Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25]
237,614 sequences; 309,419,125 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq21383 183 3e-41
seq24004 158 1e-33
seq88586 116 3e-21
seq44559 105 6e-18
seq1324 86.0 6e-12
seq45806 84.2 2e-11
>seq21383
Length=8822
Score = 183 bits (202), Expect = 3e-41
Identities = 336/492 (68%), Gaps = 8/492 (2%)
Strand=Plus/Plus
Query 23643 GCCTACTTTGTCGAGTGGGGCGTATATCCCAGACAATTTCCCGTAGACAAAGTGCCCGTG 23702
|||||||| || || ||||| || ||||| || |||| ||||| || | || |
Sbjct 1094 GCCTACTTCGTAGAATGGGGTGTCTATCCTAGGAAATTCCCCGTGGATCGTATACCTATA 1153
Query 23703 CCTAATTTGTCACATTTGCTCTACGGCTTCGTACCTATATGCGGCGGCGAGGGAATTAAC 23762
|||||| | | ||||||||||||||||| | || || |||||||| || || || ||
Sbjct 1154 CCTAATCTTACTCATTTGCTCTACGGCTTTATTCCAATTTGCGGCGGTGACGGCATCAAT 1213
Query 23763 GACGCTCTCAAAACCGTGCCGGGCAGTTTCGAGGCGCTGCAGCGTTCGTGCGCGGGCCGC 23822
|| | | ||| | ||||||||| | || || ||||| || || |||||
Sbjct 1214 GATAGTTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTACAGCGATCCTGTAGCGGCCGT 1273
Query 23823 GCCGACTTCAAGGTATCCATCCACGATCCGTGGGCAGCTCTTCAGAAGCCGCAGAAGGGA 23882
| |||||||| || || ||||||||||| |||||||| | || || || || || |||
Sbjct 1274 GAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAAAAAGGA 1333
Query 23883 GTGTCGGCGTGGAACGAGCCGTATCGTGGAAACTTTGGTCAGTTGATGGCAACGAAACTG 23942
|||| | ||||||||||| || || |||||||| || || ||| || ||||
Sbjct 1334 TTGTCTTCATGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTAATGTCACTAAAACAA 1393
Query 23943 GCGTATCCGCACTTGAAAGTGCTACCTTCGATCGGTGGCTGGACGCTGTCTGATCCGTT- 24001
|| || | ||||| | || || || || ||||| |||||||| | ||||| ||
Sbjct 1394 GCCCGCCCTGAATTGAAGATTCTTCCATCTATTGGTGGGTGGACGCTTGCCGATCCTTTC 1453
Query 24002 ---TTATCACATGCACGAGCCCAGCGTACGCCGTGTGTTTATCGACTCTGTCGAAGAGTT 24058
|| | | || | | || | || | ||| | | || || | |||||
Sbjct 1454 TTCTTTTTAGTTGACAAATCTAAGAGAACAC----GATTTGTGCAGTCAGTAAAGGAGTT 1509
Query 24059 TTTGTTAACGTGGAAATTCTTTGACGGCGTCGACATTGATTGGGAGTTCCCCGGCGGCAA 24118
| | |||| ||||||||||| || || || || || |||||||||||||| || |||||
Sbjct 1510 TCTTCTAACATGGAAATTCTTCGATGGTGTTGATATCGATTGGGAGTTCCCTGGTGGCAA 1569
Query 24119 AGGGGCAAATCC 24130
||| || || ||
Sbjct 1570 AGGTGCTAACCC 1581
>seq24004
Length=11461
Score = 158 bits (174), Expect = 1e-33
Identities = 447/685 (65%), Gaps = 10/685 (1%)
Strand=Plus/Minus
Query 145103 TTAGACGTGAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTG 145162
|| || || |||||||||||||| || | ||||| || ||||| || || | || ||
Sbjct 9612 TTTGATGTAAAGGGTTCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTC 9553
Query 145163 GGCATGTACGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGC 145222
||||| || | ||||| |||||||||| || || || || | ||| || ||
Sbjct 9552 GGCATAGGAGCTATCAATAGAGAATTGCGCAAACCATGTTTTGCTATCTTTTCTTTAAGG 9493
Query 145223 GTACCCCAATCCCATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCC 145282
| |||| ||||| || || || | ||||||||| || ||||| | || ||
Sbjct 9492 ACAGCCCAGTCCCAAAGGTCTGTAGGAGTTTTGTCCCACATATCATACTGGAGGATACCT 9433
Query 145283 TCGCTGGCGGGGCTGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTT--GGCGAGCTCGC 145340
