Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25]
237,614 sequences; 309,419,125 total letters
Query= NC_013797.1
Length=108592
Score E
Sequences producing significant alignments: (Bits) Value
seq21383 248 6e-61
seq31223 113 3e-20
seq207359 107 1e-18
seq53127 104 2e-17
seq44559 93.3 3e-14
>seq21383
Length=8822
Score = 248 bits (274), Expect = 6e-61
Identities = 853/1307 (65%), Gaps = 46/1307 (4%)
Strand=Plus/Minus
Query 5817 TTGCCCAAACCGGTGTTCATTGCATTTAAAAGATCACCGTTGTCCGCGTCTATTTCCCAC 5876
|| || | ||| ||||||| ||||| | || |||||||| || ||||| | ||||||
Sbjct 2283 TTACCGAGACCCATGTTCATGGCATTCAGTAGGTCACCGTTATCAGCGTCCACTTCCCAA 2224
Query 5877 GCAAATAAACCACCCAAATTTTTGCTCACTACATACTTACCTTTTGCTACCACCGATTGA 5936
||||| | |||||| | || || | |||||| ||||| ||| | | |||||| |
Sbjct 2223 GCAAAGAGACCACCTAGCTTGTTATTTCTTACATATTTACCCTTTTCAATAACCGATCTA 2164
Query 5937 TCGTTGTCGTACGTAACTAAATCATTATT--ATCGT----AGACGTACGGAGATTGTGCA 5990
| || || || || || | ||| | | || || ||||||| || | ||| ||
Sbjct 2163 GCATTATCATAGGTTACAAGATCTCCAGTTGATGGTCTGAAGACGTAAGGGGCTTGGGCG 2104
Query 5991 ATGTTATCATA---GAATTGTACACTTTCGTCGTACCTATTTA-----CAATATCTTTAT 6042
| || || || ||| | ||||| | | | | | |||| |||| || |||
Sbjct 2103 ACATTGTCGTAATGGAACTCC-CACTTGCCTTG-AGCGATTTCATTCGCAATCTCCCTAT 2046
Query 6043 AATCGATTACGCCGCTTTCCCATGTACCTTTAACGGGAGCGCTAGCTATTCCTGTAAACG 6102
| || | || ||| || ||| || ||||| || || | |||| | ||||| || |
Sbjct 2045 AGTCAACCACTCCGTCTTGCCAAGTTCCTTTGACAGGTCCAGTAGCGTTGCCTGTGAAGG 1986
Query 6103 GATTATTGTTTTCG-ACTCGATGCACACCGCTCCAGCCGCGTCCATACATAGCCACACCT 6161
|| | |||| || | | || ||| || || |||| || || ||||||||||| ||||||
Sbjct 1985 GAATGTTGTCTTTGTAATC-ATGAACGCCAGTCCAACCACGACCATACATAGCAACACCT 1927
Query 6162 ACTACTAATTTAGTCGAATCGACATTTTGATTTAACAA-TCTGTTAATAGCAAAATGGGT 6220
||||| | || | | || || || | ||| | | ||| | |||| | |
Sbjct 1926 ACTACAATCTTCTTAGGATTCACTCCCTGCGCCAGCAAGTATTTTACTC-CAAAGTCAGA 1868
Query 6221 TGTGTAATTTTCGTTAACGTCCCACGAAGGAGCGTAAAGCGGTGTTTGAAAACCCAAATT 6280
||||||| |||| || | ||||| ||| ||||| | || |||||| || | | |
Sbjct 1867 TGTGTAAGTTTCCTTGGGATTCCACGCAGGCGCGTACAATGGCGTTTGATGTCCAAGAGT 1808
Query 6281 TTCCATGGACCAAGCGCCTTTAAAATCGTAGGTCATTACAAATATATAATCGAGATAGCG 6340
|| | ||||| || || || || ||||| |||| | || |||| ||| | |||
Sbjct 1807 ATCATTTGACCAGGCTCCCTTGAAGTCGTAACTCATCAAGAAAATATGATCCATATAATT 1748
Query 6341 TTGCGCGTCTGTATAATCGACAACGTCGATTTTGTCGTAACCGGCACCGATAGCGCTAGT 6400
||| || | || || ||||| | |||||| || | || |||| ||||| |||
Sbjct 1747 TTGAGCTTTGCCGTAGTCAACAACTTGGATTTTATCCCATCCAGCACTAATAGCAGAAGT 1688
Query 6401 TAGTTGCAATCGTTTACCTCTCtttttttCCAATTTGTTGAGCATTTCGCGTAACTCCTT 6460
|| || || ||||| |||| | | | | ||||| || ||||| || ||
Sbjct 1687 TAATTCGTATTTCTTACCATTCTTAGCTGAGAGCTCATCCAGCATCTCACGTAATTCTTT 1628
Query 6461 TAAAAGTATTGTATATGTTTTGCGATCCACTGAAGCGTTGCCCAGCGACGGGTTGGCACC 6520
| | || ||| | | ||| ||| | | || || ||||| |||||
Sbjct 1627 CATCAAACTTACATAACAATCACCATCTTCTGG---GCTACCGAGGTCAGGGTTAGCACC 1571
Query 6521 TTTACCGCCCGGAAACTCCCAATCTATGTCGACGCCGTCGAAAAATTTCCACGTTTCCAA 6580
||| || || || ||||||||||| || || || || ||||| |||||||| ||| |
Sbjct 1570 TTTGCCACCAGGGAACTCCCAATCGATATCAACACCATCGAAGAATTTCCATGTTAGAAG 1511
Query 6581 AAATTCGCGCACACTATCAACAAA-CGTATTTCGTTTTTCGAC--GTCGTTTAACTGGTA 6637
||| || || | ||||| ||| || | || || ||| ||| | |
Sbjct 1510 AAACTCCTTTACTGACTGCACAAATCGTGTTC---TCTTAGATTTGTCAACTAAAAAGAA 1454
Query 6638 AAACGGATCGCTAAGCGTCCATCCGCCTATCGATGGCAATATTGTTAAATCTGGATTGTG 6697
|| |||||| ||||||||| || || || ||||| | || | || || || | |
Sbjct 1453 GAAAGGATCGGCAAGCGTCCACCCACCAATAGATGGAAGAATCTTCAATTCAGG---GCG 1397
Query 6698 GCGCTTGATC----GCCATTAACTGTCCAAAGTTTCCTTTGTACGGTTCGTTGTAGGCCT 6753
| ||||| | | |||||| || |||||||| |||||||| || ||||| | |
Sbjct 1396 G-GCTTGTTTTAGTGACATTAATTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCATGAA- 1339
Query 6754 CGACA--CCTTTTTGTGGTTTTTGAAGCGCTCCCCATATATCATGAATGGTTACTTTGAA 6811
|||| ||||||||||||||||| | ||| ||||| ||| || || | ||||||||
Sbjct 1338 -GACAATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTGAA 1280
Query 6812 ATCTTTTCGGCCGGCGCACGATTTTTGCAACGCCTC-AAACGAACTGGGTATTTGTTGTT 6870
|| | |||||| || ||| || | || | |||| || | || | || |
Sbjct 1279 GTCCTCACGGCCGCTACAGGATCGCTGTAGTGCTTGGAAACTGCCTTCG-ATCTCTT--T 1223
Query 6871 TAAGCGCATCGTTTACACCATCGCCGCCACAAATTGGTATAAACCCGTACAACAAATGTG 6930
||| | ||| || | || || ||||| |||||||| ||||| ||||| | |||||| |
Sbjct 1222 TAAACT-ATCATTGATGCCGTCACCGCCGCAAATTGGAATAAAGCCGTAGAGCAAATGAG 1164
Query 6931 TAAGATTAGGAATGGGAATTTTGTCGGCGGGATATTGTCTATCGTAAACACCCCATTCCA 6990
|||||||||| || || || || |||| ||| ||| || ||||||||||| |
Sbjct 1163 TAAGATTAGGTATAGGTATACGATCCACGGGGAATTTCCTAGGATAGACACCCCATTCTA 1104
Query 6991 CAAAGTAAGCGCCCACAACATTATCGGTAATTTTTTCGAACGGTACATTGTTTTCCGACC 7050
| ||||| || |||||||| || | | ||| | |||||| ||| ||||| |
Sbjct 1103 CGAAGTAGGCACCCACAACTTTTCCAGATGTTTGCTTGAACGGCTTATTTTTTTCTCCCA 1044
Query 7051 ACATATATTTTATAGGATTTAAATGCGAACCGTCTGTATCGGCCACG 7097
| | |||| || |||| |||||| || || ||||||||||||
Sbjct 1043 ATGTGTATTCTAGAGGAGGTAAATGACTTCCATCGGTATCGGCCACG 997
>seq31223
Length=3647
Score = 113 bits (124), Expect = 3e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| || || | ||||| |||||| || | ||| ||||||||| |||||||| || |
Sbjct 503 CCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCAGAA 562
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
| | |||| | || |||||||| || || | ||||| ||||| || ||||| | ||
Sbjct 563 AGAGTGCGTCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGA 622
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672
| |||||| ||||| ||||| ||| | | | | || || | ||| ||
Sbjct 623 ATGCCTTCCTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACT 682
Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
||||||||||| ||||||||||| | ||||| || |||||||||||
Sbjct 683 TCCAAAGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCAT 729
