Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_019708.1 Length=37595 Score E Sequences producing significant alignments: (Bits) Value seq237313 410 3e-110 seq237382 349 8e-92 seq237567 235 1e-57 >seq237313 Length=339 Score = 410 bits (454), Expect = 3e-110 Identities = 280/315 (89%), Gaps = 0/315 (0%) Strand=Plus/Plus Query 34912 CTGGTTATGGTCAGTTCGAGCATAAGGCTGACAGCCTGATTGCAAAATTCAAAGAAGCAG 34971 |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| | Sbjct 1 CTGGTTATGGTCAGTTCGAGCAAAAGGCTAACAGCCTGATTGCAAAATTCAAAGAAGCGG 60 Query 34972 GCGGAACGGTCAGAGAGATTGAGGTATGAGCAGAGTCACCGCGATTATCTCCGCTCTGGT 35031 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 61 GCGGAACGGTCAGAGAGATTGATGTATGAGCAGAGTCACCGCGATTATCTCCGCTCTGGT 120 Query 35032 TATCTGCATCATCGTCTGTCTGTCATGGGCTGTTAATCATTACCGTGATAACGCCATCGC 35091 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct 121 TATCTGCATCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACGCCATTAC 180 Query 35092 CTACAAAGAACAGCGAGATAAAAAAGTCAGTGAGCTGAAGCAGGCGACCGCCACCATCGC 35151 |||||||| ||||| || ||||| | ||| || ||||||| ||||| ||| | || | Sbjct 181 CTACAAAGCCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTGGCGAACGCGGCAATTAC 240 Query 35152 TGACATGCGGAAGCGTCAACGTGATGTAGCAGAACTCGACGCAAGATACACAAAGGAGCT 35211 |||||||| || |||||| |||||||| || | ||||| |||| |||||| |||||| | Sbjct 241 TGACATGCAGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATACACGAAGGAGTT 300 Query 35212 TGCTGATGCTAACGC 35226 ||||||||||| || Sbjct 301 AGCTGATGCTAAAGC 315 >seq237382 Length=259 Score = 349 bits (386), Expect = 8e-92 Identities = 216/231 (94%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 31903 ACCTTCAACTACACGGCTCACCTGTGGGATATCCGGTGGCTTAGAGAACGTGCGAGGAAA 31962 ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct 1 ACCTTCAACTACACGGCTCACCTGTGGGATATCCGGTGGCTAAGACGTCGTGCGAGGAAA 60 Query 31963 ACAAGGTGATTGACCCAAATCGAAGTTACGAACAAGAAAGCGTCGAGCGGGCTTTAACGT 32022 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct 61 ACAAGGTGATTGACCAAAATCGAAGTTACGAACAAGAAAGCGTCGAGCGAGCTTTAACGT 120 Query 32023 GCGCTAACTGCGGTCAGAAGCTGCATGTGCTGGAAGTTCACGTGTGCTCCGATTGCTGCG 32082 |||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 121 GCGCTAACTGCGGTCAGAAGCTGCATGTGCTGGAAGTTCACGTGTGTGAGCACTGCTGCG 180 Query 32083 CAGAACTGATGAGCGATCCGAATAGCTCAATGTACGAGGAAGAAGACGATG 32133 |||||||||||||||||||||||||||| ||| ||||||||||||| |||| Sbjct 181 CAGAACTGATGAGCGATCCGAATAGCTCGATGCACGAGGAAGAAGATGATG 231 >seq237567 Length=272 Score = 235 bits (260), Expect = 1e-57 Identities = 133/135 (99%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 34170 CCTTATTCCTAATTAAATAGAGCAAATCCCCTTATTGGGGCTAAGACATGAAGATGCCAG 34229 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 138 CCTTATTCCTAATTAAATAGAGCAAATCCCCTTATTGGGGGTAAGACATGAAGATGCCAG 197 Query 34230 AAAAACATGACCTGTTAGCCGCCATTCTCGCGGCAAAGGAACAAGGCATCGGGGCAATCC 34289 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 198 AAAAACATGACCTGTTGGCCGCCATTCTCGCGGCAAAGGAACAAGGCATCGGGGCAATCC 257 Query 34290 TTGCGTTTGCAATGG 34304 ||||||||||||||| Sbjct 258 TTGCGTTTGCAATGG 272 Score = 91.5 bits (100), Expect = 4e-14 Identities = 53/55 (96%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 34117 CTTCGTGAAAGCGGGTGGCAAGAGGTTGCGCTAACAACCTCCTGCCGTTTTGCCC 34171 |||||||||||||||||||| ||||| |||||||||||||||||||||||||||| Sbjct 14 CTTCGTGAAAGCGGGTGGCAGGAGGTCGCGCTAACAACCTCCTGCCGTTTTGCCC 68 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119843285378076