Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_019706.1 Length=42780 Score E Sequences producing significant alignments: (Bits) Value seq237567 450 4e-122 seq237382 331 3e-86 seq237313 315 2e-81 >seq237567 Length=272 Score = 450 bits (498), Expect = 4e-122 Identities = 255/259 (98%), Gaps = 0/259 (0%) Strand=Plus/Plus Query 39794 CTTCGTGAAAGCTGGTGACAGGAGGTTGCGCTAACAACCTCCTGCCGTTTTGCCCGTGCA 39853 |||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct 14 CTTCGTGAAAGCGGGTGGCAGGAGGTCGCGCTAACAACCTCCTGCCGTTTTGCCCGTGCA 73 Query 39854 TATCGGTCACGAACAAATCTGATTACTAAACACAGTAGCCTGGATTTGTTCTATCAGTAA 39913 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 74 TATCGGTCACGAACAAATCTGATTACTAAACACAGTAGCCTGGATTTGTTCTATCAGTAA 133 Query 39914 TCGACCTTATTCCTAATTAAATAGAGCAAATCCCCTTATTGGGGGTAAGACATGAAGATG 39973 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 134 TCGACCTTATTCCTAATTAAATAGAGCAAATCCCCTTATTGGGGGTAAGACATGAAGATG 193 Query 39974 CCAGAAAAACATGACCTGTTAGCCGCCATTCTCGCGGCAAAGGAACAAGGCATCGGGGCA 40033 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 194 CCAGAAAAACATGACCTGTTGGCCGCCATTCTCGCGGCAAAGGAACAAGGCATCGGGGCA 253 Query 40034 ATCCTTGCGTTTGCAATGG 40052 ||||||||||||||||||| Sbjct 254 ATCCTTGCGTTTGCAATGG 272 >seq237382 Length=259 Score = 331 bits (366), Expect = 3e-86 Identities = 212/231 (92%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 37639 ACCTTCAATTACACGGCTCACCTGTGGGATATCCGGTGGCTTAGAGAACGTGCGAGGAAA 37698 |||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct 1 ACCTTCAACTACACGGCTCACCTGTGGGATATCCGGTGGCTAAGACGTCGTGCGAGGAAA 60 Query 37699 ACAAGGTGATTGACCCAAATCGAAGTTACGAACAAGGAAGTGTCGAGCGGGCTTTAACGT 37758 ||||||||||||||| |||||||||||||||||||| ||| |||||||| |||||||||| Sbjct 61 ACAAGGTGATTGACCAAAATCGAAGTTACGAACAAGAAAGCGTCGAGCGAGCTTTAACGT 120 Query 37759 GCGCTCACTGCGGTCAGAAGCTGCATGTGCTGGAAGTTCACGTGTGCTCCGATTGCTGCG 37818 ||||| |||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 121 GCGCTAACTGCGGTCAGAAGCTGCATGTGCTGGAAGTTCACGTGTGTGAGCACTGCTGCG 180 Query 37819 CAGAACTGATGAGCGATCCGAATAGCTCAATGTACGAGGAAGAAGACGATG 37869 |||||||||||||||||||||||||||| ||| ||||||||||||| |||| Sbjct 181 CAGAACTGATGAGCGATCCGAATAGCTCGATGCACGAGGAAGAAGATGATG 231 >seq237313 Length=339 Score = 315 bits (348), Expect = 2e-81 Identities = 258/318 (81%), Gaps = 27/318 (8%) Strand=Plus/Plus Query 40660 CTGGTTATGGACAGTTCGAGCATAAGGCTGACAGCCTGATTGCAAAATTCAAAGAAGCAG 40719 |||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||| | Sbjct 1 CTGGTTATGGTCAGTTCGAGCAAAAGGCTAACAGCCTGATTGCAAAATTCAAAGAAGCGG 60 Query 40720 GCGGAACGGTCAGAGAGATTGAGGTATGAGCAGAGTAACCGCGATTATCTCCGCTCTGGT 40779 |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 61 GCGGAACGGTCAGAGAGATTGATGTATGAGCAGAGTCACCGCGATTATCTCCGCTCTGGT 120 Query 40780 TATCTGCATCATCGTCAGCCTGTCATGGGCGGTTAATCATTACCGTGATAACGCCATTAC 40839 |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| Sbjct 121 TATCTGCATCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACGCCATTAC 180 Query 40840 CTATAAAGAACAGCGCGATAA---------------------GGC---CGCATTCATTAT 40875 ||| |||| |||||||| || ||| ||| |||| Sbjct 181 CTACAAAGCCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTGGCGAACGCGGCAATTA- 239 Query 40876 CGCTGACATGCAGAAACGTCAACGCAATGTAGCAGAACTCGACGCCAGATATACAAAGGA 40935 |||||||||||| ||||| || |||| || | ||||| || | ||| || ||||| Sbjct 240 --CTGACATGCAGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATACACGAAGGA 297 Query 40936 GCTTGCTGATGCTAACGC 40953 | | ||||||||||| || Sbjct 298 GTTAGCTGATGCTAAAGC 315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136388468291656