Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq24004 156 1e-32 >seq24004 Length=11461 Score = 156 bits (172), Expect = 1e-32 Identities = 986/1566 (63%), Gaps = 36/1566 (2%) Strand=Plus/Plus Query 363592 CCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTT 363651 |||||| | || || || || ||| || ||||| |||||| ||| || ||||||||| Sbjct 8384 CCACAGCTTTCCTCCTGTTTCCTTATAGCTATGAAAGACGATAGCATTGAAGGTATCTTT 8443 Query 363652 GACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATC 363711 || || | || | ||||| | ||||| || ||| || || || ||| || || Sbjct 8444 GATACTTTAAAACAATGTGCATTAATTTCTAAATCTGCTGGTGGCATAGGTTTA--CATA 8501 Query 363712 CACAATG--TTCGTGCACAGAACAGTTACATTCGCGGCAC-AGGGGGATACTCGAATGGG 363768 |||| || | | || ||| |||||| ||||| | ||| | ||| ||||| Sbjct 8502 CACATTGCATCAGAGCTCAGGGTTCTTACATAGCTGGCACTAATGGGGT-CTCAAATGGT 8560 Query 363769 CTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGA 363828 || || || ||| | | |||| | |||||||||| || || || || || |||||| Sbjct 8561 CTAGTGCCAATGTTGAGAGTGTATAACAATACTGCCAGATATGTAGATCAAGGTGGAAAC 8620 Query 363829 AAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTT 363888 || || || || ||||| || ||| | |||||| ||||| ||||| ||||| || Sbjct 8621 AAACGTCCCGGCGCATTTGCAATTTATTTAGAGCCTTGGCATGCGGATATATTTGAATTC 8680 Query 363889 CTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCA 363948 | || | ||| ||||| || || || ||| || | || | || ||||| ||||| Sbjct 8681 TTGGATTTAAAGAAGAACACAGGTAAGGAAGAAATGAGAGCTAGAGAACTGTTTTATGCT 8740 Query 363949 CTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAA--TTGGTCACTCT 364006 | ||| | | || | |||||||| | || || | | | ||| |||| ||| Sbjct 8741 TTATGGATACCAGATCTGTTTATGAAAAGAGT--AGAAAAGGATGAAGTTTGGAGTCTCA 8798 Query 364007 TTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTAT 364066 | || || || || ||||| || || | || | || || || | || | |||| Sbjct 8799 TGTGTCCTCATGATTGTCCTGGCCTCGCTGACTGCTTTGGAGAGGAATTTGACGAACTAT 8858 Query 364067 ACGAAAAGTATGAATCGGAGGGAAA-GGCTCGTAAGACAATTC-CCGCACAGAAGCTATG 364124 | | || |||||| | || ||| | | ||| |||| || || || || |||| Sbjct 8859 ATGCCAAATATGAA--GAAGAAAAACGATTTATAAAACAAGTCAGAGCTCAAGAGTTATG 8916 Query 364125 GTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTC 364184 | | || || || | || | ||||| || ||||| || |||||||| || ||| | Sbjct 8917 GAAGTCAATTATAGAAGCCCAAGTGGAGACTGGTACACCATACATGTTGTATAAGGATGC 8976 Query 364185 GTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTAC 364244 || ||| | ||| || || | | ||||| || ||| | ||||| || || || Sbjct 8977 TTGTAACAGAAAGAGTAATCAAAAAAATCTTGGCACTATTAAATGTAGCAATCTTTGCAC 9036 Query 364245 CGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGC 364304 ||| || | ||||||| | || || || || || |||||||| || || || Sbjct 9037 TGAGGTTGTGCAATACACTTCAGAAGATGAAGTGGCAGTGTGCAACCTTGCTTCCATAGC 9096 Query 364305 GCTTCCGGCGTTTGTAAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTA 364364 ||| |||||| || || | ||| | | | | | || | || | Sbjct 9097 ACTTAACATGTTTGTTGAAAATAACAGATTTAATTTTAAAAAATTAAAAGAAATCACAAA 9156 Query 364365 TCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC 364424 || ||| ||| | |||| ||||| || |||| |||||| | |||||||| Sbjct 9157 GATTGTAACTCAAAATTTAAACAAAGTTATTGATGTTAATTTTTATCCTGTCCCTGAAGC 9216 Query 364425 CGAGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGT 364484 | ||| |||||| | ||| | || |||||| ||||||| |||||| | || || | Sbjct 9217 AAAAACTTCAAATATGAGACATAGACCTATTGGTATTGGTGTTCAGGGCATGGCAGATGC 9276 Query 364485 TTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGAT 364544 ||| || || | | || | | || | || |||| ||| | | || Sbjct 9277 GTTTGTGTTGATGAGAATATCTTACGAAAGTGAGAAAGCAATACTTCTCAATCAACAAAT 9336 Query 364545 CTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGC-AAAAACCAAGG 364603 ||||||||||| |||| || ||| | ||| ||||| || || |||| |||| Sbjct 9337 ATTTGAAACAATTTATTATGGTGCATTAGAAGCTAGTTGTGAATTAGCTGAAAAAGAAGG 9396 Query 364604 GAAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTAT 364663 | ||| || ||| | ||| || || || | |||||| |||| | | Sbjct 9397 TGCA-TACAGCACATATCAAGGGAGTCCAGCAAGCCAAGGTATCCTCCAGTATGATATGT 9455 Query 364664 GGAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCT--ACGTTCCAACGTTA-AGA 364720 || | || || | | || ||| |||||| | || | | || | || | Sbjct 9456 GGGACAAAACTCCTACAGACCTTTGGGACTGGGCTGTCCTTAAAG---AAAAGATAGCAA 9512 Query 364721 AGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGA 364780 | |||||| ||||| || || | | ||| || ||||| || || ||||||||||| | Sbjct 9513 AACATGGTTTGCGCAATTCTCTATTGATAGCTCCTATGCCGACTGCCTCTACTGCACAAA 9572 Query 364781 TCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTC 364840 | || || |||| || | || ||||| |||||| ||| |||| | | | || Sbjct 9573 TTCTTGGCAACACTGAATCTTTTGAACCCTTTACATCAAATATTTACCAAAGAAGAGTCT 9632 Query 364841 TTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGC 364900 | || ||||||||||| ||||| || | | || | | ||| | || | ||||| Sbjct 9633 TATCTGGAGAATTTCCTGTAGTGAACCATCATCTTCTGACTGATTT----GA-CTCGGGC 9687 Query 364901 -----TGTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAA 364955 |||||| |||| ||||| || ||| || | ||||| ||| | || | Sbjct 9688 TGATTTGTGGGATGACGATATGAAAAATCTTATTATATACAACAATGGATCTATACAAGA 9747 Query 364956 CATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCAT 365015 ||| | | |||| |||| | | | | ||||||||||||||||| ||||| | Sbjct 9748 AATTGAAAAAATTCCTAAAGAAATAAGAGATTTGTACAAAACCGTATGGGAGATTTCACT 9807 Query 365016 GCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTT 365075 | ||| ||| | ||||| || ||| | || |||||||| || || || || || Sbjct 9808 GAAAACATCCATACAGATGGCAGCTGATAGAGGAGCTTTTATAGACCAAAGTCAATCTTT 9867 Query 365076 TAACGTATTCATG--ACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGG 365133 |||| || |||| || | || | || | || ||||| || || |||||| ||| Sbjct 9868 TAAC--ATACATGTTGCTAAACCTAACTATGGAAAACTTACGTCGATTCATTTCCACGCT 9925 Query 365134 TGGAAA 365139 |||||| Sbjct 9926 TGGAAA 9931 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1299385632014148