Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_018279.1 Length=49116 Score E Sequences producing significant alignments: (Bits) Value seq237313 334 2e-87 seq237567 288 3e-73 seq237382 255 2e-63 >seq237313 Length=339 Score = 334 bits (370), Expect = 2e-87 Identities = 223/248 (90%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 46754 ATGAGCAGAGTAACCGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCTGCCTGTCA 46813 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 86 ATGAGCAGAGTCACCGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCTGCCTGTCA 145 Query 46814 TGGGCTGTTAATCATTACCGTGATAATGCAATCGCCTACAAAGAGCAGCGCGATAAAAAA 46873 |||||||||||||||||||||||||| || || ||||||||| |||||||| ||||| Sbjct 146 TGGGCTGTTAATCATTACCGTGATAACGCCATTACCTACAAAGCCCAGCGCGACAAAAAT 205 Query 46874 GTCAGTGAACTGAAGCAGGCGACCGCCACCATTACTGACATGCAGCAGCGCCAGCGTGAT 46933 | ||| |||||||||| ||||| ||| | ||||||||||||||| ||| ||||||||| Sbjct 206 GCCAGAGAACTGAAGCTGGCGAACGCGGCAATTACTGACATGCAGATGCGTCAGCGTGAT 265 Query 46934 GCTGATGCACTCGATGCTAAATACACGAAGGAGTTAGCTGATGCGAAAGCTGAAAATGAT 46993 | || ||| |||||||| |||||||||||||||||||||||||| ||||||||||||||| Sbjct 266 GTTGCTGCGCTCGATGCAAAATACACGAAGGAGTTAGCTGATGCTAAAGCTGAAAATGAT 325 Query 46994 GCTCTTCG 47001 ||||| || Sbjct 326 GCTCTGCG 333 >seq237567 Length=272 Score = 288 bits (318), Expect = 3e-73 Identities = 174/183 (95%), Gaps = 3/183 (2%) Strand=Plus/Plus Query 45892 TTCTACACATGACCTTCGTGAAAGCGGGTGGCAAGAGGTTGCGCTAACAACCTCGTGCCG 45951 || |||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||| Sbjct 1 TTTTACACATGACCTTCGTGAAAGCGGGTGGCAGGAGGTCGCGCTAACAACCTCCTGCCG 60 Query 45952 TTTTGCCCGTGCATATCGGTCACGAACAAATCTGATTACTAAACACAGTAGCCTGGATTT 46011 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 TTTTGCCCGTGCATATCGGTCACGAACAAATCTGATTACTAAACACAGTAGCCTGGATTT 120 Query 46012 GTTCTATCAGTAATCGACCTTATTCCTAATTAAATAGAGCAAATCCCCTCAATAAAGGGG 46071 ||||||||||||||||||||||||||||||||||||||||||||||||| || |||| Sbjct 121 GTTCTATCAGTAATCGACCTTATTCCTAATTAAATAGAGCAAATCCCCT---TATTGGGG 177 Query 46072 GTA 46074 ||| Sbjct 178 GTA 180 >seq237382 Length=259 Score = 255 bits (282), Expect = 2e-63 Identities = 156/166 (94%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 43773 AAGAAAGCGTCGAGCGAGCTTTAACGTGCGCTAACTGCGGTCAGAAGCTGCATGTGCTGG 43832 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 94 AAGAAAGCGTCGAGCGAGCTTTAACGTGCGCTAACTGCGGTCAGAAGCTGCATGTGCTGG 153 Query 43833 AAGTTCATGTATGTGAAGCGTGCTGCGCAGAACTGATGAGCGATCCGAATAGCTCAATGT 43892 ||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct 154 AAGTTCACGTGTGTGAGCACTGCTGCGCAGAACTGATGAGCGATCCGAATAGCTCGATGC 213 Query 43893 ACGAGGAAGAAGACGATGGCTAAACCAGCGCGAAGACGATGCAAAA 43938 ||||||||||||| ||||||||||||||||||||||||||| |||| Sbjct 214 ACGAGGAAGAAGATGATGGCTAAACCAGCGCGAAGACGATGTAAAA 259 Score = 104 bits (114), Expect = 7e-18 Identities = 59/60 (98%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 43340 ACCTTCAACTACACGGCTCACCTGTGGGATATCCGGTGGCTAAGACATCGTGCGAGGAAA 43399 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1 ACCTTCAACTACACGGCTCACCTGTGGGATATCCGGTGGCTAAGACGTCGTGCGAGGAAA 60 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156606458444104