Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq24004 118 1e-21 >seq24004 Length=11461 Score = 118 bits (130), Expect = 1e-21 Identities = 255/380 (67%), Gaps = 6/380 (2%) Strand=Plus/Minus Query 116235 CAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATT 116294 ||| | ||| |||| || | || || ||||| | ||||| || | |||||||||||| Sbjct 9286 CAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGGTCTATGTCTCATATT 9227 Query 116295 AGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTT 116354 || || || || ||||||||||| ||| ||||| | |||| ||||| Sbjct 9226 TGAAGTTTTTGCTTCAGGGACAGGATAAAAATTAACATCAATAACTTTGTTTAAATTTTG 9167 Query 116355 GGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATT 116414 || |||| |||||||||||| | | |||| ||| ||| ||| | | |||| Sbjct 9166 AGTTACAATCTTTGTGATTTCTTTTAATTTTTTAAAATTAAATCTG---TTATTTTCA-- 9112 Query 116415 GACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGT 116474 ||| || | ||| || || || || || || ||||| | ||||| | ||| Sbjct 9111 -ACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCATCTTCTGAAGT 9053 Query 116475 GTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATT 116534 ||| | | || || || || | ||| || ||||| ||||| | || |||||||| Sbjct 9052 GTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAGATTTTTTTGATT 8993 Query 116535 TGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGA 116594 |||| ||||||| |||||||| || | ||| ||||| || || |||||| ||||| Sbjct 8992 ACTCTTTCTGTTACAAGCATCCTTATACAACATGTATGGTGTACCAGTCTCCACTTGGGC 8933 Query 116595 CTTGAGAATAGCCTTCCATA 116614 | | ||| | |||||||| Sbjct 8932 TTCTATAATTGACTTCCATA 8913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611684976252240