Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25]
237,614 sequences; 309,419,125 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq32346 159 4e-34
seq54636 136 4e-27
seq106232 132 5e-26
seq106231 132 5e-26
seq15483 132 5e-26
seq53754 131 2e-25
seq38900 129 7e-25
>seq32346
Length=5591
Score = 159 bits (176), Expect = 4e-34
Identities = 165/216 (76%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 93355 ATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGC 93414
||| | ||| ||||| || ||||| | ||| ||||| || ||||| ||||| ||||| ||
Sbjct 3805 ATCCCTTATATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATAGC 3864
Query 93415 AATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTC 93474
|||||| || || ||||| || || ||||| || | || || ||||| ||||| | |||
Sbjct 3865 AATTTGAAAACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGTGAAAAACGCTC 3924
Query 93475 TACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTAT 93534
|| | || ||||| || |||||||| || || ||||| || || || | |||||| ||
Sbjct 3925 CACCAAGTTCTCATTAACAATACCATCAGAAGCCGCAAAGAATGCTAAGACATGCTTGAT 3984
Query 93535 AAAATGTTTCTCATCATCTTTAAGCTTATCCCAATC 93570
||||||||||||| |||||| | | ||||||||
Sbjct 3985 AAAATGTTTCTCACAATCTTTTAATGTCTCCCAATC 4020
Score = 156 bits (172), Expect = 5e-33
Identities = 160/209 (77%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 93134 TCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCA 93193
||||| ||||| || || || || | ||| |||||||| || | ||||||||||||||||
Sbjct 2999 TCATTACTGAAAGTCAATCCGGGCATCAGACCTCGTTTTTTCAACCAAAATATTGAAGCA 3058
Query 93194 AAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAA 93253
|| || || || |||||||| || || || |||||||| || | |||||||| ||||
Sbjct 3059 AAGCTGCCTGAGAAAAATATTCCCTCAACTGCTGCAAAAGCAATTATACGTTCTCCAAAT 3118
Query 93254 TTTGCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGT 93313
| || | || |||| |||||| | ||| ||||| || || || ||||||| ||| |||
Sbjct 3119 GTAGCTGTCTTGCTGCCGATCCACTGTAACGCCCAGTCTGCCTTCTTCTTAACACATGGT 3178
Query 93314 AGTGTTTCGATAGCGTTAAATAGGTAATC 93342
|| ||||| || || || |||| | ||||
Sbjct 3179 AGAGTTTCAATTGCATTGAATAAGAAATC 3207
Score = 125 bits (138), Expect = 8e-24
Identities = 107/132 (81%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 93590 TCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCT 93649
|| |||||||| ||||||||||||||||||| |||||||| ||||| | |||||| |||
Sbjct 4167 TCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGCCATATATCT 4226
Query 93650 TGATATTGAATTGGAAATATGACAAAACGATTAGGGTTATCTTTTAGTAACGGCTCTAGT 93709
||||||| ||||| ||||| |||||||| |||| || || | | | || || |||
Sbjct 4227 GGATATTGGATTGGGAATATAACAAAACGTCTAGGATTTTCCCTCAACAGGGGTTCAAGT 4286
Query 93710 TGTGGGTCAAAC 93721
||||||||||||
Sbjct 4287 TGTGGGTCAAAC 4298
>seq54636
Length=10150
Score = 136 bits (150), Expect = 4e-27
Identities = 86/92 (93%), Gaps = 2/92 (2%)
Strand=Plus/Minus
Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322
||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct 10143 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGGGGGAGC 10084
Query 126323 GTGGGTTCGAACCCCACACCTGACAAATTATT 126354
||||||||||||||||||||||||||||| ||
Sbjct 10083 GTGGGTTCGAACCCCACACCTGACAAATTTTT 10052
>seq106232
Length=1298
Score = 132 bits (146), Expect = 5e-26
Identities = 82/87 (94%), Gaps = 2/87 (2%)
Strand=Plus/Minus
Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323
|||||||||||||||||||||||||||||||||||||| |||||||||| |||||||
Sbjct 973 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGCG 914
Query 126324 TGGGTTCGAACCCCACACCTGACAAAT 126350
|||||||||||||||||||||||||||
Sbjct 913 TGGGTTCGAACCCCACACCTGACAAAT 887
>seq106231
Length=1271
Score = 132 bits (146), Expect = 5e-26
Identities = 82/87 (94%), Gaps = 2/87 (2%)
Strand=Plus/Minus
Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323
|||||||||||||||||||||||||||||||||||||| |||||||||| |||||||
Sbjct 966 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGCG 907
Query 126324 TGGGTTCGAACCCCACACCTGACAAAT 126350
|||||||||||||||||||||||||||
Sbjct 906 TGGGTTCGAACCCCACACCTGACAAAT 880
>seq15483
Length=15763
Score = 132 bits (146), Expect = 5e-26
Identities = 95/107 (89%), Gaps = 3/107 (3%)
Strand=Plus/Plus
Query 126247 TTTTGCGCTTCTATTTACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATC 126306
|||||| ||| ||| | |||||||||||||||||||||||||||||||||||||| ||
Sbjct 2462 TTTTGC-CTTATATAAAACGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTC 2520
Query 126307 TGGTTCCC--TCGGGAGCGTGGGTTCGAACCCCACACCTGACAAATT 126351
|||||||| ||||||||||||||||||||||||||||||| |||
Sbjct 2521 TGGTTCCCGAGAGGGAGCGTGGGTTCGAACCCCACACCTGACATATT 2567
>seq53754
Length=5221
Score = 131 bits (144), Expect = 2e-25
Identities = 80/84 (95%), Gaps = 2/84 (2%)
Strand=Plus/Plus
Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323
|||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||
Sbjct 3223 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGATTGGGAGCG 3282
Query 126324 TGGGTTCGAACCCCACACCTGACA 126347
||||||||||||||||||||||||
Sbjct 3283 TGGGTTCGAACCCCACACCTGACA 3306
>seq38900
Length=28073
Score = 129 bits (142), Expect = 7e-25
Identities = 80/85 (94%), Gaps = 2/85 (2%)
Strand=Plus/Minus
Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323
|||||||||||||||||||||||||||||||||||||| |||||||||| |||||||
Sbjct 2900 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGGGAGGGAGCG 2841
Query 126324 TGGGTTCGAACCCCACACCTGACAA 126348
|||||||||||||||||||||||||
Sbjct 2840 TGGGTTCGAACCCCACACCTGACAA 2816
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 555206825973360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |