Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25]
237,614 sequences; 309,419,125 total letters
Query= NC_006949.1
Length=46900
Score E
Sequences producing significant alignments: (Bits) Value
seq237313 242 1e-59
seq237567 176 1e-39
>seq237313
Length=339
Score = 242 bits (268), Expect = 1e-59
Identities = 188/221 (85%), Gaps = 2/221 (1%)
Strand=Plus/Plus
Query 45141 TTATCTGCATCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACGCCATCG 45200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 120 TTATCTGCATCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACGCCATTA 179
Query 45201 CCTACAAAGAGCAGCGCGATACCGTTACTCATA-AGCTGACGCTGGCGAACGCGACAATT 45259
||||||||| |||||||| | | | || | | |||| ||||||||||||| |||||
Sbjct 180 CCTACAAAGCCCAGCGCGACAAAAATGC-CAGAGAACTGAAGCTGGCGAACGCGGCAATT 238
Query 45260 ACCGACATGACGAAGCGTCAGCGTGATGTTGCCGACCTCGATGCAAGATATATAAAGGAA 45319
|| |||||| || |||||||||||||||||| | |||||||||| ||| | |||||
Sbjct 239 ACTGACATGCAGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATACACGAAGGAG 298
Query 45320 TTAGCCGATGCGAAAGCTGAGAATGATGCTTTGCGCGATGA 45360
||||| ||||| |||||||| ||||||||| |||| |||||
Sbjct 299 TTAGCTGATGCTAAAGCTGAAAATGATGCTCTGCGTGATGA 339
>seq237567
Length=272
Score = 176 bits (194), Expect = 1e-39
Identities = 201/264 (76%), Gaps = 11/264 (4%)
Strand=Plus/Plus
Query 44195 TTCGTGAAGATGGGTGGCAAGAGACCGCGCTAACAGCCTCTTGCCTGATCTGCCCATGC- 44253
|||||||| |||||||| ||| |||||||||| |||| |||| | | ||||| |||
Sbjct 15 TTCGTGAAAGCGGGTGGCAGGAGGTCGCGCTAACAACCTCCTGCC-GTTTTGCCCGTGCA 73
Query 44254 TCTTAATCACGGACAAACCACGTTACCGCAAAATGTATCCTGGATTTGTTCTTTCCAATA 44313
| | ||||| ||||| | |||| | | ||| |||||||||||||| || |
Sbjct 74 TATCGGTCACGAACAAATCTGATTACTAAACACAGTAGCCTGGATTTGTTCTATCAGTAA 133
Query 44314 TCAACCA-ATTCATAAC---ATTGAACAAATCCTCACGGTCGTGAGGTAAGACATGAAAA 44369
|| ||| |||| ||| || || ||||||| | | | | ||||||||||||
Sbjct 134 TCGACCTTATTCCTAATTAAATAGAGCAAATCCCCTTATTGGGG--GTAAGACATGAA-- 189
Query 44370 AGATGCCAGAAAAACATGATCTGTTAACCGCCATGATGGCGGCAAAGGAACAGGGCATCG 44429
|||||||||||||||||| ||||| ||||||| | |||||||||||||| |||||||
Sbjct 190 -GATGCCAGAAAAACATGACCTGTTGGCCGCCATTCTCGCGGCAAAGGAACAAGGCATCG 248
Query 44430 GGGCAATCCTTGCGTTTGCAATGG 44453
||||||||||||||||||||||||
Sbjct 249 GGGCAATCCTTGCGTTTGCAATGG 272
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 149535267443816
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |