Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_019704.1 Length=44375 Score E Sequences producing significant alignments: (Bits) Value seq234085 194 5e-45 seq235925 105 2e-18 >seq234085 Length=323 Score = 194 bits (214), Expect = 5e-45 Identities = 236/322 (73%), Gaps = 0/322 (0%) Strand=Plus/Plus Query 1103 TTTCTGGGTGATAAGCGTATTGAGGGTTCTGTATGGCCGAAATCCATTCGCGGATCTACA 1162 || |||||||| | ||||||||| || || || ||||| || ||||| || || || || Sbjct 2 TTCCTGGGTGACATGCGTATTGAAGGCTCGGTCTGGCCAAAGTCCATCCGTGGCTCCACG 61 Query 1163 CCGAAAGTCAAAGGTATGTGCCAGATAGAAAGAGCTGCTAAGGAGTCTGAACATTTTCTT 1222 || ||||| | ||| | || ||||| || | || || | || || |||||| | Sbjct 62 CCAAAAGTGAGAGGCACCTGTCAGATTGAGCGTGCAGCCAGTGAATCCCCGCATTTTATG 121 Query 1223 CGGTTCCATGTTCCATGCCCACACTGTGGGGAAGAGCAGTATCTGAAATTCGGTGATAAA 1282 || || |||||| | ||||| || || ||||| ||||||||||| ||||| || || ||| Sbjct 122 CGTTTTCATGTTGCCTGCCCGCATTGCGGGGAGGAGCAGTATCTTAAATTTGGCGACAAA 181 Query 1283 GAGACACCATTTGGCTTCAAATGGTCTCCGGGAGAACCTGCCAGCGTTTACTACCTCTGT 1342 ||||| || |||||| |||||||| | |||| || || ||||||| | || ||||| Sbjct 182 GAGACGCCGTTTGGCCTCAAATGGACGCCGGATGACCCCTCCAGCGTGTTTTATCTCTGC 241 Query 1343 GAACACAATGCCTGTGTGATTAAACAACAGGAGCTGGAATTTCTGGAGGCCAGGTATATT 1402 || || |||||||| || || || ||||||||||| ||| || ||| | ||||| Sbjct 242 GAGCATAATGCCTGCGTCATCCGCCAGCAGGAGCTGGACTTTACTGATGCCCGTTATATC 301 Query 1403 TGTGATGAAACAGGTATCTGGA 1424 || || | || || ||||||| Sbjct 302 TGCGAAAAGACCGGGATCTGGA 323 >seq235925 Length=245 Score = 105 bits (116), Expect = 2e-18 Identities = 84/101 (83%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 3446 GAGCGCGATAGTGAAGGCTATGTATGCCGCTACCATCGAGAGTGAACTGGATACCCAATC 3505 |||||| | |||||||| ||||||||||| ||||| |||||||| |||||||| || || Sbjct 117 GAGCGCCGTTGTGAAGGCGATGTATGCCGCCACCATTGAGAGTGAGCTGGATACGCAGTC 58 Query 3506 GGCGATGGACTTTATTCTCGGCGCGGATAATAAAGAGCAGC 3546 |||||||| |||||||| |||||| | | | | ||||||| Sbjct 57 AGCGATGGATTTTATTCTGGGCGCGAACAGTCAGGAGCAGC 17 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141478066507116