Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq24004 107 2e-18 >seq24004 Length=11461 Score = 107 bits (118), Expect = 2e-18 Identities = 462/725 (64%), Gaps = 34/725 (5%) Strand=Plus/Plus Query 112305 GAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAG 112364 ||||||||||||||||| ||| | || || || || |||||| ||||||||||||||| Sbjct 8942 GAGACTGGTACACCATACATGTTGTATAAGGATGCTTGTAACAGAAAGAGTAATCAAAAA 9001 Query 112365 AATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAA 112424 ||| | || || || || ||| || || || || | || ||| || || Sbjct 9002 AATCTTGGCACTATTAAATGTAGCAATCTTTGCACTGAGGTTGTGCAATACACTTCAGAA 9061 Query 112425 GATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAG 112484 ||||| ||| ||||| ||||| || || || || || || || ||| || Sbjct 9062 GATGAAGTGGCAGTGTGCAACCTTGCTTCCATAGCACTTAACATGTTTGT------TGAA 9115 Query 112485 ACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTA 112544 | || | |||| ||| | ||||| | | ||| | || || | ||| || |||| || Sbjct 9116 AATAACAGATTTAATTTTAAAAAATTAAAAGAAATCACAAAGATTGTAACTCAAAATTTA 9175 Query 112545 AACAGAGTTATTGATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATG 112601 |||| |||||||||| |||||||| || || ||| || | || |||||| Sbjct 9176 AACAAAGTTATTGATGTTAATTTTTATCCTGTCCCTGA---AGCAAAAACTTCAAATATG 9232 Query 112602 AGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGC 112661 ||||| | || |||||| | ||||| || || | || |||| || | ||| | Sbjct 9233 AGACATAGACCTATTGGTATTGGTGTTCAGGGCATGGCAGATGCGTT-----TGTGTTGA 9287 Query 112662 CACGCATTTGATTCCGACGAAGCGAAGGAAA------TCAATGCGCGTATATTTGAGACA 112715 | || | || ||| | ||| | || ||||| | |||||||| ||| Sbjct 9288 TGAGAATAT-CTTACGAAAGTGAGAAAGCAATACTTCTCAATCAACAAATATTTGAAACA 9346 Query 112716 ATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAA 112775 || ||| | | || | || || |||| || || || || || ||| |||| Sbjct 9347 ATTTATTATGGTGCATTAGAAGCTAGTTGTGAATTAGCTGAAAAAGAAGGTGCATACAGC 9406 Query 112776 ACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGG---AAGGT 112832 || | | | || |||||| ||||| | || || | ||||||||||| || | Sbjct 9407 ACATATCAAGGGAGTCCAGCAAGCCAAGGTATCCTCCAGTATGATATGTGGGACAAAACT 9466 Query 112833 GAGACCAAGCTTCACTACGACTGGGACGCTCTCAAGGAACGCAT--CAAGGAGAAGGGTC 112890 || | ||| | ||||||| | || || ||| || ||| | | ||| Sbjct 9467 CCTACAGACCTT---TGGGACTGGGCTGTCCTTAAAGAAAAGATAGCAA--AACATGGTT 9521 Query 112891 TTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTA 112950 | || || ||| ||||| || || ||||| || ||||| || |||||||| | || | Sbjct 9522 TGCGCAATTCTCTATTGATAGCTCCTATGCCGACTGCCTCTACTGCACAAATTCTTGGCA 9581 Query 112951 ATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAG 113010 | | ||||| |||||||||| || | || || || | |||||| | | | |||| Sbjct 9582 ACACTGAATCTTTTGAACCCTTTACATCAAATATTTACCAAAGAAGAGTCTTATCTGGAG 9641 Query 113011 AGttt 113015 | ||| Sbjct 9642 AATTT 9646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618898686442080