Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25]
237,614 sequences; 309,419,125 total letters
Query= NC_009503.1
Length=124121
Score E
Sequences producing significant alignments: (Bits) Value
seq74 152 4e-32
seq53127 89.7 4e-13
seq18229 87.8 1e-12
seq44559 86.0 5e-12
>seq74
Length=8553
Score = 152 bits (168), Expect = 4e-32
Identities = 94/98 (96%), Gaps = 2/98 (2%)
Strand=Plus/Plus
Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391
|||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 7381 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 7440
Query 114392 AAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 114429
|||||||||||||||||||||||| ||||||| |||||
Sbjct 7441 AAAACTGATATATTGAGCCATTCGCGGTATCGCCTTAA 7478
Score = 152 bits (168), Expect = 4e-32
Identities = 94/98 (96%), Gaps = 2/98 (2%)
Strand=Plus/Plus
Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588
|||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 7381 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 7440
Query 115589 AAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 115626
|||||||||||||||||||||||| ||||||| |||||
Sbjct 7441 AAAACTGATATATTGAGCCATTCGCGGTATCGCCTTAA 7478
Score = 82.4 bits (90), Expect = 6e-11
Identities = 50/52 (96%), Gaps = 1/52 (2%)
Strand=Plus/Plus
Query 114145 TCCGTCGATTGGTTT-GATCTAATAAAAGCACTCATCCCATCACTGGTTAGA 114195
||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 7319 TCCGTCGATTGGTTTTGATCTAATAAAAGCACTCATCCCATCACTGGTCAGA 7370
Score = 82.4 bits (90), Expect = 6e-11
Identities = 50/52 (96%), Gaps = 1/52 (2%)
Strand=Plus/Plus
Query 115342 TCCGTCGATTGGTTT-GATCTAATAAAAGCACTCATCCCATCACTGGTTAGA 115392
||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 7319 TCCGTCGATTGGTTTTGATCTAATAAAAGCACTCATCCCATCACTGGTCAGA 7370
>seq53127
Length=7988
Score = 89.7 bits (98), Expect = 4e-13
Identities = 159/231 (69%), Gaps = 6/231 (3%)
Strand=Plus/Minus
Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960
|| |||||||||||||| |||||||| | || ||||||||||| ||||| || |
Sbjct 6736 CCACCTCTCAGCCGCAGTACCAGATGCAAAGTAGATTCCTTCTGAATATTGTAGTCAGAT 6677
Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020
| | || | || || | ||||| || ||||| || || | |||||||| ||
Sbjct 6676 AGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGA 6617
Query 34021 ACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACA---CTATCAGTAGATTCG 34077
| || |||||| ||| |||||| ||||| | | || |||||| || |||
Sbjct 6616 ATGCCCTCTTTATCCTGAATTTTCGCCTTAA---CATTTTCAATTGTATCAGAAGCTTCC 6560
Query 34078 CATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATT 34128
||| | || || ||||| || || ||||| || ||||| |||||||||
Sbjct 6559 ACTTCCAATGTGATAGTTTTGCCAGTCAGTGTCTTTACAAATATTTGCATT 6509
>seq18229
Length=13825
Score = 87.8 bits (96), Expect = 1e-12
Identities = 136/192 (71%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 37827 ACGCACGATCTCTTGTGGAACGCGGCTCAAATTCAGCTTGTGCGCGAGGGTAAGATGCAT 37886
|| |||||| ||| |||||| | |||||||| || || ||| ||||| |||||||||
Sbjct 3320 ACACACGATGACTTATGGAACTCAGCTCAAATACAACTGGTGAAAGAGGGCAAGATGCAT 3261
Query 37887 CAGTATATGCGCATGTATTGGTGCAAGAAAATTTTGGAATGGTCTGATGATGCTCAGAC- 37945
| | |||||||| ||||||||||| ||||| |||||| | | | || | ||
Sbjct 3260 GGTTTCCTACGCATGTACTGGTGCAAGAAGATTTTAGAATGGACCCA-GTCGCCCGAACA 3202
Query 37946 CGCGCTCAACTACGCCATTTATCTCAATGATAAGTACAGCTTGGACGGGCGTGATCCCAA 38005
|| | || | || ||||| | |||||| | ||||| | ||||| | ||||| ||
Sbjct 3201 GGCTTTGAAGTTTGCTATTTACTTGAATGATCATTACAGTGTTGACGGCAGAGATCCTAA 3142
Query 38006 CGGTTACGTCGG 38017
||||| || ||
Sbjct 3141 TGGTTATGTTGG 3130
>seq44559
Length=2984
Score = 86.0 bits (94), Expect = 5e-12
Identities = 100/135 (74%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959
||| |||| ||| ||||| || |||||||| || |||||| || |||||||| || |
Sbjct 207 ACCACCTCGCAGACGCAGTACTAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGA 148
Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019
|| || | || ||||||||||| || ||||| || || ||||||||||| ||
Sbjct 147 CAGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGG 88
Query 34020 CACGCTCTCTTTGTC 34034
| || |||||||||
Sbjct 87 GATGCCCTCTTTGTC 73
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395912538806428
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |