Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_019710.1 Length=40710 Score E Sequences producing significant alignments: (Bits) Value seq237567 444 2e-120 seq237382 372 8e-99 seq237313 358 2e-94 >seq237567 Length=272 Score = 444 bits (492), Expect = 2e-120 Identities = 254/259 (98%), Gaps = 0/259 (0%) Strand=Plus/Plus Query 37903 CTTCGTGAAAGCGGGTGGCATGAGGTTGCCCTAACAACCTCCTGCCGTTTTGCCCGTGCA 37962 |||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||| Sbjct 14 CTTCGTGAAAGCGGGTGGCAGGAGGTCGCGCTAACAACCTCCTGCCGTTTTGCCCGTGCA 73 Query 37963 TATCGGTCACGAACAAATCTGATTACTAAACACAGTAGCCTGGATTTGTTCTATCAGTAA 38022 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 74 TATCGGTCACGAACAAATCTGATTACTAAACACAGTAGCCTGGATTTGTTCTATCAGTAA 133 Query 38023 TCGACCTTATTCCTAATTAAATAGAGCAAATCCCCTTATTGGGGGTAAGACATGAAGATG 38082 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 134 TCGACCTTATTCCTAATTAAATAGAGCAAATCCCCTTATTGGGGGTAAGACATGAAGATG 193 Query 38083 CCAGaaaaaaaTGACCTGTTAGCCGCCATTCTCGCGGCAAAGGAACAAGGCATCGGGGCA 38142 ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 194 CCAGAAAAACATGACCTGTTGGCCGCCATTCTCGCGGCAAAGGAACAAGGCATCGGGGCA 253 Query 38143 ATCCTTGCGTTTGCAATGG 38161 ||||||||||||||||||| Sbjct 254 ATCCTTGCGTTTGCAATGG 272 >seq237382 Length=259 Score = 372 bits (412), Expect = 8e-99 Identities = 221/231 (96%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 35236 ACCTTCAACTACACGGCTCACCTGTGGGATATCCGGTGGCTTAGAGAACGTGCGAGGAAA 35295 ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct 1 ACCTTCAACTACACGGCTCACCTGTGGGATATCCGGTGGCTAAGACGTCGTGCGAGGAAA 60 Query 35296 ACAAGGTGATTGACCCAAATCGAAGTTACGAACAACAAAGCGTCGAGCGGGCTTTAACGT 35355 ||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||| Sbjct 61 ACAAGGTGATTGACCAAAATCGAAGTTACGAACAAGAAAGCGTCGAGCGAGCTTTAACGT 120 Query 35356 GCGCTAACTGCGGTCAGAAGCTGCATGTGCTGGAAGTTCACGTGTGTGAGCACTGCTGCG 35415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 GCGCTAACTGCGGTCAGAAGCTGCATGTGCTGGAAGTTCACGTGTGTGAGCACTGCTGCG 180 Query 35416 CAGAACTGATGAGCGATCCGAATAGCTCAATGTACGAGGAAGAAGACGATG 35466 |||||||||||||||||||||||||||| ||| ||||||||||||| |||| Sbjct 181 CAGAACTGATGAGCGATCCGAATAGCTCGATGCACGAGGAAGAAGATGATG 231 >seq237313 Length=339 Score = 358 bits (396), Expect = 2e-94 Identities = 267/315 (85%), Gaps = 21/315 (7%) Strand=Plus/Plus Query 38769 CTGGTTATGGTCAGTTCGAGCATAAGGCTGACAACCTGATTGCAAAATTCAAAGAAGCAG 38828 |||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||| | Sbjct 1 CTGGTTATGGTCAGTTCGAGCAAAAGGCTAACAGCCTGATTGCAAAATTCAAAGAAGCGG 60 Query 38829 GCGGAACGGTCAGAGAGATTGAGGTATGAGCAGAGTAACCGCGATTATCTCCGCTCTGGT 38888 |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 61 GCGGAACGGTCAGAGAGATTGATGTATGAGCAGAGTCACCGCGATTATCTCCGCTCTGGT 120 Query 38889 TATCTGCATCATCGTTTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACGCCATTAC 38948 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 TATCTGCATCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACGCCATTAC 180 Query 38949 CTACAAAGCCCAGCGCGATAAA---GCCA---------------CGTAC---ATCATCGC 38987 |||||||||||||||||| ||| |||| || || || | Sbjct 181 CTACAAAGCCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTGGCGAACGCGGCAATTAC 240 Query 38988 TGACATGCAGAAGCGTCAACGTGATGTAGCAGAACTCGACGCCAGATACACAAAGGAGCT 39047 ||||||||||| |||||| |||||||| || | ||||| || | |||||| |||||| | Sbjct 241 TGACATGCAGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATACACGAAGGAGTT 300 Query 39048 TGCTGATGCTAACGC 39062 ||||||||||| || Sbjct 301 AGCTGATGCTAAAGC 315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129783159008896