| ||| || || || |||||| | | ||||| ||| || |||| || | || |
Sbjct 9432 TGGCTTGCTGGACTCCCTTGATATGTGCTGTA--TGCACCTTCTTTTTCAGCTAATTCAC 9375
Query 145341 AACTCGCCTCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCG 145400
|||| || || | || || |||||||||| || ||||| ||||| || || |
Sbjct 9374 AACTAGCTTCTAATGCACCATAATAAATTGTTTCAAATATTTGTTGATTGAGAAGTATTG 9315
Query 145401 CTTCATCGCTCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTC 145460
||| || || ||||| | || | || || ||||| ||||| || | ||||| | |
Sbjct 9314 CTTTCTCACTTTCGTAAGATATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACAC 9255
Query 145461 CCACGCCGATGGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGAT 145520
| | || || || | |||| |||| || | | || || |||||| ||
Sbjct 9254 CAATACCAATAGGTCTATGTCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAAT 9195
Query 145521 TACGGTCGATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTT 145580
|| || |||| ||| || || ||| | ||| | |||||| || | || ||||
Sbjct 9194 TAACATCAATAACTTTGTTTAAATTTTGAGTTACAATCTTTGTGATTTCTTTTAATTTTT 9135
Query 145581 CAAAGTCAAACCGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAAT 145640
||| | ||| | | ||||| | || | || | || || || || | |
Sbjct 9134 TAAAATTAAATCTGTTATTTTCAACAAACA------TGTTAAGTGCTATGGAAGCAAGGT 9081
Query 145641 TACAAACTGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTAC 145700
| || |||||| || || | ||||||| || | ||| | ||| | ||||||||
Sbjct 9080 TGCACACTGCCACTTCATCTTCTGAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTAC 9021
Query 145701 ATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCA 145760
|||| || || || ||||||| |||||||| || ||||| || || ||||| || | ||
Sbjct 9020 ATTTAATAGTGCCAAGATTTTTTTGATTACTCTTTCTGTTACAAGCATCCTTATACAACA 8961
Query 145761 TGTACGGTCCGCCAGTCTCCACCTG 145785
|||| ||| ||||||||||| ||
Sbjct 8960 TGTATGGTGTACCAGTCTCCACTTG 8936
Score = 86.0 bits (94), Expect = 6e-12
Identities = 146/209 (70%), Gaps = 2/209 (1%)
Strand=Plus/Minus
Query 146277 AGATGCCGTCAATGCTATCGCTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCA 146336
|||| || |||||||||||| | || | | || || || ||| | | ||| | |
Sbjct 8441 AGATACCTTCAATGCTATCGTCTTTCATAGCTATAAGGAAACAGGAGGAAAGCTGTGGCC 8382
Query 146337 TCGGCGTCCCCGCCGAGAACAACGTCGGGCTCGCGTGCGTAAAC-ATTTTTCGGCTCATC 146395
||| || | || ||||||| || ||||| || || ||||| |||| || | ||||
Sbjct 8381 GCGGTGTGGCTGCGGAGAACAGTGTAGGGCTTGCATGTGTAAAATATTTCTCTGA-CATC 8323
Query 146396 ATCCGATACGTTTCGATAGCGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGC 146455
|| ||| |||| ||| || | |||||| || ||||||||||| | | ||| | |
Sbjct 8322 ATATTATAAGTTTTGATTGCACTATCAATGTCTTCACCATGAATGCCTATGGAGACTCTC 8263
Query 146456 ATGAGCATGTGTTGGGGCCGCTCCGCCAC 146484
|| ||||||||||| |||| || |||||
Sbjct 8262 ATAAGCATGTGTTGAGGCCTTTCAGCCAC 8234
>seq88586
Length=4530
Score = 116 bits (128), Expect = 3e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| ||||| | || ||||| | ||| | || || ||||||||||||||||| || |
Sbjct 2179 CCTCCGCGAAGTCGAAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGAC 2238
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || || ||||| || || || || |||| ||||| |||||||| || ||
