Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_011976.1 Length=43016 Score E Sequences producing significant alignments: (Bits) Value seq237382 340 5e-89 seq237313 340 5e-89 seq237567 221 3e-53 >seq237382 Length=259 Score = 340 bits (376), Expect = 5e-89 Identities = 214/231 (93%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 37536 ACCTTCAATTACACGGCTCACCTGTGGGATATCCGGTGGCTTAGAGAGCGCGCGAGGAAA 37595 |||||||| |||||||||||||||||||||||||||||||| ||| || ||||||||| Sbjct 1 ACCTTCAACTACACGGCTCACCTGTGGGATATCCGGTGGCTAAGACGTCGTGCGAGGAAA 60 Query 37596 ACGCGATGATTGACCCCAATCGAAGTTACGAACAAGAAAGTGTCGAGCGAGCTTTAACGT 37655 || | ||||||||| ||||||||||||||||||||||| ||||||||||||||||||| Sbjct 61 ACAAGGTGATTGACCAAAATCGAAGTTACGAACAAGAAAGCGTCGAGCGAGCTTTAACGT 120 Query 37656 GCGCTAACTGCGGTCAGAAGCTGCATGTGCTGGAAGTTCATGTGTGTGAGCACTGCTGCG 37715 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 121 GCGCTAACTGCGGTCAGAAGCTGCATGTGCTGGAAGTTCACGTGTGTGAGCACTGCTGCG 180 Query 37716 CAGAACTGATGAGCGATCCGAATAACTCAATGTACGAGGAAGAAGACGATG 37766 |||||||||||||||||||||||| ||| ||| ||||||||||||| |||| Sbjct 181 CAGAACTGATGAGCGATCCGAATAGCTCGATGCACGAGGAAGAAGATGATG 231 >seq237313 Length=339 Score = 340 bits (376), Expect = 5e-89 Identities = 263/315 (83%), Gaps = 21/315 (7%) Strand=Plus/Plus Query 40374 CTGGTTATGGTCAGTTCGAGCATAAGGCTGACAGCCTGATTGCAAAATTCAAAGAAGCTG 40433 |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| | Sbjct 1 CTGGTTATGGTCAGTTCGAGCAAAAGGCTAACAGCCTGATTGCAAAATTCAAAGAAGCGG 60 Query 40434 GCGGAACGGTCAGAGAGATTGAGGTATGAGCAGAGTAACCGCGATTATCTCCGCTCTGGT 40493 |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 61 GCGGAACGGTCAGAGAGATTGATGTATGAGCAGAGTCACCGCGATTATCTCCGCTCTGGT 120 Query 40494 TATCTGCATCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACGCCACCGC 40553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 121 TATCTGCATCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACGCCATTAC 180 Query 40554 CTACAAAGAGCAGCGCGATAAA---GCCACA----TCCATC--------------ATCGC 40592 |||||||| |||||||| ||| |||| | | | | || | Sbjct 181 CTACAAAGCCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTGGCGAACGCGGCAATTAC 240 Query 40593 TGATATGCAGAAGCGTCAACGTGATGTAGCAGAACTCGACGCCAGATACACAAAGGAGCT 40652 ||| ||||||| |||||| |||||||| || | ||||| || | |||||| |||||| | Sbjct 241 TGACATGCAGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATACACGAAGGAGTT 300 Query 40653 TGCTGATGCTAACGC 40667 ||||||||||| || Sbjct 301 AGCTGATGCTAAAGC 315 >seq237567 Length=272 Score = 221 bits (244), Expect = 3e-53 Identities = 211/264 (80%), Gaps = 11/264 (4%) Strand=Plus/Plus Query 39508 TTCGTGAAAATGGGCGGCAAGAGACTGCGCTAACAGCCTCCTGCCTGATTTGCTCATGCC 39567 ||||||||| ||| |||| ||| ||||||||| ||||||||| | ||||| | ||| Sbjct 15 TTCGTGAAAGCGGGTGGCAGGAGGTCGCGCTAACAACCTCCTGCC-GTTTTGCCCGTGCA 73 Query 39568 -ATTAGTCACGAACAAACCACGTTACTAATCACTGTATCCTGGATTTGTTCTTTCCAATA 39626 || |||||||||||| | ||||||| ||| ||| |||||||||||||| || | Sbjct 74 TATCGGTCACGAACAAATCTGATTACTAAACACAGTAGCCTGGATTTGTTCTATCAGTAA 133 Query 39627 TCAACCA-ATTCATAAC---ATTGAACAAATCCTCACGGTCGTGAGGTAAGACATGAAAA 39682 || ||| |||| ||| || || ||||||| | | | | |||||||||||| Sbjct 134 TCGACCTTATTCCTAATTAAATAGAGCAAATCCCCTTATTGGGG--GTAAGACATGAA-- 189 Query 39683 AGATGCCAGAAAAACATGATCTGTTAACCGCCATTCTCGCGGCAAAGGAACAAGGCATCG 39742 |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct 190 -GATGCCAGAAAAACATGACCTGTTGGCCGCCATTCTCGCGGCAAAGGAACAAGGCATCG 248 Query 39743 GGGCAATCCTTGCGTTTGCAATGG 39766 |||||||||||||||||||||||| Sbjct 249 GGGCAATCCTTGCGTTTGCAATGG 272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137141537369304