Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25]
237,614 sequences; 309,419,125 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq31223 156 3e-33
seq88586 114 9e-21
seq53127 111 1e-19
seq207359 109 4e-19
seq44559 95.1 9e-15
>seq31223
Length=3647
Score = 156 bits (172), Expect = 3e-33
Identities = 168/221 (76%), Gaps = 1/221 (0%)
Strand=Plus/Plus
Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCT 15024
|| || || ||||| ||||| |||||||| || || || || ||| | | |||||
Sbjct 518 AATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCAGAAAGAGTGCGTCCGTCT 577
Query 15025 TCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCA 15084
|| ||||| || |||||| | |||||||| ||||| || ||||| |||||||||||
Sbjct 578 TCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTCT 637
Query 15085 CAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTT 15144
||||||| ||||||| |||| ||||||||| | ||| || || || |||||||||
Sbjct 638 TGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTAATGGTT 697
Query 15145 TTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAAAT 15185
||||| || || ||||| ||||| || ||||| ||||| ||
Sbjct 698 TTACCCGTAAGTGTTTTCACAAAGATCTGCAT-TTTGATAT 737
Score = 109 bits (120), Expect = 4e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| || | | ||||| || | ||||| |||||||| ||||| || ||
Sbjct 47 CCACCTCTTAAACGAAGTACTAAGTGCAAAGTAGATTCTTTTTGGATGTTATAGTCAGAC 106
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
|| | | | ||||||||||| ||||| || | || | ||| ||||| || |||
Sbjct 107 AGTGTACGACCATCTTCTAATTGCTTGCCCGCAAAAATAAGACGTTGTTGATCTGGAGGA 166
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|| ||||| ||||| ||||| ||| ||| |||| || || || | ||| ||
Sbjct 167 ATGCCTTCTTTGTCTTGGATTTTAGCTTTCACATTTTCAATTGTGTCAGAAGCTTCAACT 226
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
||||| ||||| ||||| || || || ||||| |||||||||||||||
Sbjct 227 TCTAAAGTAATTGTTTTTCCAGTGAGTGTTTTAACAAAAATTTGCATA 274
>seq88586
Length=4530
Score = 114 bits (126), Expect = 9e-21
Identities = 146/199 (73%), Gaps = 4/199 (2%)
Strand=Plus/Plus
Query 14980 GTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGTCTTCTAATTGTTTGC 15037
|| || || ||||| |||||||| || || ||| || | ||||||| |||||| |
Sbjct 2209 GTGGATTCCTTTTGAATGTTGTAGTCA--GACAATGTACGTCCATCTTCTAGTTGTTTAC 2266
Query 15038 CAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTGCTTT 15097
|||| | |||||||| || ||||| |||||| |||||||| || ||||| ||
Sbjct 2267 CAGCAAAGATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGGATTTTAGCTT 2326
Query 15098 TTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTCAGAG 15157
| ||| ||||||||||||| || || || | ||||||||||||||| || || |
Sbjct 2327 TAACATTTTCTATAGTATCAGAGGCCTCCACCTCGAGGGTAATGGTTTTACCCGTAAGGG 2386
Query 15158 TTTTTACAAAAATTTGCAT 15176
| || || |||||||||||
Sbjct 2387 TCTTGACGAAAATTTGCAT 2405
>seq53127
Length=7988
Score = 111 bits (122), Expect = 1e-19
Identities = 166/231 (72%), Gaps = 6/231 (3%)
Strand=Plus/Minus
Query 14949 GCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCT 15008
|||||||| | ||| | ||| | ||||||||||| ||||| || || || || || |
Sbjct 7649 GCCACCTCTAAGTCTGAGAACAAGGTGAAGGGTAGATTCTTTCTGGATATTATAGTC--T 7592
Query 15009 GAGAATTCTCGCG--TCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTT 15066
|| ||| ||| ||||| | ||| || || ||| | |||| | ||||| ||
Sbjct 7591 GACAATGTGCGCCCATCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGA 7532
Query 15067 GGAATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTC 15125
||||| |||||||| || ||| ||||| || ||| ||||||| ||||| | |||
Sbjct 7531 GGAATGCCTTCCTTATCTTGAATCTTTGCCTTA-ACATTTTCTATTGTATCAGAAGCTTC 7473
Query 15126 TACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
|| || || || || ||||| || ||||| || |||||||||||||||||
Sbjct 7472 CACCTCCAAAGTGATAGTTTTCCCAGTCAGCGTCTTTACAAAAATTTGCAT 7422
Score = 105 bits (116), Expect = 5e-18
Identities = 155/215 (72%), Gaps = 6/215 (3%)
Strand=Plus/Minus
Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGT 15022
||||||||||| | ||||| || || || || || || || ||| ||| || | |
Sbjct 7177 AAAACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTC--TGACAATGTGCGTCCAT 7120
Query 15023 CTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGT 15082
|||| | ||| || || ||| | |||| | |||||||| ||||| ||||||||||
Sbjct 7119 CTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGGTCTGGAGGAATGCCTTCCTTGT 7060
Query 15083 CACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATG 15141
| ||| ||||| || ||| ||||||| ||||| | ||| || || || || ||
Sbjct 7059 CTTGAATCTTTGCCTTA-ACATTTTCTATTGTATCAGAAGCTTCCACTTCCAAAGTGATA 7001
Query 15142 GTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
||||| || |||| ||||| ||||||||||||||
Sbjct 7000 GTTTTCCCAGTCAATGTTTTCACAAAAATTTGCAT 6966
Score = 100 bits (110), Expect = 2e-16
Identities = 154/215 (72%), Gaps = 6/215 (3%)
Strand=Plus/Minus
Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGT 15022
||||||||||| | ||||| || || || || || || || || ||| || | |
Sbjct 7405 AAAACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCC--GACAATGTGCGTCCAT 7348
Query 15023 CTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGT 15082
|||| | ||| || |||||| | |||| | ||||| || ||||| |||||||| |
Sbjct 7347 CTTCCAGTTGCTTTCCAGCGAAAATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTTAT 7288
Query 15083 CACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATG 15141
| ||| ||||| || ||| ||||||| ||||| | ||| || || || || ||
Sbjct 7287 CTTGAATCTTTGCCTTA-ACATTTTCTATTGTATCAGAAGCTTCCACTTCCAAAGTGATA 7229
Query 15142 GTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
||||| || ||||| || |||||||||||||||||
Sbjct 7228 GTTTTCCCAGTCAGTGTCTTTACAAAAATTTGCAT 7194
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/213 (69%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCT 15024
|||||||| || | ||||| || || || || || || || || | | | | |||
Sbjct 5809 AAAACTAAGTGCAAAGTAGATTCCTTCTGGATATTATAGTCTGACAGTGTGCGCCCATCT 5750
Query 15025 TCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCA 15084
|| ||||| || || ||| | || | | ||||| || || || |||||||||||
Sbjct 5749 TCCAATTGCTTTCCGGCGAAAATTAGTCTTTGTTGATCTGGAGGGATGCCTTCCTTGTCT 5690
Query 15085 CAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGT 15143
||| ||||| ||||| |||| || ||||| | ||| || || || || |||||
Sbjct 5689 TGAATCTTTGC-CTTTACGTTTTCGATTGTATCAGAAGCTTCCACTTCCAATGTGATGGT 5631
Query 15144 TTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
||| || || | ||||||||| || ||||||||
Sbjct 5630 TTTCCCAGTTAAAGTTTTTACGAAGATTTGCAT 5598
>seq207359
Length=487
Score = 109 bits (120), Expect = 4e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| || | | ||||| || | ||||| |||||||| |||||||| ||
Sbjct 441 CCACCTCTTAAACGAAGTACTAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGAC 382
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
|| | | | ||||||||||| ||||| || | || | ||| ||||| || |||
Sbjct 381 AGTGTACGACCATCTTCTAATTGCTTGCCCGCAAAAATAAGACGTTGTTGATCCGGAGGA 322
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|| ||||| ||||| ||||| ||| ||| |||| || || || | ||| ||
Sbjct 321 ATGCCTTCTTTGTCTTGGATTTTAGCTTTCACATTTTCAATTGTGTCAGAAGCTTCAACT 262
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
||||| ||||| ||||| || || || ||||| ||||| |||||||||
Sbjct 261 TCTAAAGTAATTGTTTTTCCAGTGAGTGTTTTAACAAAGATTTGCATA 214
Score = 96.9 bits (106), Expect = 2e-15
Identities = 144/200 (72%), Gaps = 6/200 (3%)
Strand=Plus/Minus
Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGT 15022
|| |||||||| |||||||| || ||||| || || ||||| || ||| || | |
Sbjct 198 AATACTAAATGTAGGGTAGATTCCTTTTGAATATTATAATCA--GATAATGTACGGCCAT 141
Query 15023 CTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGT 15082
|||| | |||||| |||||| | |||| | |||||| || ||||| || || ||||
Sbjct 140 CTTCCAGTTGTTTTCCAGCGAAAATCAGCCTCTGTTGATCTGGGGGAATACCCTCTTTGT 81
Query 15083 CACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATG 15141
| || ||||| || ||| |||| ||||| ||| |||||| || | ||||||
Sbjct 80 CTTGGATCTTTGCCTTC-ACATTTTCGATAGTGTCGGACGGTTCTACCTCAAGAGTAATG 22
Query 15142 GTTTTACCTGTCAGAGTTTT 15161
||||| ||||| ||||| ||
Sbjct 21 GTTTTTCCTGTAAGAGTCTT 2
>seq44559
Length=2984
Score = 95.1 bits (104), Expect = 9e-15
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027
||||| || ||||| || ||||| || || |||||||| | | | | | |||||
Sbjct 644 ACTAAGTGCAGGGTTGACTCTTTCTGAATATTGTAATCAGACAAAGTGCGACCATCTTCC 585
Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087
||||| || ||||| | || | |||||||||||| || || || ||||| ||
Sbjct 584 AATTGCTTTCCAGCAAAAATGAGACGCTGTTGGTCTGGGGGGATGCCCTCCTTATCCTGT 525
Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147
||||| ||| ||| | || || || || |||||| || | ||||||||| ||
Sbjct 524 ATTTTAGCTTTGACATTCTCGATTGTGTCAGATGGTTCTACTTCCAGGGTAATGGTCTTT 465
Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|| |||| ||||| ||||| |||||||||
Sbjct 464 CCAGTCAATGTTTTGACAAATATTTGCATA 435
Score = 95.1 bits (104), Expect = 9e-15
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027
|||||||| | ||||| |||||||| ||||| || || ||| | | | || |||
Sbjct 1328 ACTAAATGCAAAGTAGATTCTTTTTGGATGTTATAGTCCGATAGAGTGCGGCCATCCTCT 1269
Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087
|| ||||| ||||| | || | |||||||||||| ||||| || ||||||||
Sbjct 1268 AACTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGG 1209
Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147
|| || || ||| |||| ||||| ||| || || || || || ||||| ||
Sbjct 1208 ATCTTAGCCTTAACATTTTCGATAGTGTCGGATGGCTCCACCTCCAAAGTGATGGTCTTC 1149
Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|| || ||||| || ||||| || ||||||
Sbjct 1148 CCAGTAAGAGTCTTAACAAAGATCTGCATA 1119
Score = 93.3 bits (102), Expect = 3e-14
Identities = 144/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
|||||||||| | | |||| |||||||||||| || ||||| |||||||| ||
Sbjct 206 CCACCTCGCAGACGCAGTACTAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGAC 147
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
|| | | | ||||| ||||| || ||||| | || | |||||| || || |||
Sbjct 146 AGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGG 87
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|| || || ||||| ||||| ||||||| |||| |||||||| ||| ||
Sbjct 86 ATGCCCTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACT 27
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAG 15155
|| | ||||||||| || || || ||
Sbjct 26 TCCAGGGTAATGGTCTTTCCAGTTAG 1
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
|||||||||| | | ||||||||||||||||| |||||||| |||||||| ||
Sbjct 434 CCACCTCGCAGACGCAGTACTAAATGAAGGGTAGACTCTTTTTGGATGTTGTAGTCAGAC 375
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
|| | | | ||||||| || |||||||| | || | ||| ||||| || |||
Sbjct 374 AGGGTGCGACCATCTTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGTTGATCTGGGGGA 315
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|| || || || || ||| || |||||| |||| || || || || ||
Sbjct 314 ATACCCTCTTTATCTTGAATCTTAGCCTTTACATTTTCAATGGTGTCAGATGGCTCCACC 255
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|| | || || || || ||||| || || || ||||| |||||||||
Sbjct 254 TCCAGAGTTATAGTCTTGCCTGTTAGTGTCTTGACAAATATTTGCATA 207
Score = 89.7 bits (98), Expect = 4e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027
|| || |||||||| || ||||| || || ||||| || || | | | |||||
Sbjct 872 ACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCAGACAGGGTGCGGCCATCTTCC 813
Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087
| ||| || |||||| | || | ||| ||||| || |||||||||||||| || |
Sbjct 812 AGTTGCTTACCAGCGAAGATAAGACGTTGTTGATCTGGAGGAATTCCTTCCTTATCTTGA 753
Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147
|| || ||| ||| |||| || || || | || || || || || || |||||
Sbjct 752 ATCTTAGCTTTAACATTTTCAATGGTGTCTGAAGGCTCAACTTCCAAAGTTATTGTTTTT 693
Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
|| || || ||||| ||||| ||||||||
Sbjct 692 CCAGTAAGTGTTTTGACAAATATTTGCAT 664
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 356357021135990
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |