Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq24004 122 1e-22 >seq24004 Length=11461 Score = 122 bits (134), Expect = 1e-22 Identities = 461/721 (64%), Gaps = 28/721 (4%) Strand=Plus/Minus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 || ||||| | || | || ||||| | ||| |||| || | ||||| || || ||| Sbjct 9618 TAAATATTTGATGTAAAGGGTTCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAG 9559 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCT-TTTCCCTAATGCGTTC 114060 || || ||||| || || || | || || || | ||| | ||| ||| | ||| Sbjct 9558 GCAGTCGGCATAGGAGCTATCAATAGAGAATTGCGCAAACCATGTTTTGCTA-TCTTTTC 9500 Query 114061 CTTGAGGGCGTCCCAGTC----------GTAGTTGAGCTTTGTCTCCCCCTGCCACATAT 114110 || ||| | ||||||| |||| ||| |||||| |||||||| Sbjct 9499 TTTAAGGACAGCCCAGTCCCAAAGGTCTGTAG--GAGTTTTGTC--------CCACATAT 9450 Query 114111 CAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAA 114170 || ||||||||||||||||| ||||| || | | |||| ||||| || || Sbjct 9449 CATACTGGAGGATACCTTGGCTTGCTGGACTCCCTTGATATGTGCTGTATGCACCTTCTT 9390 Query 114171 CCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAG 114230 || || ||||| | || || || | || | | ||| ||||| ||||| || | Sbjct 9389 TTTCAGCTAATTCACAACTAGCTTCTAATGCACCATAATAAATTGTTTCAAATATTTGTT 9330 Query 114231 CATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCG 114290 ||| | | || | || || | | | || ||| | ||| |||| | Sbjct 9329 GATTGAGAAGTATTGCTTTCTCACTTTCGTAAGATATTCTCATCAACACAAACGCATCTG 9270 Query 114291 CGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCT 114350 | | || || ||||| | ||||| || | |||||||||||| || || || Sbjct 9269 CCATGCCCTGAACACCAATACCAATAGGTCTATGTCTCATATTTGAAGTTTTTGCTTCAG 9210 Query 114351 CCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGA 114410 || ||||||||||| ||| ||||| | |||| ||||| || |||| |||||||| Sbjct 9209 GGACAGGATAAAAATTAACATCAATAACTTTGTTTAAATTTTGAGTTACAATCTTTGTGA 9150 Query 114411 TTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGG 114470 |||| | | |||| ||| ||| ||| | | |||| ||| || | ||| | Sbjct 9149 TTTCTTTTAATTTTTTAAAATTAAATCTG---TTATTTTCA---ACAAACATGTTAAGTG 9096 Query 114471 CGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCG 114530 | || || || || || ||||| | ||||| | |||||| | | || || | Sbjct 9095 CTATGGAAGCAAGGTTGCACACTGCCACTTCATCTTCTGAAGTGTATTGCACAACCTCAG 9036 Query 114531 TACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACG 114590 | || | ||| || ||||| ||||| | || |||||||| |||| ||||||| | Sbjct 9035 TGCAAAGATTGCTACATTTAATAGTGCCAAGATTTTTTTGATTACTCTTTCTGTTACAAG 8976 Query 114591 CATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCC 114650 ||||||| || | ||||||||| || || |||||| ||||| | | ||| | ||||| Sbjct 8975 CATCCTTATACAACATGTATGGTGTACCAGTCTCCACTTGGGCTTCTATAATTGACTTCC 8916 Query 114651 A 114651 | Sbjct 8915 A 8915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595579355271120