Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq32346 159 4e-34 seq54636 136 4e-27 seq106232 132 5e-26 seq106231 132 5e-26 seq15483 132 5e-26 seq53754 131 2e-25 seq38900 129 7e-25 >seq32346 Length=5591 Score = 159 bits (176), Expect = 4e-34 Identities = 165/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 93355 ATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGC 93414 ||| | ||| ||||| || ||||| | ||| ||||| || ||||| ||||| ||||| || Sbjct 3805 ATCCCTTATATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATAGC 3864 Query 93415 AATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTC 93474 |||||| || || ||||| || || ||||| || | || || ||||| ||||| | ||| Sbjct 3865 AATTTGAAAACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGTGAAAAACGCTC 3924 Query 93475 TACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTAT 93534 || | || ||||| || |||||||| || || ||||| || || || | |||||| || Sbjct 3925 CACCAAGTTCTCATTAACAATACCATCAGAAGCCGCAAAGAATGCTAAGACATGCTTGAT 3984 Query 93535 AAAATGTTTCTCATCATCTTTAAGCTTATCCCAATC 93570 ||||||||||||| |||||| | | |||||||| Sbjct 3985 AAAATGTTTCTCACAATCTTTTAATGTCTCCCAATC 4020 Score = 156 bits (172), Expect = 5e-33 Identities = 160/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 93134 TCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCA 93193 ||||| ||||| || || || || | ||| |||||||| || | |||||||||||||||| Sbjct 2999 TCATTACTGAAAGTCAATCCGGGCATCAGACCTCGTTTTTTCAACCAAAATATTGAAGCA 3058 Query 93194 AAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAA 93253 || || || || |||||||| || || || |||||||| || | |||||||| |||| Sbjct 3059 AAGCTGCCTGAGAAAAATATTCCCTCAACTGCTGCAAAAGCAATTATACGTTCTCCAAAT 3118 Query 93254 TTTGCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGT 93313 | || | || |||| |||||| | ||| ||||| || || || ||||||| ||| ||| Sbjct 3119 GTAGCTGTCTTGCTGCCGATCCACTGTAACGCCCAGTCTGCCTTCTTCTTAACACATGGT 3178 Query 93314 AGTGTTTCGATAGCGTTAAATAGGTAATC 93342 || ||||| || || || |||| | |||| Sbjct 3179 AGAGTTTCAATTGCATTGAATAAGAAATC 3207 Score = 125 bits (138), Expect = 8e-24 Identities = 107/132 (81%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 93590 TCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCT 93649 || |||||||| ||||||||||||||||||| |||||||| ||||| | |||||| ||| Sbjct 4167 TCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGCCATATATCT 4226 Query 93650 TGATATTGAATTGGAAATATGACAAAACGATTAGGGTTATCTTTTAGTAACGGCTCTAGT 93709 ||||||| ||||| ||||| |||||||| |||| || || | | | || || ||| Sbjct 4227 GGATATTGGATTGGGAATATAACAAAACGTCTAGGATTTTCCCTCAACAGGGGTTCAAGT 4286 Query 93710 TGTGGGTCAAAC 93721 |||||||||||| Sbjct 4287 TGTGGGTCAAAC 4298 >seq54636 Length=10150 Score = 136 bits (150), Expect = 4e-27 Identities = 86/92 (93%), Gaps = 2/92 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct 10143 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGGGGGAGC 10084 Query 126323 GTGGGTTCGAACCCCACACCTGACAAATTATT 126354 ||||||||||||||||||||||||||||| || Sbjct 10083 GTGGGTTCGAACCCCACACCTGACAAATTTTT 10052 >seq106232 Length=1298 Score = 132 bits (146), Expect = 5e-26 Identities = 82/87 (94%), Gaps = 2/87 (2%) Strand=Plus/Minus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct 973 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGCG 914 Query 126324 TGGGTTCGAACCCCACACCTGACAAAT 126350 ||||||||||||||||||||||||||| Sbjct 913 TGGGTTCGAACCCCACACCTGACAAAT 887 >seq106231 Length=1271 Score = 132 bits (146), Expect = 5e-26 Identities = 82/87 (94%), Gaps = 2/87 (2%) Strand=Plus/Minus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct 966 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGCG 907 Query 126324 TGGGTTCGAACCCCACACCTGACAAAT 126350 ||||||||||||||||||||||||||| Sbjct 906 TGGGTTCGAACCCCACACCTGACAAAT 880 >seq15483 Length=15763 Score = 132 bits (146), Expect = 5e-26 Identities = 95/107 (89%), Gaps = 3/107 (3%) Strand=Plus/Plus Query 126247 TTTTGCGCTTCTATTTACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATC 126306 |||||| ||| ||| | |||||||||||||||||||||||||||||||||||||| || Sbjct 2462 TTTTGC-CTTATATAAAACGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTC 2520 Query 126307 TGGTTCCC--TCGGGAGCGTGGGTTCGAACCCCACACCTGACAAATT 126351 |||||||| ||||||||||||||||||||||||||||||| ||| Sbjct 2521 TGGTTCCCGAGAGGGAGCGTGGGTTCGAACCCCACACCTGACATATT 2567 >seq53754 Length=5221 Score = 131 bits (144), Expect = 2e-25 Identities = 80/84 (95%), Gaps = 2/84 (2%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323 |||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||| Sbjct 3223 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGATTGGGAGCG 3282 Query 126324 TGGGTTCGAACCCCACACCTGACA 126347 |||||||||||||||||||||||| Sbjct 3283 TGGGTTCGAACCCCACACCTGACA 3306 >seq38900 Length=28073 Score = 129 bits (142), Expect = 7e-25 Identities = 80/85 (94%), Gaps = 2/85 (2%) Strand=Plus/Minus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct 2900 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGGGAGGGAGCG 2841 Query 126324 TGGGTTCGAACCCCACACCTGACAA 126348 ||||||||||||||||||||||||| Sbjct 2840 TGGGTTCGAACCCCACACCTGACAA 2816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 555206825973360