Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_018275.1 Length=39783 Score E Sequences producing significant alignments: (Bits) Value seq237567 271 2e-68 seq237313 183 8e-42 >seq237567 Length=272 Score = 271 bits (300), Expect = 2e-68 Identities = 162/169 (96%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 36932 CTTCGTGAAAGCGGGTGGCAAGAGGCTGCGCTAACAACCTCCTGCCGTTTTGCCCGTGCA 36991 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct 14 CTTCGTGAAAGCGGGTGGCAGGAGGTCGCGCTAACAACCTCCTGCCGTTTTGCCCGTGCA 73 Query 36992 TATCGGTCACGAACAAATCTGATTACTAAACACAGTAGCCTGGATTTGTTCTATCAGTAA 37051 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 74 TATCGGTCACGAACAAATCTGATTACTAAACACAGTAGCCTGGATTTGTTCTATCAGTAA 133 Query 37052 TCGACCTTATTCCTAATTAAATAGAGCAAATCCCCTCAATGAAGGGGTA 37100 |||||||||||||||||||||||||||||||||||| | || |||||| Sbjct 134 TCGACCTTATTCCTAATTAAATAGAGCAAATCCCCTTATTG--GGGGTA 180 >seq237313 Length=339 Score = 183 bits (202), Expect = 8e-42 Identities = 182/238 (76%), Gaps = 22/238 (9%) Strand=Plus/Plus Query 37864 TTGATGTCATGAGTCGGTTAACCGCGATTATCTCCGCTCTGATTATCTGCATCATCGTCT 37923 ||||||| ||||| | | ||||||||||||||||||||| |||||||||||||||||| Sbjct 79 TTGATGT-ATGAGCAGAGTCACCGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCT 137 Query 37924 GTCTGTCATGGGCTGTTAATCATTACCGTGATAACGCCATCGCCTACAAAGAGCAGCGCG 37983 | |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| Sbjct 138 GCCTGTCATGGGCTGTTAATCATTACCGTGATAACGCCATTACCTACAAAGCCCAGCGCG 197 Query 37984 ATAAA---GCCACA------------------TCCACAATCGCTGACATGCAGAAGCGTC 38022 | ||| |||| | | |||| |||||||||||| ||||| Sbjct 198 ACAAAAATGCCAGAGAACTGAAGCTGGCGAACGCGGCAATTACTGACATGCAGATGCGTC 257 Query 38023 AACGTGACGTAGCAAAACTCGACGCCAGATATACAAAGGAGCTTGCTGATGCTAACGC 38080 | ||||| || || ||||| || | ||| || |||||| | ||||||||||| || Sbjct 258 AGCGTGATGTTGCTGCGCTCGATGCAAAATACACGAAGGAGTTAGCTGATGCTAAAGC 315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126825129199660