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| |||| ||||| ||||| || |||||||| ||||||||| || ||||| || | |
Sbjct 47 CCACCTCTTAAACGAAGTACTAAGTGCAAAGTAGATTCTTTTTGGATGTTATAGTCAGAC 106
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
| || |||| || ||||| || || ||||||| | ||| || ||||| | ||
Sbjct 107 AGTGTACGACCATCTTCTAATTGCTTGCCCGCAAAAATAAGACGTTGTTGATCTGGAGGA 166
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672
| |||||||||||| ||||| ||| | | | | |||||| | ||| ||
Sbjct 167 ATGCCTTCTTTGTCTTGGATTTTAGCTTTCACATTTTCAATTGTGTCAGAAGCTTCAACT 226
Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
|| |||||||||||||| || || | ||||| || || || |||||
Sbjct 227 TCTAAAGTAATTGTTTTTCCAGTGAGTGTTTTAACAAAAATTTGCAT 273
>seq207359
Length=487
Score = 107 bits (118), Expect = 1e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| |||| ||||| ||||| || |||||||| ||||||||| || || || || | |
Sbjct 441 CCACCTCTTAAACGAAGTACTAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGAC 382
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
| || |||| || ||||| || || ||||||| | ||| || ||||||| ||
Sbjct 381 AGTGTACGACCATCTTCTAATTGCTTGCCCGCAAAAATAAGACGTTGTTGATCCGGAGGA 322
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672
| |||||||||||| ||||| ||| | | | | |||||| | ||| ||
Sbjct 321 ATGCCTTCTTTGTCTTGGATTTTAGCTTTCACATTTTCAATTGTGTCAGAAGCTTCAACT 262
Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
|| |||||||||||||| || || | ||||| || ||||| |||||
Sbjct 261 TCTAAAGTAATTGTTTTTCCAGTGAGTGTTTTAACAAAGATTTGCAT 215
>seq53127
Length=7988
Score = 104 bits (114), Expect = 2e-17
Identities = 153/217 (71%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 39504 ACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTC 39563
||||| || || |||||||| ||| || || |||||||| || | || ||| |
Sbjct 5813 ACGCAAAACTAAGTGCAAAGTAGATTCCTTCTGGATATTATAGTCTGACAGTGTGCGCCC 5754
Query 39564 ATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTT 39623
||| |||||||| || ||| | ||||||| | || ||||| | || | |||||| ||
Sbjct 5753 ATCTTCCAATTGCTTTCCGGCGAAAATTAGTCTTTGTTGATCTGGAGGGATGCCTTCCTT 5694
Query 39624 GTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAAT 39683
||| || ||| || | | | | ||| || | |||||| ||||| || ||
Sbjct 5693 GTCTTGAATCTTTGCCTTTACGTTTTCGATTGTATCAGAAGCTTCCACTTCCAATGTGAT 5634
Query 39684 TGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720
||||| || |||||||||||||||||||| ||||||
Sbjct 5633 GGTTTTCCCAGTTAAAGTTTTTACGAAGATTTGCATG 5597
Score = 100 bits (110), Expect = 2e-16
Identities = 151/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 39505 CGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCA 39564
||||| ||||| |||||||| ||| ||||| ||||||||||| | || ||| ||
Sbjct 6268 CGCAGCACCAAGTGCAAAGTAGATTCCTTTTGAATATTATAATCTGACAGTGTACGTCCA 6209
Query 39565 TCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTG 39624
|| |||| ||||| || ||||||| | | ||| || || | || | ||||||||||
Sbjct 6208 TCTTCCAGCTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCAGGAGGAATGCCTTCTTTG 6149
Query 39625 TCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATT 39684
|| |||||| |||| | ||| ||| || | |||||| ||||| || ||
Sbjct 6148 TCTTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAATGTGATA 6089
Query 39685 GTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
||||| || || | || ||||| || || |||||
Sbjct 6088 GTTTTGCCAGTCAGTGTCTTTACAAATATTTGCAT 6054
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| |||| | ||||| || ||||||||||| || || || |||||||| || | |
Sbjct 7192 CCACCTCTTAGACGCAAAACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCTGAC 7133
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
|| |||| |||| |||| ||| || ||| | ||||| | | || || || | ||
Sbjct 7132 AATGTGCGTCCATCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGGTCTGGAGGA 7073
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672
| |||||| ||||| || ||| |||| | ||| ||| || | ||||||
Sbjct 7072 ATGCCTTCCTTGTCTTGAATCTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACT 7013
Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
|||||||| || ||||| || || || ||||| || || || |||||
Sbjct 7012 TCCAAAGTGATAGTTTTCCCAGTCAATGTTTTCACAAAAATTTGCAT 6966
>seq44559
Length=2984
Score = 93.3 bits (102), Expect = 3e-14
Identities = 159/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| || || | ||| ||||| ||||||||||| ||||||||| || ||||| || |
Sbjct 1346 CCACCACGAAGACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTATAGTCCGAT 1287
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
| | ||| |||| || || ||||| || |||| || | |||||| || || | |||
Sbjct 1286 AGAGTGCGGCCATCCTCTAACTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGA 1227
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTA--ATCGTCGCTACTGTGTCTGCGCTTTCCA 39670
| ||| || ||||| || || ||| || ||| || ||||| | ||||
Sbjct 1226 ATGCCCTCCTTGTCTTGGATCTTAGCCTTAACATTTTCGATA--GTGTCGGATGGCTCCA 1169
Query 39671 CGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
| |||||||| || || || || || | ||| || || |||||||||||
Sbjct 1168 CCTCCAAAGTGATGGTCTTCCCAGTAAGAGTCTTAACAAAGATCTGCAT 1120
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| ||||| ||||| | |||||| ||||||||| ||||| || ||||| || || |
Sbjct 1118 CCTCCTCGTAAACGTAATACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAG 1059
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
| | || |||| |||| || || || | ||||| | ||| || ||||| | |||
Sbjct 1058 AGAGTACGGCCATCCTCCAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGA 999
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672
| || |||||||| || || ||||| | | | ||||||| | ||| ||
Sbjct 998 ATACCCTCTTTGTCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACT 939
Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
|| || || || ||||| || || | || ||||| |||||||||||
Sbjct 938 TCTAATGTGATAGTTTTCCCTGTCAGTGTCTTTACAAAGATCTGCAT 892
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346363645210862
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |