Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_019705.1 Length=38759 Score E Sequences producing significant alignments: (Bits) Value seq237567 450 3e-122 seq237313 361 1e-95 seq237382 199 1e-46 >seq237567 Length=272 Score = 450 bits (498), Expect = 3e-122 Identities = 255/259 (98%), Gaps = 0/259 (0%) Strand=Plus/Plus Query 35056 CTTCGTGAAAGCGGGTGGCAGGAGGTTGCGCTAACAACCTCATGCCGTTTTGCCCGTGCA 35115 |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct 14 CTTCGTGAAAGCGGGTGGCAGGAGGTCGCGCTAACAACCTCCTGCCGTTTTGCCCGTGCA 73 Query 35116 TATCGGTCACGAACAAATCTGATTACTAAACACAGTAGCCTGGATTTGTTCTATCAGTAA 35175 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 74 TATCGGTCACGAACAAATCTGATTACTAAACACAGTAGCCTGGATTTGTTCTATCAGTAA 133 Query 35176 TCGACCTTATTCCTAATTAAATAGAGCAAATCCCCTTATTGGGGGTAAGACATGAAGATG 35235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 134 TCGACCTTATTCCTAATTAAATAGAGCAAATCCCCTTATTGGGGGTAAGACATGAAGATG 193 Query 35236 CCAGaaaaaaaTGACCTGTTAGCCGCCATTCTCGCGGCAAAGGAACAAGGCATCGGGGCA 35295 ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 194 CCAGAAAAACATGACCTGTTGGCCGCCATTCTCGCGGCAAAGGAACAAGGCATCGGGGCA 253 Query 35296 ATCCTTGCGTTTGCAATGG 35314 ||||||||||||||||||| Sbjct 254 ATCCTTGCGTTTGCAATGG 272 >seq237313 Length=339 Score = 361 bits (400), Expect = 1e-95 Identities = 268/315 (85%), Gaps = 21/315 (7%) Strand=Plus/Plus Query 35922 CTGGTTATGGTCAGTTCGAGCATAAGGCTGACAGCCTGATTGCAAAATTCAAAGAGGCTG 35981 |||||||||||||||||||||| |||||| ||||||||||||||||||||||||| || | Sbjct 1 CTGGTTATGGTCAGTTCGAGCAAAAGGCTAACAGCCTGATTGCAAAATTCAAAGAAGCGG 60 Query 35982 GCGGAACGGTCAGAGAGATTGAGGTATGAGCAGAGTCACCGCGATTATCTCCGCTCTGGT 36041 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 61 GCGGAACGGTCAGAGAGATTGATGTATGAGCAGAGTCACCGCGATTATCTCCGCTCTGGT 120 Query 36042 TATCTGCATCATCGTTTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACGCCATTAC 36101 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 TATCTGCATCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACGCCATTAC 180 Query 36102 CTACAAAGCCCAGCGCGACAAA---GCCACA----TCCATC--------------ATCGC 36140 |||||||||||||||||||||| |||| | | | | || | Sbjct 181 CTACAAAGCCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTGGCGAACGCGGCAATTAC 240 Query 36141 TGACATGCAGAAGCGTCAACGTGATGTAGCAGAACTTGACGCCAGATACACAAAGGAGCT 36200 ||||||||||| |||||| |||||||| || | || || || | |||||| |||||| | Sbjct 241 TGACATGCAGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATACACGAAGGAGTT 300 Query 36201 TGCTGATGCTAACGC 36215 ||||||||||| || Sbjct 301 AGCTGATGCTAAAGC 315 >seq237382 Length=259 Score = 199 bits (220), Expect = 1e-46 Identities = 127/138 (92%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 32479 AAGAAAGCGTCGAGCGAGCTTTAACGTGCGCTAACTGCGGTCAGAAGCTGCATATGCTGG 32538 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 94 AAGAAAGCGTCGAGCGAGCTTTAACGTGCGCTAACTGCGGTCAGAAGCTGCATGTGCTGG 153 Query 32539 AAGTTCACGTGTGCTCCGATTGCTGCGCAGAGCTGATGAGCGATCCGAATAGCTCAATGT 32598 ||||||||||||| | ||||||||||| ||||||||||||||||||||||| ||| Sbjct 154 AAGTTCACGTGTGTGAGCACTGCTGCGCAGAACTGATGAGCGATCCGAATAGCTCGATGC 213 Query 32599 ACGAGGAAGAAGACGATG 32616 ||||||||||||| |||| Sbjct 214 ACGAGGAAGAAGATGATG 231 Score = 104 bits (114), Expect = 6e-18 Identities = 59/60 (98%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 31986 ACCTTCAACTACACGGCTCACCTGTGGGATATCCGGTGGCTAAGACATCGTGCGAGGAAA 32045 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1 ACCTTCAACTACACGGCTCACCTGTGGGATATCCGGTGGCTAAGACGTCGTGCGAGGAAA 60 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123557575235628