Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq21383 192 5e-44 seq31223 104 2e-17 seq44559 95.1 1e-14 seq207359 84.2 2e-11 seq147593 84.2 2e-11 >seq21383 Length=8822 Score = 192 bits (212), Expect = 5e-44 Identities = 768/1193 (64%), Gaps = 31/1193 (3%) Strand=Plus/Minus Query 95829 ATATTCATGGCATTAAGCAGATCGCCATTGTCAGCGTCTATTTCCCAGGCAAACAAACCT 95888 || ||||||||||| || || || || || |||||||| | |||||| ||||| | ||| Sbjct 2271 ATGTTCATGGCATTCAGTAGGTCACCGTTATCAGCGTCCACTTCCCAAGCAAAGAGACCA 2212 Query 95889 CCTAACTTGTTTTGTTCCACATATCGACCTTTAGCTATAACAGAATCAACACTATCATAT 95948 |||| |||||| | | |||||| ||| || | ||||| || | || ||||||| Sbjct 2211 CCTAGCTTGTTATTTCTTACATATTTACCCTTTTCAATAACCGATCTAGCATTATCATAG 2152 Query 95949 GAAATTAAATCGCCT-TTGGTTTTATCAAAAACGTAGGCGGCTTTTGCTACGTTGTCA-A 96006 | | | ||| || ||| | | | || | |||| | ||||| || || ||||| | Sbjct 2151 GTTACAAGATCTCCAGTTGATGGTCTGAAGA-CGTAAGGGGCTTGGGCGACATTGTCGTA 2093 Query 96007 ATTTAACAATATATTTGTTT-----ATTTCGTTTTTGATTTGGCGATAATCAACAACGCC 96061 || ||| || || ||||| || || | | ||| ||||| || || Sbjct 2092 ATGGAACTCCCACTTGCCTTGAGCGATTTCATTCGCAATCTCCCTATAGTCAACCACTCC 2033 Query 96062 ATCTTCCCAAGTGCCCGAAACGGGCCCGTTACTACTTCCCAAAAAATAGTTATCGTTTTC 96121 |||| |||||| || || || || || | || || | | || || Sbjct 2032 GTCTTGCCAAGTTCCTTTGACAGGTCCAGTAGCGTTGCCTGTGAAGGGAATGTTGTCTTT 1973 Query 96122 GTAATT-TGACACTCCAGTCCAGCCGCGACCGTACATGGCCACGCCCACAATAATTTTGC 96180 ||||| ||| || |||||||| || ||||| ||||| || || || || | ||| || Sbjct 1972 GTAATCATGA-ACGCCAGTCCAACCACGACCATACATAGCAACACCTACTACAATCTTCT 1914 Query 96181 GCGGGTCCACGCCTTGATTTGTGAGCAA---TTTAACGGCATGGTCCGTGTTGTACAGCT 96237 || | ||| || || | ||||| ||| || || ||| | |||| | Sbjct 1913 TAGGATTCACTCCCTGC---GCCAGCAAGTATTTTACTCCAAAGTCAGATGTGTAAGTTT 1857 Query 96238 CGTTTGGGTTCCAACTCGGCGCGTACAGTGTAGTTTGGTATCCCAAATCAATGTTTGACC 96297 | || || ||||| |||||||||| || ||||| | ||| | | | ||||||| Sbjct 1856 CCTTGGGATTCCACGCAGGCGCGTACAATGGCGTTTGATGTCCAAGAGTATCATTTGACC 1797 Query 96298 ACGCGCCTTTAAAATCGTAGCTCATGAGAAATATTTTGTCGAGGAACTTTTGCGCAACGT 96357 | || || || || ||||| ||||| | || || | || | | ||||| || | Sbjct 1796 AGGCTCCCTTGAAGTCGTAACTCATCAAGAAAATATGATCCATATAATTTTGAGCTTTGC 1737 Query 96358 CGTATTTTACTACAGCAATTTTGTCGTGGCCGGCACTGATTGCACTTGTCAACTCGTACG 96417 |||| | || || ||||| || || ||||| || ||| || || ||||| Sbjct 1736 CGTAGTCAACAACTTGGATTTTATCCCATCCAGCACTAATAGCAGAAGTTAATTCGTATT 1677 Query 96418 TTTTGCCCGTTTGCAGTTGCAA-CTCGTCTAACATCACGCGCAATTCCTTTAATAGAATG 96476 | || || | | || || | ||| || | |||| | || ||||| || | | | | Sbjct 1676 TCTTACCATTCTT-AGCTGAGAGCTCATCCAGCATCTCACGTAATTCTTTCATCAAACTT 1618 Query 96477 TTGTACGTGTCAGCGTCGCGCTCTTTGTTGCCGAGCGTC-GGGTTGGCGCCTTTACCGCC 96535 || ||| | || ||| | | ||||| ||| ||||| || ||||| || || Sbjct 1617 ACATAACAATCACCATCT---TCTGGGCTACCGAG-GTCAGGGTTAGCACCTTTGCCACC 1562 Query 96536 CGGAAATTCCCAGTCGATGTCCACTCCGTCGAAAAATTTCCAAACCTGCAAAAATTCTCT 96595 || || ||||| ||||| || || || ||||| |||||||| | | ||| || | Sbjct 1561 AGGGAACTCCCAATCGATATCAACACCATCGAAGAATTTCCATGTTAGAAGAAACTCCTT 1502 Query 96596 GACGGAGTCTACAAACACGCGCCGTTTTTCCGCGTCGTGCATGTAATA----GAACGGGT 96651 || || | ||||| || | | | | | || || ||| | ||| || | Sbjct 1501 TACTGACTGCACAAAT---CGTGTTCTCTTAGATTTGT-CAACTAAAAAGAAGAAAGGAT 1446 Query 96652 CGGACAGTGTCCAGCCGCCGATAGACGGCAGAATTTTAAGGTGTGGATTAGCCAGTTTGG 96711 ||| || ||||| || || ||||| || ||||| || | | || || |||| Sbjct 1445 CGGCAAGCGTCCACCCACCAATAGATGGAAGAATCTTCAATTCAGGGCGGGCTTGTTTTA 1386 Query 96712 CCGCCATCAACTGACCAAAGTTGCCTTTGTAGGGCTCGTTCCAAGCAGACACGCCCTTTT 96771 | ||| || || ||||||||||||||||||||||||||||| | ||||| || |||| Sbjct 1385 GTGACATTAATTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCATGAAGACAATCCTTTTT 1326 Query 96772 GCGGTTTTTGTACTGCGGCCCAAGGGTCGTGAATAGCAACTTTAAAATCTGAACGGCCCT 96831 | |||||||||| ||| ||||| || ||||| || | ||||| || || |||||| Sbjct 1325 GTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTGAAGTCCTCACGGCCGC 1266 Query 96832 GGCAAGAGCGTTGCAGCGCTTCAAAACTACCGGGTATGGTTTTAAGGGCATCGTTAAGGC 96891 || || || || || |||| ||||| || || ||| | ||| || | || Sbjct 1265 TACAGGATCGCTGTAGTGCTTGGAAACTGCCTTCGATCTCTTTTAAACTATCATTGATGC 1206 Query 96892 CGTCGCCGCCACAAATGGGTATAAACCCGTACAACAAATGTGACAAGTTGGGCAGCGGCA 96951 |||| ||||| ||||| || ||||| ||||| | |||||| | | || || | || | Sbjct 1205 CGTCACCGCCGCAAATTGGAATAAAGCCGTAGAGCAAATGAGTAAGATTAGGTATAGGTA 1146 Query 96952 CTTTGTCCACCGGAAAGTTACGACCATACACGCCCCATTCCACAAAATACGCA 97004 ||||| || || || | | ||| || |||||||| || || || ||| Sbjct 1145 TACGATCCACGGGGAATTTCCTAGGATAGACACCCCATTCTACGAAGTAGGCA 1093 >seq31223 Length=3647 Score = 104 bits (114), Expect = 2e-17 Identities = 162/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || |||| || ||| | ||| || || || |||||||| || || || || | Sbjct 275 CCGCCACGAAGCCGCAATACTAAATGTAGGGTCGATTCCTTTTGAATATTATAATCAGAT 334 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | | || |||| |||||| || ||| ||||||||| |||||| || || Sbjct 335 AATGTACGGCCATCTTCCAGTTGTTTTCCAGCAAAAATAAGCCTCTGTTGATCTGGGGGA 394 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||||||||| || ||||| |||||| | | | ||||||| ||||| Sbjct 395 ATACCCTCTTTGTCTTGGATCTTTGC--CTTCACATTTTCGATAGTGTCGGACGGCTCTA 452 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 || | |||||||||||||| || || || || ||||| ||||||||| Sbjct 453 CCTCTAAAGTGATGGTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCATT 502 >seq44559 Length=2984 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/208 (71%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || ||||| || | |||||| | ||| || || ||||||||||| ||||||||||| | | Sbjct 206 CCACCTCGCAGACGCAGTACTAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGAC 147 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | || |||||||| || || ||| | ||||| ||||| || || || Sbjct 146 AGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGG 87 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | |||||||||||| || || ||| || || | | | ||| || ||| ||| Sbjct 86 ATGCCCTCTTTGTCTTGGATTTTAGCT--TTTACATTTTCAATAGTATCAGAGGGTTCCA 29 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAG 16914 ||||| ||| ||||| ||||| || || Sbjct 28 CTTCCAGGGTAATGGTCTTTCCAGTTAG 1 Score = 89.7 bits (98), Expect = 4e-13 Identities = 159/230 (69%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 ||| || || || | ||||| | ||||| || || || ||||| ||||| ||||| | Sbjct 1347 CCCACCACGAAGACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTATAGTCCGA 1288 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 | || | | ||||| || ||||| || ||| | || || ||||||||||| || Sbjct 1287 TAGAGTGCGGCCATCCTCTAACTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGG 1228 Query 16828 CACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCC 16885 | |||||| ||||| || || || ||| || | | | ||||||| |||||| Sbjct 1227 AATGCCCTCCTTGTCTTGGATCTTAGC--CTTAACATTTTCGATAGTGTCGGATGGCTCC 1170 Query 16886 GTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| |||||||| || || || || || || ||||| |||||||| Sbjct 1169 ACCTCCAAAGTGATGGTCTTCCCAGTAAGAGTCTTAACAAAGATCTGCAT 1120 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/230 (69%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 |||||||| || | ||||||| || || |||||||| || || || |||||||| | | Sbjct 890 CCTCCTCGGAGACGGAGTACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCAGAC 831 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | | || |||| ||| || || || | ||||| || ||||| || ||| Sbjct 830 AGGGTGCGGCCATCTTCCAGTTGCTTACCAGCGAAGATAAGACGTTGTTGATCTGGAGGA 771 Query 16829 ACGCCCTCTTTGTCGGCAATTT--GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | || || || || ||| | ||| || || | | | ||||| ||||| Sbjct 770 ATTCCTTCCTTATCTTGAATCTTAGCT--TTAACATTTTCAATGGTGTCTGAAGGCTCAA 713 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 ||||| || || |||||||| || || ||||||||||| || |||||| Sbjct 712 CTTCCAAAGTTATTGTTTTTCCAGTAAGTGTTTTGACAAATATTTGCATT 663 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 |||||||||| | | ||||| |||| |||||||| || || || |||||||| | Sbjct 1118 CCTCCTCGTAAACGTAATACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAG 1059 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | | ||||||| || ||||| || |||| || || ||||| || || Sbjct 1058 AGAGTACGGCCATCCTCCAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGA 999 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||||||||| || || ||| || || | | | |||||| ||| || Sbjct 998 ATACCCTCTTTGTCTTGGATCTTGGCT--TTAACATTTTCAATAGTGTCTGAGGGTTCAA 941 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||| | ||||| ||||| || ||||| || || ||||| |||||||| Sbjct 940 CTTCTAATGTGATAGTTTTCCCTGTCAGTGTCTTTACAAAGATCTGCAT 892 >seq207359 Length=487 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/214 (69%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 ||||| | |||| || || || ||||| ||||||||||| | || || | || Sbjct 426 AGTACTAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGACAGTGTACGACCATCT 367 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 || ||||| ||||||||| ||||||| || ||||| ||| ||| | ||| |||||||| Sbjct 366 TCTAATTGCTTGCCCGCAAAAATAAGACGTTGTTGATCCGGAGGAATGCCTTCTTTGTCT 307 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || ||| ||||| | | | ||||| | || ||| | || || | Sbjct 306 TGGATTTTAGCT--TTCACATTTTCAATTGTGTCAGAAGCTTCAACTTCTAAAGTAATTG 249 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||||| || || ||||| ||||| || ||||| Sbjct 248 TTTTTCCAGTGAGTGTTTTAACAAAGATTTGCAT 215 >seq147593 Length=1093 Score = 84.2 bits (92), Expect = 2e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 29344 GGCGGCGTGGGGCTGAATCTAACGGGCGGCAACCACCTCGTTTTGTTGGAGCCGCACTGG 29403 |||||||| ||||||||||| |||| | |||||| | || |||| ||||||||| Sbjct 285 GGCGGCGTAGGGCTGAATCTGTGCGGCGCTAGCCACCTGCTGCTGCTGGACCCGCACTGG 344 Query 29404 AACCCGCAGGTGGAGTTGCAGGCGCAGGGCCGCATCCACCGTTTGGGCCAG 29454 ||||||||| ||||| |||||| |||| ||| | |||| |||| ||| Sbjct 345 AACCCGCAGCTGGAGGAGCAGGCACAGGATCGCGTGTACCGCGTGGGGCAG 395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 403914897305860