Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_011357.1 Length=62147 Score E Sequences producing significant alignments: (Bits) Value seq237313 178 5e-40 seq237382 125 3e-24 >seq237313 Length=339 Score = 178 bits (196), Expect = 5e-40 Identities = 176/230 (77%), Gaps = 21/230 (9%) Strand=Plus/Plus Query 30171 ATGAGCAGGGTAACCGTTATTATCTCCGCTCTGGTTATCTGCATTATCGCCTGCCTGTCA 30230 |||||||| || |||| |||||||||||||||||||||||||| |||| |||||||||| Sbjct 86 ATGAGCAGAGTCACCGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCTGCCTGTCA 145 Query 30231 TGGGCTGTTAATCATTACCGTGATAACGCCATCGCCTACAAAGAGCAGCGCGATAAA--- 30287 |||||||||||||||||||||||||||||||| ||||||||| |||||||| ||| Sbjct 146 TGGGCTGTTAATCATTACCGTGATAACGCCATTACCTACAAAGCCCAGCGCGACAAAAAT 205 Query 30288 GCCACA----TCCATC--------------ATCGCTGATATGCAGAAGCGGCAACGTGAT 30329 |||| | | | | || |||| ||||||| ||| || |||||| Sbjct 206 GCCAGAGAACTGAAGCTGGCGAACGCGGCAATTACTGACATGCAGATGCGTCAGCGTGAT 265 Query 30330 GTAGCAGAACTTGACGCCAGATACACAAAGGAGCTTGCTGATGCTAATGC 30379 || || | || || || | |||||| |||||| | ||||||||||| || Sbjct 266 GTTGCTGCGCTCGATGCAAAATACACGAAGGAGTTAGCTGATGCTAAAGC 315 >seq237382 Length=259 Score = 125 bits (138), Expect = 3e-24 Identities = 72/74 (97%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 20410 ACCTTCAATTACACGGCTCACCTGTGGGATATCCGGTGGCTAAGACATCGTGCGAGGAAA 20469 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1 ACCTTCAACTACACGGCTCACCTGTGGGATATCCGGTGGCTAAGACGTCGTGCGAGGAAA 60 Query 20470 ACAAGGTGATTGAC 20483 |||||||||||||| Sbjct 61 ACAAGGTGATTGAC 74 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 198187997218812