Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25]
237,614 sequences; 309,419,125 total letters
Query= NC_008348.1
Length=168041
Score E
Sequences producing significant alignments: (Bits) Value
seq21383 251 8e-62
seq45806 113 5e-20
>seq21383
Length=8822
Score = 251 bits (278), Expect = 8e-62
Identities = 782/1200 (65%), Gaps = 23/1200 (2%)
Strand=Plus/Minus
Query 51249 CCCAGGCCCTCGTGCATGGCGTTCAGTAGGTCGCCGTTGTCAGCGTCGATTTCCCACGCA 51308
|| || ||| || |||||| ||||||||||| ||||| |||||||| | |||||| |||
Sbjct 2280 CCGAGACCCATGTTCATGGCATTCAGTAGGTCACCGTTATCAGCGTCCACTTCCCAAGCA 2221
Query 51309 AACAATCCCGCCAACCCGTTCGCAAGCACGTACTGGCCCTTGGCGCGAACGGATCGAGCG 51368
|| | || | | | ||| || || | ||||| | ||| |||| |||
Sbjct 2220 AAGAGACCACCTAGCTTGTTATTTCTTACATATTTACCCTTTTCAATAACCGATCTAGCA 2161
Query 51369 TTGTCGAACGTGATCAGGTTGCCCGC-GATCGGTTCGAAGCCGTACGCAGCCTCGGCGAT 51427
|| || | || | || | || | ||| ||| |||| |||| | || | |||||
Sbjct 2160 TTATCATAGGTTACAAGATCTCCAGTTGAT-GGTCTGAAGACGTAAGGGGCTTGGGCGAC 2102
Query 51428 CAGATCGTAGTAGAACTCGTAGT--CTTTGA-CGAACTCGTTCGCGATCTGCCGATAGTC 51484
||||| | |||||| | | | |||| ||| || ||||| |||| || ||||||
Sbjct 2101 ATTGTCGTAATGGAACTCCCACTTGCCTTGAGCGATTTCATTCGCAATCTCCCTATAGTC 2042
Query 51485 GACCACCCCATTTTCCCAGGTGCCTTCGATGGGTCCGCCGGCGACGCCGCTGAACCAGTT 51544
||||| || | || ||| || |||| || ||||| ||| ||| |||| |
Sbjct 2041 AACCACTCCGTCTTGCCAAGTTCCTTTGACAGGTCCAGTAGCGTTGCCTGTGAAGGGAAT 1982
Query 51545 CGGTTCGTAGTCGTAGCCGGTCACGTTCGACCAGCCGCGAGCGTACATCGCCACGCCGAC 51604
||| || | ||| | ||| | ||| || ||| | ||||| || || || ||
Sbjct 1981 --GTT-GTCTTTGTAATCATGAACGCCAGTCCAACCACGACCATACATAGCAACACCTAC 1925
Query 51605 GACGATCTTCT---GATTGCGCACGCCCTGTTCGAGAAGCGACGACACGGCATAGTCGGT 51661
|| ||||||| |||| ||| ||||| | || | | || || |||| |
Sbjct 1924 TACAATCTTCTTAGGATT---CACTCCCTGCGCCAGCAAGTATTTTACTCCAAAGTCAGA 1868
Query 51662 GGTGTACTTTTCGTCGGGGTTCCATTGGGGCGCGAACAGTGTGGTCTGGTAGCCCAGATC 51721
||||| |||| | ||| ||||| |||||| ||| || || || | || |||
Sbjct 1867 TGTGTAAGTTTCCTTGGGATTCCACGCAGGCGCGTACAATGGCGTTTGATGTCCAAGAGT 1808
Query 51722 GGTGTTGGACCACGCACCCTTGAAATCGTAGTTCATGAGGAAAATGTAATCCAACTGCGT 51781
|| ||||| || |||||||| ||||| |||| | |||||| | ||||| | |
Sbjct 1807 ATCATTTGACCAGGCTCCCTTGAAGTCGTAACTCATCAAGAAAATATGATCCATATAATT 1748
Query 51782 CTGCGCCCGAGCGTAGTCGACGACTTGAATTTTATCGTAGCCCGCGCTGATGGCGCTGGT 51841
|| || ||||||| || ||||| |||||||| | || || || || || ||
Sbjct 1747 TTGAGCTTTGCCGTAGTCAACAACTTGGATTTTATCCCATCCAGCACTAATAGCAGAAGT 1688
Query 51842 CAACAGGTA---CGAACGGTTCGTGGCGGCGCTCAACTCGTCGAGCATGTCGCGCAGCTC 51898
|| ||| | || ||| | || | | | ||| || ||||| || || | ||
Sbjct 1687 TAATTCGTATTTCTTACCATTCTTAGCTGAG---AGCTCATCCAGCATCTCACGTAATTC 1631
Query 51899 GGTCAAAAGCGTCACGTACGTCGCACCATCGCGATCGGGATCGCCCAGGTCGGGATTGGC 51958
||| | | || || ||||||| || || || ||||| || || ||
Sbjct 1630 TTTCATCAAACTTACATAACAATCACCATCT---TCTGGGCTACCGAGGTCAGGGTTAGC 1574
Query 51959 GCCTTTGCCGCCCGGAAACTCCCAGTCGACGTCGACTCCGTCGAAGAACTTCCAAGTCAG 52018
|||||||| || || |||||||| |||| || || || |||||||| ||||| || ||
Sbjct 1573 ACCTTTGCCACCAGGGAACTCCCAATCGATATCAACACCATCGAAGAATTTCCATGTTAG 1514
Query 52019 CAGAAACTCGCGAACCGATTCGACGAAGGTTGCGCGTTTGCTCGCGTCGTGCAGGAAGAA 52078
|||||||| || || | || || || | || ||| | |||||
Sbjct 1513 AAGAAACTCCTTTACTGACTGCACAAATCGTGTTCTCTTAGATTTGTCAACTAAAAAGAA 1454
Query 52079 GAACGGATCGGACAGCGTCCAACCGCCGATCGAGGGCAGAATCTTGAGCGAAGGATTGGC 52138
||| ||||||| |||||||| || || || || || |||||||| | ||| |||
Sbjct 1453 GAAAGGATCGGCAAGCGTCCACCCACCAATAGATGGAAGAATCTTCAATTCAGGGCGGGC 1394
Query 52139 CCGTTTGGCCGCCATCAGCTGTCCAAAGTTTCCCTTGTACGGATCGTTCCAGGCCGAGAC 52198
|||| | ||| | || |||||||| || ||||| || |||||||| | || |
Sbjct 1393 TTGTTTTAGTGACATTAATTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCATGAAGACAA 1334
Query 52199 GCCTTTCTGCGGTTTCTGCAGCGCCGCCCAGGGATCGTGAATCGTCACCTTAAAGTCCGA 52258
||||| || ||||| || | || ||||| |||||||| || | || || ||||||
Sbjct 1333 TCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTGAAGTCCTC 1274
Query 52259 CCTGCCCACGCACGACCGTTGCAACGCTTCGAAACTGTTGTCGATCGGTTTCAGGCTGTC 52318
| ||| || || || || | |||| ||||||| |||||| ||| | || ||
Sbjct 1273 ACGGCCGCTACAGGATCGCTGTAGTGCTTGGAAACTGCCTTCGATCTCTTTTAAACTATC 1214
Query 52319 GTTGATGCCGTCGCCTCCGCACATGGGAATGAAGCCGTACAGCAGATGCGACAGGTTCGG 52378
||||||||||| || ||||| || ||||| |||||||| |||| ||| | || || ||
Sbjct 1213 ATTGATGCCGTCACCGCCGCAAATTGGAATAAAGCCGTAGAGCAAATGAGTAAGATTAGG 1154
Query 52379 CAACGGCACCAGATCTACGGGAAAGTTGCGCAAGTAAACGCCCCATTCGACAAAGTAGGC 52438
| || | |||| ||||| || || | || || |||||||| || ||||||||
Sbjct 1153 TATAGGTATACGATCCACGGGGAATTTCCTAGGATAGACACCCCATTCTACGAAGTAGGC 1094
>seq45806
Length=6479
Score = 113 bits (124), Expect = 5e-20
Identities = 148/205 (72%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 38443 ACTGGCCCAAGAGCATGAAGCAGACGCCGCAACAGTTGGCCGAGGCCGGCTTCTACTATT 38502
||||||| || |||||||||| ||| | | | ||||| || || |||| |||
Sbjct 5136 ACTGGCCTCGCAGTATGAAGCAGAAGCCTGAGGAACTCGCCGAAGCGGGATTCTTCTACA 5195
Query 38503 CGGGCACCGGAGACCAGGTCAAATGTTTCTTTTGCGGCGGCGGCCTTAAGGACTGGGAGC 38562
| ||| || ||| | || || |||| || | |||||| || ||||||||||||
Sbjct 5196 CCGGCCAGGGTGACAAAACTAAGTGCTTCTACTGTGACGGCGGACTCAAGGACTGGGAGA 5255
Query 38563 CTGCGGACGATCCGTGGGCGCAGCACGCGCGCTGGTTCGACAGGTGCGCTTACGTGCTCA 38622
| |||| ||||||| |||||||||||||||||||||| ||||||| |||||||
Sbjct 5256 ACGACGACGTGCCGTGGGAGCAGCACGCGCGCTGGTTCGACCGGTGCGCCTACGTGCAGC 5315
Query 38623 CCGTCAAAGGCGCCGACTACGTTCA 38647
||||||||| || ||||| ||
Sbjct 5316 TGGTCAAAGGCCGAGAGTACGTCCA 5340
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 536006424415440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |