Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_019709.1 Length=41567 Score E Sequences producing significant alignments: (Bits) Value seq237567 444 2e-120 seq237382 367 3e-97 seq237313 334 2e-87 >seq237567 Length=272 Score = 444 bits (492), Expect = 2e-120 Identities = 254/259 (98%), Gaps = 0/259 (0%) Strand=Plus/Plus Query 37456 CTTCGTGAAAGCGGGTGGCAGGAGGTTGCGCTAACAACCTCATGCCGTTTTGCCCGTGCA 37515 |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct 14 CTTCGTGAAAGCGGGTGGCAGGAGGTCGCGCTAACAACCTCCTGCCGTTTTGCCCGTGCA 73 Query 37516 TATCGGTCACGAACAAATCTGATTACTAAACACAGTAACCTGGATTTGTTCTATCAGTAA 37575 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 74 TATCGGTCACGAACAAATCTGATTACTAAACACAGTAGCCTGGATTTGTTCTATCAGTAA 133 Query 37576 TCGACCTTATTCCTAATTAAATAGAGCAAATCCCCTTATTGGGGGTAAGACATGAAGATG 37635 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 134 TCGACCTTATTCCTAATTAAATAGAGCAAATCCCCTTATTGGGGGTAAGACATGAAGATG 193 Query 37636 CCAGaaaaaaaTGACCTGTTAGCCGCCATTCTCGCGGCAAAGGAACAAGGCATCGGGGCA 37695 ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 194 CCAGAAAAACATGACCTGTTGGCCGCCATTCTCGCGGCAAAGGAACAAGGCATCGGGGCA 253 Query 37696 ATCCTTGCGTTTGCAATGG 37714 ||||||||||||||||||| Sbjct 254 ATCCTTGCGTTTGCAATGG 272 >seq237382 Length=259 Score = 367 bits (406), Expect = 3e-97 Identities = 220/231 (95%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 34786 ACCTTCAACTACACGGCTCACCTGTGGGATATCCGGTGGCTTAGGGAACGTGCGAGGAAA 34845 ||||||||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct 1 ACCTTCAACTACACGGCTCACCTGTGGGATATCCGGTGGCTAAGACGTCGTGCGAGGAAA 60 Query 34846 ACAAGGTGATTGACCCAAATCGAAGTTACGAACAAGAAAGCGTCGAGCGGGCTTTAACGT 34905 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct 61 ACAAGGTGATTGACCAAAATCGAAGTTACGAACAAGAAAGCGTCGAGCGAGCTTTAACGT 120 Query 34906 GCGCTAACTGCGGTCAGAAGCTGCATGTGCTTGAAGTTCACGTGTGTGAGCACTGCTGCG 34965 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 121 GCGCTAACTGCGGTCAGAAGCTGCATGTGCTGGAAGTTCACGTGTGTGAGCACTGCTGCG 180 Query 34966 CAGAACTGATGAGCGATCCGAATAGCTCAATGTACGAGGAAGAAGACGATG 35016 |||||||||||||||||||||||||||| ||| ||||||||||||| |||| Sbjct 181 CAGAACTGATGAGCGATCCGAATAGCTCGATGCACGAGGAAGAAGATGATG 231 >seq237313 Length=339 Score = 334 bits (370), Expect = 2e-87 Identities = 260/315 (83%), Gaps = 21/315 (7%) Strand=Plus/Plus Query 38322 CTGGCTATGGCCAGTTCGAGCATAAGGCTGACAGCCTGATTGCAAAATTCAAAGAAGTTG 38381 |||| ||||| ||||||||||| |||||| ||||||||||||||||||||||||||| | Sbjct 1 CTGGTTATGGTCAGTTCGAGCAAAAGGCTAACAGCCTGATTGCAAAATTCAAAGAAGCGG 60 Query 38382 GCGGAACGGTCAGAGAGATTGAGGTATGAGCAGAGTAACCGCGATTATCTCCGCTCTGGT 38441 |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 61 GCGGAACGGTCAGAGAGATTGATGTATGAGCAGAGTCACCGCGATTATCTCCGCTCTGGT 120 Query 38442 TATCTGCATCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACGCCATGAC 38501 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 121 TATCTGCATCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACGCCATTAC 180 Query 38502 CTACAAAGAGCAGCGCGATAA---------------------GGCCACATCCACAATCGC 38540 |||||||| |||||||| || ||| | | |||| | Sbjct 181 CTACAAAGCCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTGGCGAACGCGGCAATTAC 240 Query 38541 TGACATGCAGAAGCGTCAACGTGACGTAGCAGAACTCGATGCCAGATATACAAAGGAGCT 38600 ||||||||||| |||||| ||||| || || | |||||||| | ||| || |||||| | Sbjct 241 TGACATGCAGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATACACGAAGGAGTT 300 Query 38601 TGCTGATGCTAACGC 38615 ||||||||||| || Sbjct 301 AGCTGATGCTAAAGC 315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132517820871372