Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25]
237,614 sequences; 309,419,125 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq32346 141 1e-28
>seq32346
Length=5591
Score = 141 bits (156), Expect = 1e-28
Identities = 158/211 (75%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 37444 TTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCT 37503
||||||| || ||||||| |||| ||||| || || |||| |||||| ||||| || |
Sbjct 3810 TTATATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATAGCAATTT 3869
Query 37504 GAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTA 37563
|||||||||| || ||||| ||||||| | |||||| || | |||| | || | |
Sbjct 3870 GAAAACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGTGAAAAACGCTCCACCA 3929
Query 37564 AGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAAT 37623
|||| |||||||| || |||||| ||| |||||||| || | |||| || |||||||
Sbjct 3930 AGTTCTCATTAACAATACCATCAGAAGCCGCAAAGAATGCTAAGACATGCTTGATAAAAT 3989
Query 37624 GTCTTTCATCATTTGATAATTTTTTCCAATC 37654
|| | ||| || | |||| | | ||||||
Sbjct 3990 GTTTCTCACAATCTTTTAATGTCTCCCAATC 4020
Score = 86.0 bits (94), Expect = 7e-12
Identities = 172/250 (69%), Gaps = 5/250 (2%)
Strand=Plus/Plus
Query 37170 AATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAG 37229
||||| || |||||| || | | |||| |||| ||| || | ||||||| ||
Sbjct 2952 AATAAGAATACAAAATTACGAAACATACCT-CATCCCTAGAAATAAGTTCATTACTGAAA 3010
Query 37230 GTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAA 37289
|| ||||| ||||| | ||||| |||||| | ||||||||||| ||||| || ||
Sbjct 3011 GTCAATCCGGGCATCAGACCTCGTTTTTTCAACCAAAATATTGAAGCAAAGCTGCCTGAG 3070
Query 37290 AAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAA 37349
|| || || || |||||||||||||| || | | |||| || || || | || |
Sbjct 3071 AAAAATATTCCCTCAACTGCTGCAAAAGCAATTATACGTTCTCCAAATGT--AGCTGTCT 3128
Query 37350 T-CAG-AAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAA 37407
| | | ||||| | | | ||| |||||||| ||||||||| | |||||||
Sbjct 3129 TGCTGCCGATCCACTGTAACGCCCAGTCTGCCTTCTTCTTAACACATGGTAGAGTTTCAA 3188
Query 37408 TTGCTTTTAA 37417
|||| || ||
Sbjct 3189 TTGCATTGAA 3198
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590557515448560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |