Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_019501.1 Length=39646 Score E Sequences producing significant alignments: (Bits) Value seq237567 468 1e-127 seq237313 361 1e-95 seq237382 273 6e-69 >seq237567 Length=272 Score = 468 bits (518), Expect = 1e-127 Identities = 267/272 (98%), Gaps = 0/272 (0%) Strand=Plus/Plus Query 16278 TTCTACACATGACCTTCGTGAAAGCGGGTGGCAAGAGGCTGCGCTAACAACCTCCTGCCG 16337 || |||||||||||||||||||||||||||||| |||| |||||||||||||||||||| Sbjct 1 TTTTACACATGACCTTCGTGAAAGCGGGTGGCAGGAGGTCGCGCTAACAACCTCCTGCCG 60 Query 16338 TTTTGCCCGTGCATATCGGTCACGAACAAATCTGATTACTAAACACAGTAGCCTGGATTT 16397 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 TTTTGCCCGTGCATATCGGTCACGAACAAATCTGATTACTAAACACAGTAGCCTGGATTT 120 Query 16398 GTTCTATCAGTAATCGACCTTATTCCTAATTAAATAGAGCAAATCCCCTTATTGGGGGTA 16457 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 GTTCTATCAGTAATCGACCTTATTCCTAATTAAATAGAGCAAATCCCCTTATTGGGGGTA 180 Query 16458 AGACATGAAGATGCCAGAAAAACATGACCTGTTAGCCGCCATTCTCGCGGCAAAGGAACA 16517 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 181 AGACATGAAGATGCCAGAAAAACATGACCTGTTGGCCGCCATTCTCGCGGCAAAGGAACA 240 Query 16518 AGGCATCGGGGCAATCCTTGCGTTTGCAATGG 16549 |||||||||||||||||||||||||||||||| Sbjct 241 AGGCATCGGGGCAATCCTTGCGTTTGCAATGG 272 >seq237313 Length=339 Score = 361 bits (400), Expect = 1e-95 Identities = 268/315 (85%), Gaps = 21/315 (7%) Strand=Plus/Plus Query 17157 CTGGTTATGGCCAGTTCGAGCATAAGGCTGACAGCCTGATTGCAAAATTCAAAGAAGCAG 17216 |||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||| | Sbjct 1 CTGGTTATGGTCAGTTCGAGCAAAAGGCTAACAGCCTGATTGCAAAATTCAAAGAAGCGG 60 Query 17217 GCGGAACGGTCAGAGAGATTGATGTATGAGCAGAGTCACCGCGATTATCTCCGCTCTGGT 17276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 GCGGAACGGTCAGAGAGATTGATGTATGAGCAGAGTCACCGCGATTATCTCCGCTCTGGT 120 Query 17277 TATCTGCATCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACGCCATGAC 17336 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 121 TATCTGCATCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACGCCATTAC 180 Query 17337 CTACAAAGAACAGCGCGACAAA---GCCACA----TCCATC--------------ATCGC 17375 |||||||| |||||||||||| |||| | | | | || | Sbjct 181 CTACAAAGCCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTGGCGAACGCGGCAATTAC 240 Query 17376 TGACATGCAGAAGCATCAACGTGATGTAGCAGAACTCGACGCAAGATACACAAAGGAGCT 17435 ||||||||||| || ||| |||||||| || | ||||| |||| |||||| |||||| | Sbjct 241 TGACATGCAGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATACACGAAGGAGTT 300 Query 17436 TGCTGATGCTAACGC 17450 ||||||||||| || Sbjct 301 AGCTGATGCTAAAGC 315 >seq237382 Length=259 Score = 273 bits (302), Expect = 6e-69 Identities = 160/166 (96%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 13440 AAGAAAGCGTCGAGCGGGCTTTAACGTGCGCTAACTGCGACCAGAAGCTGCATGTGCTGG 13499 |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| Sbjct 94 AAGAAAGCGTCGAGCGAGCTTTAACGTGCGCTAACTGCGGTCAGAAGCTGCATGTGCTGG 153 Query 13500 AAGTTCACGTGTGTGAGCACTGCTGCGCAGAACTGATGAGCGATCCGAATAGCTCAATGT 13559 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 154 AAGTTCACGTGTGTGAGCACTGCTGCGCAGAACTGATGAGCGATCCGAATAGCTCGATGC 213 Query 13560 ACGAGGAAGAAGACGATGGCTAAACCAGCGCGAAGACGATGTAAAA 13605 ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 214 ACGAGGAAGAAGATGATGGCTAAACCAGCGCGAAGACGATGTAAAA 259 Score = 104 bits (114), Expect = 6e-18 Identities = 59/60 (98%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 12982 ACCTTCAACTACACGGCTCACCTGTGGGATATCCGGTGGCTAAGACATCGTGCGAGGAAA 13041 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1 ACCTTCAACTACACGGCTCACCTGTGGGATATCCGGTGGCTAAGACGTCGTGCGAGGAAA 60 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126387966218144