Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_011802.1 Length=41941 Score E Sequences producing significant alignments: (Bits) Value seq237313 277 5e-70 seq237567 250 7e-62 seq237382 232 2e-56 >seq237313 Length=339 Score = 277 bits (306), Expect = 5e-70 Identities = 210/248 (85%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 22084 ATGAGCAGATTAACCTCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCTGCCTGTCA 22143 ||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 86 ATGAGCAGAGTCACCGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCTGCCTGTCA 145 Query 22144 TGGGCTGTTAATCATTATCGTGATAACGCCATCACCTACAAAGTCCAGCGCGACACTGTT 22203 ||||||||||||||||| |||||||||||||| |||||||||| ||||||||||| | Sbjct 146 TGGGCTGTTAATCATTACCGTGATAACGCCATTACCTACAAAGCCCAGCGCGACAAAAAT 205 Query 22204 ACTCAAAAGCTGGCGCTGGCGAACGCGACAATTACCGATATGCAAACGCGCCAGCGTGAT 22263 | | | ||| ||||||||||||| ||||||| || ||||| | ||| ||||||||| Sbjct 206 GCCAGAGAACTGAAGCTGGCGAACGCGGCAATTACTGACATGCAGATGCGTCAGCGTGAT 265 Query 22264 GTAGCAGAACTTGACGCCAGATACACAAAGGAGCTTGCTGATGCGAAAGCTGAGAATGAT 22323 || || | || || || | |||||| |||||| | |||||||| |||||||| |||||| Sbjct 266 GTTGCTGCGCTCGATGCAAAATACACGAAGGAGTTAGCTGATGCTAAAGCTGAAAATGAT 325 Query 22324 GCTCTTCG 22331 ||||| || Sbjct 326 GCTCTGCG 333 >seq237567 Length=272 Score = 250 bits (276), Expect = 7e-62 Identities = 158/169 (93%), Gaps = 3/169 (2%) Strand=Plus/Plus Query 21237 CTTCGTGAGGATGGG-GGCAAGAGGTTGCGCTAACAACCTCCTGCCGTTTTGCCCGTGCA 21295 |||||||| ||| |||| ||||| ||||||||||||||||||||||||||||||||| Sbjct 14 CTTCGTGAAAGCGGGTGGCAGGAGGTCGCGCTAACAACCTCCTGCCGTTTTGCCCGTGCA 73 Query 21296 TATCGGTCACGAACAAATCTGATTACTAAACACAGTAGCCTGGATTTGTTCTATCAGTAA 21355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 74 TATCGGTCACGAACAAATCTGATTACTAAACACAGTAGCCTGGATTTGTTCTATCAGTAA 133 Query 21356 TCGACCTTATTCCTAATTAAATAGAGCAAATCCCCTCAATGAAGGGGTA 21404 |||||||||||||||||||||||||||||||||||| | || |||||| Sbjct 134 TCGACCTTATTCCTAATTAAATAGAGCAAATCCCCTTATTG--GGGGTA 180 >seq237382 Length=259 Score = 232 bits (256), Expect = 2e-56 Identities = 151/166 (91%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 18887 AAGAAAGCGTCGATCGAGCTTTAACGTGCGCTAACTGCGGTCAGAAGCTGCATGTGCTGG 18946 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 94 AAGAAAGCGTCGAGCGAGCTTTAACGTGCGCTAACTGCGGTCAGAAGCTGCATGTGCTGG 153 Query 18947 AAGTTCATGTATGTGAAGCGTGCTGCGCAGAACTGATGAGCGATCCGAATAGCTCAATGT 19006 ||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct 154 AAGTTCACGTGTGTGAGCACTGCTGCGCAGAACTGATGAGCGATCCGAATAGCTCGATGC 213 Query 19007 ACGAGGAAAAAGACGATGGCTAAACCAGCGCGAAGGAAATGCAAAA 19052 |||||||| |||| ||||||||||||||||||||| ||| |||| Sbjct 214 ACGAGGAAGAAGATGATGGCTAAACCAGCGCGAAGACGATGTAAAA 259 Score = 91.5 bits (100), Expect = 4e-14 Identities = 56/60 (93%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 18454 ACCTTCAACTACACGGCTCACCTGTGGGATATCCGGTGGCTTAGAGAACGTGCGAGGAAA 18513 ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct 1 ACCTTCAACTACACGGCTCACCTGTGGGATATCCGGTGGCTAAGACGTCGTGCGAGGAAA 60 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133711243901204