Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq21383 221 1e-52 seq45806 150 2e-31 seq31223 118 9e-22 seq207359 109 5e-19 seq88586 96.9 3e-15 seq44559 93.3 4e-14 seq53127 91.5 1e-13 >seq21383 Length=8822 Score = 221 bits (244), Expect = 1e-52 Identities = 525/785 (67%), Gaps = 19/785 (2%) Strand=Plus/Plus Query 32176 TGCGTATTTTGTAGAATGGGGCGTGTACGGGCGCAATTTCCCAATAGACAAAGTGCCGTT 32235 ||| || || ||||||||||| || || | || ||||| | || | || | Sbjct 1093 TGCCTACTTCGTAGAATGGGGTGTCTATCCTAGGAAATTCCCCGTGGATCGTATACCTAT 1152 Query 32236 GCCCAATTTGTCGCATCTGTTGTACGGATTTATTCCTATTTGCGGCGGCGACGGACTAAA 32295 || ||| | | ||| || | ||||| |||||||| ||||||||||| ||||| | || Sbjct 1153 ACCTAATCTTACTCATTTGCTCTACGGCTTTATTCCAATTTGCGGCGGTGACGGCATCAA 1212 Query 32296 CGATGCCCTCAAAACGATACCGGGCAGTTTTGAGGCGCTGCAACGTTCGTGCAAAGGCCG 32355 ||| | ||| ||| |||||||| | || || || || || || | ||||| Sbjct 1213 TGATAGTTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTACAGCGATCCTGTAGCGGCCG 1272 Query 32356 CGCAGACTTTAAGGTTGCCATTCACGACCCTTGGGCCGCAATACAAAAACCGCAGAAGGG 32415 | ||||| || || | || ||||| || ||||| ||| |||||||||| || || || Sbjct 1273 TGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAAAAAGG 1332 Query 32416 CGTGTCTGCGTGGAACGAACCCTACAAAGGCAACTTTGGCCAATTGATGGCGGCCAAGTT 32475 ||||| | |||||||| |||||||||||||||||||||||||| ||| | || Sbjct 1333 ATTGTCTTCATGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTAATGTCACTAAAACA 1392 Query 32476 GGCAAACCCTCACATAAAAATTTTACCATCTATTGGCGGGTGGACGTTGTCGGATCC--- 32532 || |||| | | || ||| | ||||||||||| ||||||||| | | ||||| Sbjct 1393 AGCCCGCCCTGAATTGAAGATTCTTCCATCTATTGGTGGGTGGACGCTTGCCGATCCTTT 1452 Query 32533 CTTTTATTTTATGCACGACGCGGAAAAACGGCACGTGTTTGTCGATTCCGTCAAAGAGTT 32592 ||| | ||| | || | | || | |||| ||||| | || || || ||||| Sbjct 1453 CTTCTTTTTAGTTGACAAATC--TAAGAGAACACG-ATTTGTGCAGTCAGTAAAGGAGTT 1509 Query 32593 TTTACAGGTTTGGAAATTCTTTGACGGAGTGGACATTGATTGGGAGTTCCCGGGCGGCAA 32652 | | | ||||||||||| || || || || || |||||||||||||| || ||||| Sbjct 1510 TCTTCTAACATGGAAATTCTTCGATGGTGTTGATATCGATTGGGAGTTCCCTGGTGGCAA 1569 Query 32653 AGGTGCCAACCCGGCGCTCGGTAACGGGGAGCGCGACGCGCACACGTACATTATTTTGTT 32712 |||||| ||||| | ||||||| | || || | | || | | |||| | Sbjct 1570 AGGTGCTAACCCTGACCTCGGTAGCCCAGA---AGATGGTGATTGTTATGTAAGTTTGAT 1626 Query 32713 ACAAGAATTGCGTTCTATGCTGGACGACCT-TCAATTGCAAACGGGCAAAACGTACGAGT 32771 ||||||| ||| |||||||| || || ||| | | | || || | ||||| | Sbjct 1627 GAAAGAATTACGTGAGATGCTGGATGAGCTCTCAGCT-AAGAATGGTAAGAAATACGAAT 1685 Query 32772 TGACTAGCGCAATTAGTGCCGGCCACGACAAAATTGCTGTGGTGCAATATGAAGCCGCGC 32831 | ||| || |||||||| || || ||||| || || | || | || | Sbjct 1686 TAACTTCTGCTATTAGTGCTGGATGGGATAAAATCCAAGTTGTTGACTACGGCAAAGCTC 1745 Query 32832 AAAAGTACCTCGATAAAATATTTCTCATGAGTTACGACTTTAAAGGGGCATGGTCTAACA 32891 |||| || | ||| | || || | |||||||||||||| || || || ||||| || Sbjct 1746 AAAATTATATGGATCATATTTTCTTGATGAGTTACGACTTCAAGGGAGCCTGGTCAAA-- 1803 Query 32892 CCGAT----TTGGGCTATCAGACCACTTTGTACGCTCCAAGTTGGAATCCCGATGAATTG 32947 ||| |||| | |||| || | |||||||| || ||||||||| | ||| Sbjct 1804 -TGATACTCTTGGAC-ATCAAACGCCATTGTACGCGCCTGCGTGGAATCCCAAGGAAACT 1861 Query 32948 TACAC 32952 ||||| Sbjct 1862 TACAC 1866 >seq45806 Length=6479 Score = 150 bits (166), Expect = 2e-31 Identities = 180/242 (74%), Gaps = 2/242 (1%) Strand=Plus/Plus Query 109259 TGCGCA-CTTTTGCAGAATGGCCTCGTGGTTTGAAACAGCAACCCGATAAACTAGCCGAG 109317 |||||| ||| || || |||||||| || |||| ||| | || || |||| ||||| Sbjct 5121 TGCGCAGCTTCAGC-GACTGGCCTCGCAGTATGAAGCAGAAGCCTGAGGAACTCGCCGAA 5179 Query 109318 GCCGGGTTTTATTACACGGGCCAGGGCGATAAAACCAAATGTTTTTATTGTGACGGCGGT 109377 || || || | ||||| |||||||| || ||||| || || || || ||||||||||| Sbjct 5180 GCGGGATTCTTCTACACCGGCCAGGGTGACAAAACTAAGTGCTTCTACTGTGACGGCGGA 5239 Query 109378 TTGAAAGACTGGGAGGCGGACGATGAGCCGTGGAAACTGCACGCGCGTTGGTTTGACCGT 109437 | || ||||||||| ||||| | ||||||| | | ||||||||| ||||| ||||| Sbjct 5240 CTCAAGGACTGGGAGAACGACGACGTGCCGTGGGAGCAGCACGCGCGCTGGTTCGACCGG 5299 Query 109438 TGCCCTTACGTGTTGCTTGTTAAGGGTCGAGATTATGTGCAAAAAATTGTAACGGAATCG 109497 ||| | |||||| ||| || || || ||||| || || || || | | |||||| || Sbjct 5300 TGCGCCTACGTGCAGCTGGTCAAAGGCCGAGAGTACGTCCAGAAGGTGATCACGGAAGCG 5359 Query 109498 TG 109499 || Sbjct 5360 TG 5361 Score = 87.8 bits (96), Expect = 2e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 109048 GGATTTTATTATTTGGGTCGCGGCGACGAAGTGCGCTGCGCGTTTTGCAAAGTGGAAATA 109107 || || |||||| |||| |||||||| ||||| |||||||||||||| ||||| ||||| Sbjct 4835 GGCTTCTATTATCTGGGCCGCGGCGATGAAGTACGCTGCGCGTTTTGTAAAGTAGAAATT 4894 Query 109108 ATGCGTTGGCTTGAGGGTGACGACCCAGCGGTTGACCATAAAAGATTAGCGCCACAGTGT 109167 ||| ||| ||| ||| ||||| || || ||||| | | | ||||| ||||| Sbjct 4895 ATGAAATGGGTTGCGGGCGACGATCCCGCCAAGGACCACCAGCGCTGGGCGCCTCAGTGC 4954 Query 109168 CCGTTC 109173 || ||| Sbjct 4955 CCTTTC 4960 >seq31223 Length=3647 Score = 118 bits (130), Expect = 9e-22 Identities = 145/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||||||||| ||||| ||||| |||||||| ||||| | ||| || | Sbjct 273 ATGCAAATTTTTGTTAAAACACTCACTGGAAAAACAATTACTTTAGAAGTTGAAGCTTCT 214 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| ||| | | || ||| ||||| || ||||||||| | || ||||| Sbjct 213 GACACAATTGAAAATGTGAAAGCTAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCAA 154 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 ||| | ||||||| ||||||||| ||||||||||||| || || | || |||||| Sbjct 153 CAACGTCTTATTTTTGCGGGCAAGCAATTAGAAGATGGTCGTACACTGTCTGACTATAAC 94 Query 115466 ATTCAAAAAGAGTCTACT 115483 || |||||||| |||||| Sbjct 93 ATCCAAAAAGAATCTACT 76 Score = 95.1 bits (104), Expect = 1e-14 Identities = 170/247 (69%), Gaps = 1/247 (0%) Strand=Plus/Minus Query 115269 TTTATAAGAGAT-TAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACC 115327 ||| | | |||| | |||||||| || ||||| ||||| || ||||| ||||||||||| Sbjct 747 TTTGTTACAGATATCAAAATGCAGATCTTTGTGAAAACACTTACGGGTAAAACCATTACT 688 Query 115328 GTCGAAACGGAGTCCAGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAA 115387 | ||| || | ||| ||| ||| | | |||||| |||||| || || ||| Sbjct 687 TTGGAAGTTGAACCTTCCGATACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAGGAA 628 Query 115388 GGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAA 115447 ||| | || ||||| ||| | | |||| || || || ||||| ||||| | Sbjct 627 GGCATTCCTCCAGATCAACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGACGC 568 Query 115448 ACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGA 115507 || | | || ||||| ||||||||||| |||||| | || |||| ||| | | || Sbjct 567 ACTCTTTCTGACTATAATATTCAAAAAGAATCTACTCTTCACTTGGTATTGCGTCTTCGT 508 Query 115508 GGAGGAA 115514 || |||| Sbjct 507 GGTGGAA 501 Score = 84.2 bits (92), Expect = 2e-11 Identities = 147/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||| || ||||| || || || || ||||||||||| || | || ||| | Sbjct 502 AATGCAGATCTTTGTTAAGACTCTTACAGGAAAAACCATCACTTTAGAGGTAGAGCCGTC 443 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||||| | | | | || || ||| || || ||||| || | ||| ||||| Sbjct 442 CGACACTATCGAAAATGTGAAGGCAAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCA 383 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 || || ||||||| ||| || |||||| | ||||||| | || | | |||||||| Sbjct 382 ACAGAGGCTTATTTTTGCTGGAAAACAACTGGAAGATGGCCGTACATTATCTGATTATAA 323 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498 |||||||| || || || ||||| | || ||| Sbjct 322 TATTCAAAAGGAATCGACCCTACATTTAGTATTG 289 >seq207359 Length=487 Score = 109 bits (120), Expect = 5e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| ||||| ||||| ||||| |||||||| ||||| | ||| || | Sbjct 215 ATGCAAATCTTTGTTAAAACACTCACTGGAAAAACAATTACTTTAGAAGTTGAAGCTTCT 274 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| ||| | | || ||| ||||| || ||||||||| | || ||||| Sbjct 275 GACACAATTGAAAATGTGAAAGCTAAAATCCAAGACAAAGAAGGCATTCCTCCGGATCAA 334 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 ||| | ||||||| ||||||||| ||||||||||||| || || | || || ||| Sbjct 335 CAACGTCTTATTTTTGCGGGCAAGCAATTAGAAGATGGTCGTACACTGTCTGACTACAAC 394 Query 115466 ATTCAAAAAGAGTCTACT 115483 || |||||||| |||||| Sbjct 395 ATCCAAAAAGAATCTACT 412 >seq88586 Length=4530 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||||||||| ||||| || || ||||| |||||||||||| |||| |||| || Sbjct 2406 AATGCAAATTTTCGTCAAGACCCTTACGGGTAAAACCATTACCCTCGAGGTGGAGGCCTC 2347 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || ||| | | | | || ||| ||||| ||||| ||||| | || || || Sbjct 2346 TGATACTATAGAAAATGTTAAAGCTAAAATCCAAGATAAGGAAGGTATTCCACCAGACCA 2287 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||| | | || | ||| || |||||| ||||||||| || || | || || || Sbjct 2286 GCAACGTTTGATCTTTGCTGGTAAACAACTAGAAGATGGACGTACATTGTCTGACTACAA 2227 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAAA 115515 ||||||||| || || || | ||| | ||| | || | || ||||| || Sbjct 2226 CATTCAAAAGGAATCCACATTGCATCTTGTGCTTCGACTTCGCGGAGGTAA 2176 >seq44559 Length=2984 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| |||||||| || || || || || || || || | || |||| ||| | Sbjct 208 ATGCAAATATTTGTCAAGACACTAACAGGCAAGACTATAACTCTGGAGGTGGAG-CCATC 266 Query 115346 -GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| ||| | | ||||| || ||| |||||||| || | ||| ||||| Sbjct 267 TGACACCATTGAAAATGTAAAGGCTAAGATTCAAGATAAAGAGGGTATTCCCCCAGATCA 326 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| | ||||| | ||| ||||| || ||||||||| ||| || | || || || Sbjct 327 ACAACGTCTTATCTTTGCTGGCAAGCAGCTAGAAGATGGTCGCACCCTGTCTGACTACAA 386 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||| |||||||||||||| | ||| | || || | ||||||| || Sbjct 387 CATCCAAAAAGAGTCTACCCTTCATTTAGTACTGCGTCTGCGAGGTGG 434 >seq53127 Length=7988 Score = 91.5 bits (100), Expect = 1e-13 Identities = 143/201 (71%), Gaps = 4/201 (2%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||||||||| || || || || || || || || || || | ||| ||| | Sbjct 5825 AATGCAAATTTTCGTAAAGACACTGACTGGCAAGACTATCACTTTGGAAGTTGAGCCTTC 5884 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || || ||| | | || ||| ||||||| |||||||| || | ||| ||||| Sbjct 5885 TGATACAATTGAAAATGTTAAAGCAAAAATTCAGGATAAAGAGGGAATTCCCCCAGATCA 5944 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGAT-GAC-AAAACCATGGCCGATTAT 115462 |||||||||||||| ||| || || || | |||||| ||| | || || | ||||| Sbjct 5945 GCAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGCACACTAT--CTGATTAC 6002 Query 115463 AACATTCAAAAAGAGTCTACT 115483 |||||||| ||||| |||||| Sbjct 6003 AACATTCAGAAAGAATCTACT 6023 Score = 89.7 bits (98), Expect = 4e-13 Identities = 161/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 ||||||||||||||| || || || || || || || || || | ||| ||| | Sbjct 6281 AATGCAAATTTTTGTTAAGACACTGACTGGCAAGACTATCACTTTGGAAGTGGAAGCTTC 6340 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || || ||| | | || ||| ||||||| |||||||| || | ||| ||||| Sbjct 6341 TGATACAATTGAAAATGTTAAAGCAAAAATTCAGGATAAAGAGGGTATTCCCCCAGATCA 6400 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGAT-GAC-AAAACCATGGCCGATTAT 115462 |||||||||||||| ||| || || || | |||||| ||| | || || | || || Sbjct 6401 GCAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGCACACTAT--CTGACTAC 6458 Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 || ||||| || || || ||| | || |||| || | ||| |||| |||| Sbjct 6459 AATATTCAGAAGGAATCAACTTTGCACCTGGTACTGCGGTTGAGAGGTGGAA 6510 Score = 89.7 bits (98), Expect = 4e-13 Identities = 161/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 ||||||||| ||||| || || || || || ||||| || || | ||| ||| | Sbjct 6509 AATGCAAATATTTGTAAAGACACTGACTGGCAAAACTATCACATTGGAAGTGGAAGCTTC 6568 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || || ||| | | || || |||||| |||||||| ||| | ||| ||||| Sbjct 6569 TGATACAATTGAAAATGTTAAGGCGAAAATTCAGGATAAAGAGGGCATTCCCCCAGATCA 6628 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGAT-GAC-AAAACCATGGCCGATTAT 115462 |||||||||||||| ||| || || || | |||||| ||| | || || | || || Sbjct 6629 GCAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGCACACTAT--CTGACTAC 6686 Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 || ||||| || || |||||| | ||| |||| || | || |||| |||| Sbjct 6687 AATATTCAGAAGGAATCTACTTTGCATCTGGTACTGCGGCTGAGAGGTGGAA 6738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424112237537680