACAAACCACGTTACCGCAAAATGTATCCTGGATTTGTTCTTTCCAATA 44313 | | ||||| ||||| | |||| | | ||| |||||||||||||| || | Sbjct 74 TATCGGTCACGAACAAATCTGATTACTAAACACAGTAGCCTGGATTTGTTCTATCAGTAA 133 Query 44314 TCAACCA-ATTCATAAC---ATTGAACAAATCCTCACGGTCGTGAGGTAAGACATGAAAA 44369 || ||| |||| ||| || || ||||||| | | | | |||||||||||| Sbjct 134 TCGACCTTATTCCTAATTAAATAGAGCAAATCCCCTTATTGGGG--GTAAGACATGAA-- 189 Query 44370 AGATGCCAGAAAAACATGATCTGTTAACCGCCATGATGGCGGCAAAGGAACAGGGCATCG 44429 |||||||||||||||||| ||||| ||||||| | |||||||||||||| ||||||| Sbjct 190 -GATGCCAGAAAAACATGACCTGTTGGCCGCCATTCTCGCGGCAAAGGAACAAGGCATCG 248 Query 44430 GGGCAATCCTTGCGTTTGCAATGG 44453 |||||||||||||||||||||||| Sbjct 249 GGGCAATCCTTGCGTTTGCAATGG 272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149535267443816