Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq28904 93.3 1e-15 seq30651 84.2 5e-13 >seq28904 Length=11292 Score = 93.3 bits (102), Expect = 1e-15 Identities = 126/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 3332 ACCCCATGAAGCGAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTT 3391 |||| ||| ||||| ||||| | | |||| ||| || || |||||||||||||||| Sbjct 5483 ACCCTATGGCTCGAGTATTTCCTAAAGTCACAAAATGCACATTCCACAAATACGGTCCTT 5424 Query 3392 CGGGCTCCCTGGAAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGA 3451 |||| || || | || | ||| || || || | || || ||| | || || |||| Sbjct 5423 CGGGAACCGTGCAGAAGTTCGACGGGCTGTGTGTACTACCATTGAATATTGTAAATGAGA 5364 Query 3452 AGATCTACATTTTCCTCTGGTTCTGGTTCTACGTGCTAGCCATCATCAGCGGTATC 3507 ||||||| | ||||| |||||||||||| | ||| | || ||||||| ||| Sbjct 5363 AGATCTATGTATTCCTGTGGTTCTGGTTCATTATTCTATCAATTCTCAGCGGCATC 5308 >seq30651 Length=8376 Score = 84.2 bits (92), Expect = 5e-13 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 3410 ACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTTTCCTCT 3469 |||| | ||||||||||| ||| ||||| |||||||||||||| ||| ||||||||| Sbjct 3583 ACGACGCGCTCTGCATCCTGCCGCTCAACGTCGTCAACGAGAAGATATACGTTTTCCTCT 3524 Query 3470 GGTTCTGGTTC 3480 ||||||||||| Sbjct 3523 GGTTCTGGTTC 3513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12447565689000