Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_016160.1 Length=36661 Score E Sequences producing significant alignments: (Bits) Value seq237567 455 8e-124 seq237382 372 7e-99 seq237313 340 4e-89 >seq237567 Length=272 Score = 455 bits (504), Expect = 8e-124 Identities = 264/272 (97%), Gaps = 0/272 (0%) Strand=Plus/Plus Query 33934 TTCTACACATGACCTTCGTGAAAGCGGGTGGCAAGAGGCTGCGCTAACAACCTCCTGCCG 33993 || |||||||||||||||||||||||||||||| |||| |||||||||||||||||||| Sbjct 1 TTTTACACATGACCTTCGTGAAAGCGGGTGGCAGGAGGTCGCGCTAACAACCTCCTGCCG 60 Query 33994 TTTTGCCAGTGCATATCGGTCACGAACAAATCTGATTACTAAACACAGTAACCTGGATTT 34053 ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 61 TTTTGCCCGTGCATATCGGTCACGAACAAATCTGATTACTAAACACAGTAGCCTGGATTT 120 Query 34054 GTTCTATCAGTAATCGACCTTATTCCTAATTAAATAGAGCAAATCCCCTTATTGGGGGTA 34113 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 GTTCTATCAGTAATCGACCTTATTCCTAATTAAATAGAGCAAATCCCCTTATTGGGGGTA 180 Query 34114 AGACATGAAGATGCCAGaaaaaaaTGACCTGTTAGCCGCCATTCTCGCGGCAAAGGAACA 34173 |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| Sbjct 181 AGACATGAAGATGCCAGAAAAACATGACCTGTTGGCCGCCATTCTCGCGGCAAAGGAACA 240 Query 34174 AGGCATCGGGGCAATCCTTGCGTTTGCAATGG 34205 |||||||||||||||||||||||||||||||| Sbjct 241 AGGCATCGGGGCAATCCTTGCGTTTGCAATGG 272 >seq237382 Length=259 Score = 372 bits (412), Expect = 7e-99 Identities = 221/231 (96%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 31309 ACCTTCAACTACACGGCTCACCTGTGGGATATCCGGTGGCTTAGAGAACGTGCGAGGAAT 31368 ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| Sbjct 1 ACCTTCAACTACACGGCTCACCTGTGGGATATCCGGTGGCTAAGACGTCGTGCGAGGAAA 60 Query 31369 ACAAGGTGATTGACCCAAATCGAAGTTACGAACAAGAAAGCGTCGAGCGGGCTTTAACGT 31428 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct 61 ACAAGGTGATTGACCAAAATCGAAGTTACGAACAAGAAAGCGTCGAGCGAGCTTTAACGT 120 Query 31429 GCGCTAACTGCGGTCAGAAGCTGCATGTGCTGGAAGTTCACGTGTGTGAGCACTGCTGCG 31488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 GCGCTAACTGCGGTCAGAAGCTGCATGTGCTGGAAGTTCACGTGTGTGAGCACTGCTGCG 180 Query 31489 CAGAACTGATGAGCGATCCGAATAGCTCAATGTACGAGGAAGAAGACGATG 31539 |||||||||||||||||||||||||||| ||| ||||||||||||| |||| Sbjct 181 CAGAACTGATGAGCGATCCGAATAGCTCGATGCACGAGGAAGAAGATGATG 231 >seq237313 Length=339 Score = 340 bits (376), Expect = 4e-89 Identities = 263/315 (83%), Gaps = 21/315 (7%) Strand=Plus/Plus Query 34813 CTGGTTATGGTCAGTTCGAGCATAAGGCTGACAGCCTGATTGCAAAATTCAAAGAGGCTG 34872 |||||||||||||||||||||| |||||| ||||||||||||||||||||||||| || | Sbjct 1 CTGGTTATGGTCAGTTCGAGCAAAAGGCTAACAGCCTGATTGCAAAATTCAAAGAAGCGG 60 Query 34873 GCGGAACGGTCAGAGAGATTGAGGTATGAGCAGAGTCACCGCGATTATCTCCGCTCTGGT 34932 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 61 GCGGAACGGTCAGAGAGATTGATGTATGAGCAGAGTCACCGCGATTATCTCCGCTCTGGT 120 Query 34933 TATCTGCATCATCGTCTGCCTGTCATGGGCGGTTAATCATTACCGTGATAACGCCATCTC 34992 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | Sbjct 121 TATCTGCATCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACGCCATTAC 180 Query 34993 CTACAAAGAGCAGCGCGATAAA---GCCACA----TCCATC--------------ATCGC 35031 |||||||| |||||||| ||| |||| | | | | || | Sbjct 181 CTACAAAGCCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTGGCGAACGCGGCAATTAC 240 Query 35032 TGATATGCAGAAGCGTCAACGTGATGTAGCAGAACTCGACGCCAGATACACAAAGGAGCT 35091 ||| ||||||| |||||| |||||||| || | ||||| || | |||||| |||||| | Sbjct 241 TGACATGCAGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATACACGAAGGAGTT 300 Query 35092 TGCTGATGCTAACGC 35106 ||||||||||| || Sbjct 301 AGCTGATGCTAAAGC 315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 116862918774164