Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq24004 152 6e-32 >seq24004 Length=11461 Score = 152 bits (168), Expect = 6e-32 Identities = 487/747 (65%), Gaps = 24/747 (3%) Strand=Plus/Minus Query 105907 AAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAGCATTC 105966 ||| ||||| | | | |||||| | || || || | || |||||||||| |||| Sbjct 9646 AAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAGGGTTCAAAAGATTC 9587 Query 105967 ATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTT 106026 | | || || | |||||||| || ||||| || ||||| || || ||||| ||| || Sbjct 9586 AGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGAGCTATCAATAGAGAATT 9527 Query 106027 ACGAAGACCCTTTTCCTTG--ATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGAGCTTG 106084 || | ||| | || ||| || ||| || || ||| ||||||| | || | Sbjct 9526 GCGCAAACCATGTT--TTGCTATCTTTTCTTTAAGGACAGCCCAGTCCCAA---AGGTCT 9472 Query 106085 GTTTCACCTT---CCCACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCA 106141 || | || ||||||||||| | || || | |||||| | ||| || | | Sbjct 9471 GTAGGAGTTTTGTCCCACATATCATACTGGAGGATACCTTGGCTTGCTGGACTCCCTTGA 9412 Query 106142 AATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGA 106201 |||| || | ||||| |||||| |||||||| || || || | | | | | Sbjct 9411 TATGTGCTGTATGCACCTTCTTTTTCAGCTAATTCACAACTAGCTTCTAATGCACCATAA 9352 Query 106202 TACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAG 106261 || || |||||||| || | ||| | | |||| || || | | || Sbjct 9351 TAAATTGTTTCAAATATTTGTTGATTGAGAAGTATTGCTTTCTCACTTTCGTAAGA-TAT 9293 Query 106262 CGGCA-CAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCG 106320 || ||| | ||| |||| || | || |||||||| | |||||||||||| |||| Sbjct 9292 TCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGGTCTATGTCT 9233 Query 106321 CATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCGGTT 106377 |||||| || || || ||| || ||||||||||| ||||| ||| ||| Sbjct 9232 CATATTTGAAGTTTTTGCT---TCAGGGACAGGATAAAAATTAACATCAATAACTTTGTT 9176 Query 106378 TAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGT 106437 || ||||| || ||||||||||||||||| | | ||||| | ||| ||| || | Sbjct 9175 TAAATTTTGAGTTACAATCTTTGTGATTTCTTTTAATTTTTTAAAATTAAATCTG---TT 9119 Query 106438 CTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATC 106497 | |||| ||| || | ||| || || || || | ||||| || ||| ||||| Sbjct 9118 ATTTTCA---ACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCATC 9062 Query 106498 CTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATT 106557 | ||||| | | || || || || | ||| || ||||| || || | ||| Sbjct 9061 TTCTGAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAGATT 9002 Query 106558 CTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTC 106617 ||||| ||||||||| |||| || |||||||| || | |||||| || || || ||||| Sbjct 9001 TTTTTGATTACTCTTTCTGTTACAAGCATCCTTATACAACATGTATGGTGTACCAGTCTC 8942 Query 106618 CGTCTGTGACTTGAGAATTGCCTTCCA 106644 | || | | | ||||| |||||| Sbjct 8941 CACTTGGGCTTCTATAATTGACTTCCA 8915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588228453777360