Sbjct 2239 AATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTGGA 2298
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGAT 131186
|| ||||| || || |||||| |||| | | | || | |||||| | || ||| |
Sbjct 2299 ATACCTTCCTTATCTTGGATTTT-AGCTTTAACATTTTCTATAGTATCAGAGGCCTCCAC 2357
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| ||||| ||||||||| || || || || |||||||| |||||
Sbjct 2358 CTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCAT 2405
>seq44559
Length=2984
Score = 105 bits (116), Expect = 6e-18
Identities = 147/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| |||||| |||| ||| | ||| ||||||||||| |||||||| || |
Sbjct 206 CCACCTCGCAGACGCAGTACTAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGAC 147
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| || || | ||||| || || |||| | ||||||||| || || |||
Sbjct 146 AGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGG 87
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || |||||||| |||||| || | | || | |||||| | || || |
Sbjct 86 ATGCCCTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACT 27
Query 131188 TCGACGGTAACGGTTTTACCGGTTAG 131213
|| | ||||| ||| || || |||||
Sbjct 26 TCCAGGGTAATGGTCTTTCCAGTTAG 1
Score = 98.7 bits (108), Expect = 9e-16
Identities = 102/134 (76%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| |||||| |||||||| | ||| ||||| ||||| |||||||| || |
Sbjct 434 CCACCTCGCAGACGCAGTACTAAATGAAGGGTAGACTCTTTTTGGATGTTGTAGTCAGAC 375
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| || |||||||||||||| || |||| | ||| || || || || ||
Sbjct 374 AGGGTGCGACCATCTTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGTTGATCTGGGGGA 315
Query 131128 ATTCCTTCTTTGTC 131141
|| || ||||| ||
Sbjct 314 ATACCCTCTTTATC 301
>seq1324
Length=7229
Score = 86.0 bits (94), Expect = 6e-12
Identities = 94/125 (75%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 131112 CTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGT 131171
||||||||| || || ||||| |||||||| ||| || ||| | | ||| | |||
Sbjct 1541 CTGCTGGTCTGGGGGAATTCCCTCTTTGTCTTGGATCTTGGCCTTTACATTCTCGATAGT 1600
Query 131172 ATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTG 131231
|| | || ||||| || | ||| | ||| ||||| ||||| ||||| |||||||||||
Sbjct 1601 GTCCGAGGGCTCGACCTCAAGGGTGATGGTCTTACCCGTTAGGGTTTTCACGAAAATCTG 1660
Query 131232 CATGA 131236
|||||
Sbjct 1661 CATGA 1665
>seq45806
Length=6479
Score = 84.2 bits (92), Expect = 2e-11
Identities = 93/123 (76%), Gaps = 6/123 (5%)
Strand=Plus/Plus
Query 113786 GGCTTTTACTATTTGAATCGTGGCGATGAAGTGCGCTGCGCTTTCTGCAAAGTCGAGATA 113845
||||| || ||| || || ||||||||||| |||||||| || || ||||| || ||
Sbjct 4835 GGCTTCTATTATCTGGGCCGCGGCGATGAAGTACGCTGCGCGTTTTGTAAAGTAGAAATT 4894
Query 113846 ATGAGATGGAGACCCGGCGACGATCCTCTCGCC---GACCACAAACGTTGGGCGCCTCAC 113902
|||| |||| | ||||||||||| |||| |||||| | || |||||||||||
Sbjct 4895 ATGAAATGGGTTGCGGGCGACGATCC---CGCCAAGGACCACCAGCGCTGGGCGCCTCAG 4951
Query 113903 TGC 113905
|||
Sbjct 4952 TGC 4954
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 470610839381760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |