Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq21383 183 3e-41 seq24004 158 1e-33 seq88586 116 3e-21 seq44559 105 6e-18 seq1324 86.0 6e-12 seq45806 84.2 2e-11 >seq21383 Length=8822 Score = 183 bits (202), Expect = 3e-41 Identities = 336/492 (68%), Gaps = 8/492 (2%) Strand=Plus/Plus Query 23643 GCCTACTTTGTCGAGTGGGGCGTATATCCCAGACAATTTCCCGTAGACAAAGTGCCCGTG 23702 |||||||| || || ||||| || ||||| || |||| ||||| || | || | Sbjct 1094 GCCTACTTCGTAGAATGGGGTGTCTATCCTAGGAAATTCCCCGTGGATCGTATACCTATA 1153 Query 23703 CCTAATTTGTCACATTTGCTCTACGGCTTCGTACCTATATGCGGCGGCGAGGGAATTAAC 23762 |||||| | | ||||||||||||||||| | || || |||||||| || || || || Sbjct 1154 CCTAATCTTACTCATTTGCTCTACGGCTTTATTCCAATTTGCGGCGGTGACGGCATCAAT 1213 Query 23763 GACGCTCTCAAAACCGTGCCGGGCAGTTTCGAGGCGCTGCAGCGTTCGTGCGCGGGCCGC 23822 || | | ||| | ||||||||| | || || ||||| || || ||||| Sbjct 1214 GATAGTTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTACAGCGATCCTGTAGCGGCCGT 1273 Query 23823 GCCGACTTCAAGGTATCCATCCACGATCCGTGGGCAGCTCTTCAGAAGCCGCAGAAGGGA 23882 | |||||||| || || ||||||||||| |||||||| | || || || || || ||| Sbjct 1274 GAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAAAAAGGA 1333 Query 23883 GTGTCGGCGTGGAACGAGCCGTATCGTGGAAACTTTGGTCAGTTGATGGCAACGAAACTG 23942 |||| | ||||||||||| || || |||||||| || || ||| || |||| Sbjct 1334 TTGTCTTCATGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTAATGTCACTAAAACAA 1393 Query 23943 GCGTATCCGCACTTGAAAGTGCTACCTTCGATCGGTGGCTGGACGCTGTCTGATCCGTT- 24001 || || | ||||| | || || || || ||||| |||||||| | ||||| || Sbjct 1394 GCCCGCCCTGAATTGAAGATTCTTCCATCTATTGGTGGGTGGACGCTTGCCGATCCTTTC 1453 Query 24002 ---TTATCACATGCACGAGCCCAGCGTACGCCGTGTGTTTATCGACTCTGTCGAAGAGTT 24058 || | | || | | || | || | ||| | | || || | ||||| Sbjct 1454 TTCTTTTTAGTTGACAAATCTAAGAGAACAC----GATTTGTGCAGTCAGTAAAGGAGTT 1509 Query 24059 TTTGTTAACGTGGAAATTCTTTGACGGCGTCGACATTGATTGGGAGTTCCCCGGCGGCAA 24118 | | |||| ||||||||||| || || || || || |||||||||||||| || ||||| Sbjct 1510 TCTTCTAACATGGAAATTCTTCGATGGTGTTGATATCGATTGGGAGTTCCCTGGTGGCAA 1569 Query 24119 AGGGGCAAATCC 24130 ||| || || || Sbjct 1570 AGGTGCTAACCC 1581 >seq24004 Length=11461 Score = 158 bits (174), Expect = 1e-33 Identities = 447/685 (65%), Gaps = 10/685 (1%) Strand=Plus/Minus Query 145103 TTAGACGTGAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTG 145162 || || || |||||||||||||| || | ||||| || ||||| || || | || || Sbjct 9612 TTTGATGTAAAGGGTTCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTC 9553 Query 145163 GGCATGTACGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGC 145222 ||||| || | ||||| |||||||||| || || || || | ||| || || Sbjct 9552 GGCATAGGAGCTATCAATAGAGAATTGCGCAAACCATGTTTTGCTATCTTTTCTTTAAGG 9493 Query 145223 GTACCCCAATCCCATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCC 145282 | |||| ||||| || || || | ||||||||| || ||||| | || || Sbjct 9492 ACAGCCCAGTCCCAAAGGTCTGTAGGAGTTTTGTCCCACATATCATACTGGAGGATACCT 9433 Query 145283 TCGCTGGCGGGGCTGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTT--GGCGAGCTCGC 145340 | ||| || || || |||||| | | ||||| ||| || |||| || | || | Sbjct 9432 TGGCTTGCTGGACTCCCTTGATATGTGCTGTA--TGCACCTTCTTTTTCAGCTAATTCAC 9375 Query 145341 AACTCGCCTCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCG 145400 |||| || || | || || |||||||||| || ||||| ||||| || || | Sbjct 9374 AACTAGCTTCTAATGCACCATAATAAATTGTTTCAAATATTTGTTGATTGAGAAGTATTG 9315 Query 145401 CTTCATCGCTCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTC 145460 ||| || || ||||| | || | || || ||||| ||||| || | ||||| | | Sbjct 9314 CTTTCTCACTTTCGTAAGATATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACAC 9255 Query 145461 CCACGCCGATGGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGAT 145520 | | || || || | |||| |||| || | | || || |||||| || Sbjct 9254 CAATACCAATAGGTCTATGTCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAAT 9195 Query 145521 TACGGTCGATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTT 145580 || || |||| ||| || || ||| | ||| | |||||| || | || |||| Sbjct 9194 TAACATCAATAACTTTGTTTAAATTTTGAGTTACAATCTTTGTGATTTCTTTTAATTTTT 9135 Query 145581 CAAAGTCAAACCGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAAT 145640 ||| | ||| | | ||||| | || | || | || || || || | | Sbjct 9134 TAAAATTAAATCTGTTATTTTCAACAAACA------TGTTAAGTGCTATGGAAGCAAGGT 9081 Query 145641 TACAAACTGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTAC 145700 | || |||||| || || | ||||||| || | ||| | ||| | |||||||| Sbjct 9080 TGCACACTGCCACTTCATCTTCTGAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTAC 9021 Query 145701 ATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCA 145760 |||| || || || ||||||| |||||||| || ||||| || || ||||| || | || Sbjct 9020 ATTTAATAGTGCCAAGATTTTTTTGATTACTCTTTCTGTTACAAGCATCCTTATACAACA 8961 Query 145761 TGTACGGTCCGCCAGTCTCCACCTG 145785 |||| ||| ||||||||||| || Sbjct 8960 TGTATGGTGTACCAGTCTCCACTTG 8936 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/209 (70%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 146277 AGATGCCGTCAATGCTATCGCTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCA 146336 |||| || |||||||||||| | || | | || || || ||| | | ||| | | Sbjct 8441 AGATACCTTCAATGCTATCGTCTTTCATAGCTATAAGGAAACAGGAGGAAAGCTGTGGCC 8382 Query 146337 TCGGCGTCCCCGCCGAGAACAACGTCGGGCTCGCGTGCGTAAAC-ATTTTTCGGCTCATC 146395 ||| || | || ||||||| || ||||| || || ||||| |||| || | |||| Sbjct 8381 GCGGTGTGGCTGCGGAGAACAGTGTAGGGCTTGCATGTGTAAAATATTTCTCTGA-CATC 8323 Query 146396 ATCCGATACGTTTCGATAGCGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGC 146455 || ||| |||| ||| || | |||||| || ||||||||||| | | ||| | | Sbjct 8322 ATATTATAAGTTTTGATTGCACTATCAATGTCTTCACCATGAATGCCTATGGAGACTCTC 8263 Query 146456 ATGAGCATGTGTTGGGGCCGCTCCGCCAC 146484 || ||||||||||| |||| || ||||| Sbjct 8262 ATAAGCATGTGTTGAGGCCTTTCAGCCAC 8234 >seq88586 Length=4530 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || ||||| | || ||||| | ||| | || || ||||||||||||||||| || | Sbjct 2179 CCTCCGCGAAGTCGAAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGAC 2238 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || || ||||| || || || || |||| ||||| |||||||| || || Sbjct 2239 AATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTGGA 2298 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||| || || |||||| |||| | | | || | |||||| | || ||| | Sbjct 2299 ATACCTTCCTTATCTTGGATTTT-AGCTTTAACATTTTCTATAGTATCAGAGGCCTCCAC 2357 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||||| ||||||||| || || || || |||||||| ||||| Sbjct 2358 CTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCAT 2405 >seq44559 Length=2984 Score = 105 bits (116), Expect = 6e-18 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| |||||| |||| ||| | ||| ||||||||||| |||||||| || | Sbjct 206 CCACCTCGCAGACGCAGTACTAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGAC 147 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| || || | ||||| || || |||| | ||||||||| || || ||| Sbjct 146 AGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGG 87 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || |||||||| |||||| || | | || | |||||| | || || | Sbjct 86 ATGCCCTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACT 27 Query 131188 TCGACGGTAACGGTTTTACCGGTTAG 131213 || | ||||| ||| || || ||||| Sbjct 26 TCCAGGGTAATGGTCTTTCCAGTTAG 1 Score = 98.7 bits (108), Expect = 9e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| |||||| |||||||| | ||| ||||| ||||| |||||||| || | Sbjct 434 CCACCTCGCAGACGCAGTACTAAATGAAGGGTAGACTCTTTTTGGATGTTGTAGTCAGAC 375 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| || |||||||||||||| || |||| | ||| || || || || || Sbjct 374 AGGGTGCGACCATCTTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGTTGATCTGGGGGA 315 Query 131128 ATTCCTTCTTTGTC 131141 || || ||||| || Sbjct 314 ATACCCTCTTTATC 301 >seq1324 Length=7229 Score = 86.0 bits (94), Expect = 6e-12 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 131112 CTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGT 131171 ||||||||| || || ||||| |||||||| ||| || ||| | | ||| | ||| Sbjct 1541 CTGCTGGTCTGGGGGAATTCCCTCTTTGTCTTGGATCTTGGCCTTTACATTCTCGATAGT 1600 Query 131172 ATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTG 131231 || | || ||||| || | ||| | ||| ||||| ||||| ||||| ||||||||||| Sbjct 1601 GTCCGAGGGCTCGACCTCAAGGGTGATGGTCTTACCCGTTAGGGTTTTCACGAAAATCTG 1660 Query 131232 CATGA 131236 ||||| Sbjct 1661 CATGA 1665 >seq45806 Length=6479 Score = 84.2 bits (92), Expect = 2e-11 Identities = 93/123 (76%), Gaps = 6/123 (5%) Strand=Plus/Plus Query 113786 GGCTTTTACTATTTGAATCGTGGCGATGAAGTGCGCTGCGCTTTCTGCAAAGTCGAGATA 113845 ||||| || ||| || || ||||||||||| |||||||| || || ||||| || || Sbjct 4835 GGCTTCTATTATCTGGGCCGCGGCGATGAAGTACGCTGCGCGTTTTGTAAAGTAGAAATT 4894 Query 113846 ATGAGATGGAGACCCGGCGACGATCCTCTCGCC---GACCACAAACGTTGGGCGCCTCAC 113902 |||| |||| | ||||||||||| |||| |||||| | || ||||||||||| Sbjct 4895 ATGAAATGGGTTGCGGGCGACGATCC---CGCCAAGGACCACCAGCGCTGGGCGCCTCAG 4951 Query 113903 TGC 113905 ||| Sbjct 4952 TGC 4954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 470610839381760