Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq21383 163 3e-35 seq53127 109 6e-19 seq44559 102 9e-17 >seq21383 Length=8822 Score = 163 bits (180), Expect = 3e-35 Identities = 635/988 (64%), Gaps = 29/988 (3%) Strand=Plus/Plus Query 98734 AAAGTTACGGGGGCTTATTTTGTAGAATGGGGTGTTTACGATCGCAAATTTCCAGCAGAT 98793 |||||| ||| || || || |||||||||||||| || | | ||||| || | ||| Sbjct 1082 AAAGTTGTGGGTGCCTACTTCGTAGAATGGGGTGTCTATCCTAGGAAATTCCCCGTGGAT 1141 Query 98794 AAAGTGCCTATCCCCAATTTGACACACCTTTTGTATGGTTTTATCCCCATTTGCGGAGGC 98853 | ||||| || ||| | || || | | || || ||||| || |||||||| || Sbjct 1142 CGTATACCTATACCTAATCTTACTCATTTGCTCTACGGCTTTATTCCAATTTGCGGCGGT 1201 Query 98854 GACGGTATAAACGACAGTCTAAAACAAGTGCCGGGATCTTTTGAGACGTTACAAAAATCG 98913 ||||| || || || ||| ||||| | | || ||| | | |||| ||| Sbjct 1202 GACGGCATCAATGATAGTTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTACAGCGATCC 1261 Query 98914 TGCGATAAGAGAGATGATTTCAAGGTGAGCATCCACGATATTTACGGTGCTCTACAGAAA 98973 || | || || ||||| || ||||||||| | | || |||| ||| Sbjct 1262 TGTAGCGGCCGTGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAA 1321 Query 98974 CCACAACAGGG--TGTCTCCGATTATAACGAGCCTTACCGTGGCAATTTCGGACAGCTTA 99031 |||||| | || ||||| | | |||||||| ||| ||||| || || || | | Sbjct 1322 CCACAAAAAGGATTGTCTTCA--TGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTAA 1379 Query 99032 TGGCCATACGTAAACA---CAACCCACATCTAAAAATCCTACCCAGTATCGGTGGTTGGA 99088 || | || ||||| | ||| | | || || || || ||| ||||| |||| Sbjct 1380 TGTCACTA---AAACAAGCCCGCCCTGAATTGAAGATTCTTCCATCTATTGGTGGGTGGA 1436 Query 99089 CTCTTAGCGACCCCTTCTATTTTTTCGCCGATGATTACAAGCGCAAAGTGTTCGTAGACT 99148 | ||| ||| || |||| ||||| | || | | ||| | | | || || | | Sbjct 1437 CGCTTGCCGATCCTTTCTTCTTTTTAGTTGACAAATCTAAGAGAACACGATTTGTGCAGT 1496 Query 99149 CGGTTCGTGAATTCCTACAGGTGTGGAAATTTTTCGACGGTGTAGACATCGACTGGGAGT 99208 | || || || || | |||||||| ||||| ||||| || ||||| ||||||| Sbjct 1497 CAGTAAAGGAGTTTCTTCTAACATGGAAATTCTTCGATGGTGTTGATATCGATTGGGAGT 1556 Query 99209 TTCCTGGCGGAAAGGGGGCCAACCCTGAAGTAGGAAATCCTAATGAGGACGGAAACACTT 99268 | ||||| || || || || |||||||| | || | || || || || | || Sbjct 1557 TCCCTGGTGGCAAAGGTGCTAACCCTGACCTCGGTAGCCCA---GAAGATGGTGATTGTT 1613 Query 99269 ATGTCACACTTCTGCAAGAGCTTCGTTTGATGCTTGACGAATTGGGTGTG-GCCAATAAA 99327 |||| | | || |||| | ||| |||||| || || | | | || || || Sbjct 1614 ATGTAAGTTTGATGAAAGAATTACGTGAGATGCTGGATGA----GCTCTCAGCTAAGAAT 1669 Query 99328 CGTGTT---TACGAACTGACAAGTGCCGTGGGCGCCGGTTACGATAAAATCGACGTGGTC 99384 || |||||| | || ||| | | || || | ||||||||| | || || Sbjct 1670 GGTAAGAAATACGAATTAACTTCTGCTATTAGTGCTGGATGGGATAAAATCCAAGTTGTT 1729 Query 99385 GATTACTCTACAGCCAGTCAATATT---TGGACCATGTGTTTTTAATGAGTTACGATTTT 99441 || ||| | ||| |||| ||| |||| ||| | || || ||||||||||| || Sbjct 1730 GACTACGGCAAAGC---TCAAAATTATATGGATCATATTTTCTTGATGAGTTACGACTTC 1786 Query 99442 AAAGGCGCCTGGTCCAACACCGACT-TGGGTCATCAAACACCATTGTATGCACCATCGTG 99500 || || |||||||| || ||| | || |||||||| |||||||| || || |||| Sbjct 1787 AAGGGAGCCTGGTCAAATGAT-ACTCTTGGACATCAAACGCCATTGTACGCGCCTGCGTG 1845 Query 99501 GAACTCCGAAGAGAGATACACAACCGATTATGCGGTTAAACAGCTATTAAAGAAAAAAGT 99560 ||| || | || | |||||| | || | || || ||| | | | | | ||| Sbjct 1846 GAATCCCAAGGAAACTTACACATCTGACTTTGGAGTAAAATACTTGCTGGCGCAGGGAGT 1905 Query 99561 GCCTTCTCACAAGATTGTAGTGGGAGTCGCCATGTACGGCAGAGGATGGAGTGGAGTGCA 99620 | | || | ||||||||||| || || || ||||| || | || |||| ||| || || Sbjct 1906 GAATCCTAAGAAGATTGTAGTAGGTGTTGCTATGTATGGTCGTGGTTGGACTGGCGTTCA 1965 Query 99621 TGACTACAAAAATAATAACGTTTTTACGGGTGTGGCCACGGGACCGGTAAAAGGCACCTG 99680 ||| |||||| | || | || || || || || ||||| || ||||| || || Sbjct 1966 TGATTACAAAGACAACATTCCCTTCACAGGCAACGCTACTGGACCTGTCAAAGGAACTTG 2025 Query 99681 GGAAAACGGTGTTGTTGATTATAGGCAG 99708 | || |||| || ||||| |||||| || Sbjct 2026 GCAAGACGGAGTGGTTGACTATAGGGAG 2053 >seq53127 Length=7988 Score = 109 bits (120), Expect = 6e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || ||||| | |||| ||||||||||| ||| ||||| || ||||||||||| ||| Sbjct 6736 CCACCTCTCAGCCGCAGTACCAGATGCAAAGTAGATTCCTTCTGAATATTGTAGTCAGAT 6677 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || ||||| | || || |||||||| || || || || | | ||||| || | || Sbjct 6676 AGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGA 6617 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | || ||| || ||| || ||| ||| | | | | || || | |||||| Sbjct 6616 ATGCCCTCTTTATCCTGAATTTTCGCCTTAACATTTTCAATTGTATCAGAAGCTTCCACT 6557 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594 |||| ||||| |||||||| ||||| || || ||||| ||||||||| Sbjct 6556 TCCAATGTGATAGTTTTGCCAGTCAGTGTCTTTACAAATATTTGCATT 6509 Score = 100 bits (110), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || ||||| || |||| ||||| ||||| || ||||| || ||||||||||| ||| Sbjct 6508 CCACCTCTCAACCGCAGTACCAGGTGCAAAGTTGATTCCTTCTGAATATTGTAGTCAGAT 6449 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || ||||| | || || |||||||| || || || || | | ||||| || | || Sbjct 6448 AGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGA 6389 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGC-GTCGCCACCGTGTCGCTCGATTCCAC 46545 | | ||| || ||| ||| || | ||| | | | | | || || | |||||| Sbjct 6388 ATACCCTCTTTATCC-TGAATTTTTGCTTTAACATTTTCAATTGTATCAGAAGCTTCCAC 6330 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594 |||| ||||| || ||||| ||||| || |||||||| ||||||||| Sbjct 6329 TTCCAAAGTGATAGTCTTGCCAGTCAGTGTCTTAACAAAAATTTGCATT 6281 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || || |||| |||||| || | ||||| ||| ||||| |||||||| ||||| || Sbjct 5824 CCACCCCTTAGACGCAAAACTAAGTGCAAAGTAGATTCCTTCTGGATATTATAGTCTGAC 5765 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || |||||| | || || | ||||| |||||||| || | | || || || | || Sbjct 5764 AGTGTGCGCCCATCTTCCAATTGCTTTCCGGCGAAAATTAGTCTTTGTTGATCTGGAGGG 5705 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | || |||||||| ||||| ||| | | | | || || | |||||| Sbjct 5704 ATGCCTTCCTTGTCTTGAATCTTTGCCTTTACGTTTTCGATTGTATCAGAAGCTTCCACT 5645 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| ||||||||||| || || | ||||| || ||||||||||| Sbjct 5644 TCCAATGTGATGGTTTTCCCAGTTAAAGTTTTTACGAAGATTTGCAT 5598 >seq44559 Length=2984 Score = 102 bits (112), Expect = 9e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 46390 ATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTG 46449 |||||| ||| || |||||||| || ||||| ||||||||||| | || || | ||| Sbjct 1323 ATGCAAAGTAGATTCTTTTTGGATGTTATAGTCCGATAGAGTGCGGCCATCCTCTAACTG 1264 Query 46450 CTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTT 46509 || || || || || | ||||| ||||| | || | || ||||||||| |||||| Sbjct 1263 TTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTT 1204 Query 46510 CTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569 ||| | | | | |||||| | ||||| |||| |||||||| || || || Sbjct 1203 AGCCTTAACATTTTCGATAGTGTCGGATGGCTCCACCTCCAAAGTGATGGTCTTCCCAGT 1144 Query 46570 CAGCGTTTTAACAAAGATTTGCAT 46593 || || ||||||||||| ||||| Sbjct 1143 AAGAGTCTTAACAAAGATCTGCAT 1120 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||||| |||||| || |||| ||||| || ||| || || ||||||||||| || Sbjct 1118 CCTCCTCGTAAACGTAATACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAG 1059 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 ||||| || | || || ||||||||||| ||||| || | || || || || | || Sbjct 1058 AGAGTACGGCCATCCTCCAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGA 999 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | | ||| ||||| |||||| || | | | | ||||| | ||| || Sbjct 998 ATACCCTCTTTGTCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACT 939 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | ||||| ||||| || ||||| || || |||||||| ||||| Sbjct 938 TCTAATGTGATAGTTTTCCCTGTCAGTGTCTTTACAAAGATCTGCAT 892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563559543035280