Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_019711.1 Length=47288 Score E Sequences producing significant alignments: (Bits) Value seq235879 690 0.0 seq237002 666 0.0 seq237313 600 4e-167 seq234085 480 2e-131 seq237567 464 2e-126 seq237382 232 2e-56 seq235925 206 8e-49 >seq235879 Length=423 Score = 690 bits (764), Expect = 0.0 Identities = 403/423 (95%), Gaps = 0/423 (0%) Strand=Plus/Minus Query 25892 CATACAACCAATAAATGCTGAAATGAATTCTAAGCGGAGATCGCCTAGTGATTTTAAACT 25951 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 423 CATGCAACCAATAAATGCTGAAATGAATTCTAAGCGGAGATCGCCTAGTGATTTTAAACT 364 Query 25952 ATTGCTGGCAGCATTCTTGAGTCCAATATAAAAGTATTGTGTACCTTTTGCTGGGTCAGG 26011 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 363 ATTGCTGGCAGCATTCTTGAGTCCAATATAAAAGTATTGTGTGCCTTTTGCTGGGTCAGG 304 Query 26012 TTGTTCTTTAGGAGGAGTAAAAGGATCAAATGCACTAAACGAAACTGAAACAAGCGATCG 26071 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 303 TTGTTCTTTAGGAGGAGTAAAAGGATCAAATGCACTAAACGAAACTGAAACAAGCGATCG 244 Query 26072 AAAATATCCCTTTGGGATTCTTGACTCGATAAGTCTATTATTTTCAGAGAAAAAATATTC 26131 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 243 AAAATATCCCTTTGGGATTCTTGACTCGATAAGTCTATTATTTTCNNNNNNNNNNNNNNN 184 Query 26132 ATTGTTTTCTGGGTTGGTGATTGCACCAATCATTCCATTCAAAATTGTTGTTTTACCACA 26191 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 183 NNNGTTTTCTGGGTTGGTGATTGCACCAATCATTCCATTCAAAATTGTTGTTTTACCACA 124 Query 26192 CCCATTCCGCCCGATAAAAGCATGAATGTTCGTGCTGGGCATAGAATTAACCGTCACCTC 26251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 123 CCCATTCCGCCCGATAAAAGCATGAATGTTCGTGCTGGGCATAGAATTAACCGTCACCTC 64 Query 26252 AAAAGGTATAGTTAAATCACTGAATCCGGGAGCACTTTTTCTATTAAATGAAAAGTGGAA 26311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 63 AAAAGGTATAGTTAAATCACTGAATCCGGGAGCACTTTTTCTATTAAATGAAAAGTGGAA 4 Query 26312 ATC 26314 ||| Sbjct 3 ATC 1 >seq237002 Length=369 Score = 666 bits (738), Expect = 0.0 Identities = 369/369 (100%), Gaps = 0/369 (0%) Strand=Plus/Minus Query 45596 CCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTT 45655 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 369 CCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTT 310 Query 45656 GTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATC 45715 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 309 GTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATC 250 Query 45716 TTTTATGTTCATGGATATTTGTAACCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCC 45775 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 249 TTTTATGTTCATGGATATTTGTAACCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCC 190 Query 45776 TGTATTGCTGAAATGTGATTTCTCTTGATTTCAACCTATCATAGGACGTTTCTATAAGAT 45835 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 189 TGTATTGCTGAAATGTGATTTCTCTTGATTTCAACCTATCATAGGACGTTTCTATAAGAT 130 Query 45836 GCGTGTTTCTTGAGAATTTAACATTTACAACCTTTTTAAGTCCTTTTATTAACACGGTGT 45895 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 129 GCGTGTTTCTTGAGAATTTAACATTTACAACCTTTTTAAGTCCTTTTATTAACACGGTGT 70 Query 45896 TATCGTTTTCTAACACGATGTGAATATTATCTGTGGCTAGATAGTAAATATAATGTGAGA 45955 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 69 TATCGTTTTCTAACACGATGTGAATATTATCTGTGGCTAGATAGTAAATATAATGTGAGA 10 Query 45956 CGTTGTGAC 45964 ||||||||| Sbjct 9 CGTTGTGAC 1 >seq237313 Length=339 Score = 600 bits (664), Expect = 4e-167 Identities = 335/337 (99%), Gaps = 0/337 (0%) Strand=Plus/Plus Query 44478 CTGGTTATGGTCAGTTCGAGCATAAGGCTGACAGCCTGATTGCAAAATTCAAAGAAGCGG 44537 |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct 1 CTGGTTATGGTCAGTTCGAGCAAAAGGCTAACAGCCTGATTGCAAAATTCAAAGAAGCGG 60 Query 44538 GCGGAACGGTCAGAGAGATTGATGTATGAGCAGAGTCACCGCGATTATCTCCGCTCTGGT 44597 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 GCGGAACGGTCAGAGAGATTGATGTATGAGCAGAGTCACCGCGATTATCTCCGCTCTGGT 120 Query 44598 TATCTGCATCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACGCCATTAC 44657 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 TATCTGCATCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACGCCATTAC 180 Query 44658 CTACAAAGCCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTGGCGAACGCGGCAATTAC 44717 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 CTACAAAGCCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTGGCGAACGCGGCAATTAC 240 Query 44718 TGACATGCAGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATACACGAAGGAGTT 44777 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 TGACATGCAGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATACACGAAGGAGTT 300 Query 44778 AGCTGATGCTAAAGCTGAAAATGATGCTCTGCGTGAT 44814 ||||||||||||||||||||||||||||||||||||| Sbjct 301 AGCTGATGCTAAAGCTGAAAATGATGCTCTGCGTGAT 337 >seq234085 Length=323 Score = 480 bits (532), Expect = 2e-131 Identities = 295/323 (91%), Gaps = 0/323 (0%) Strand=Plus/Plus Query 1102 GTTCCTGGGTGACAAGCGTATTGAAGGCTCGGTCTGGCCAAAGTCCATCCGTGGCTCCAC 1161 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 GTTCCTGGGTGACATGCGTATTGAAGGCTCGGTCTGGCCAAAGTCCATCCGTGGCTCCAC 60 Query 1162 GCCAAAAGTGAGAGGCACCTGTCAGATTGAGCGTGCAGCCAGTGAATCCCCGCATTTTAT 1221 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 GCCAAAAGTGAGAGGCACCTGTCAGATTGAGCGTGCAGCCAGTGAATCCCCGCATTTTAT 120 Query 1222 GCGTTTTCATGTTGCCTGCCCGCATTGCGGGGAGGAGCAGTATCTTAAATTTGGCGACAA 1281 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 GCGTTTTCATGTTGCCTGCCCGCATTGCGGGGAGGAGCAGTATCTTAAATTTGGCGACAA 180 Query 1282 AGAGACGCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCTCCAGCGTGTTTTATCTCTG 1341 |||||||||| ||||||||||||||||||||||| Sbjct 181 AGAGACGCCGTTTGGCCTCAAATGGACGCCGGATGACCCCTCCAGCGTGTTTTATCTCTG 240 Query 1342 CGAGCATAATGCCTGCGTCATCCGCCAGCAGGAGCTGGACTTTACTGATGCCCGTTATAT 1401 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 CGAGCATAATGCCTGCGTCATCCGCCAGCAGGAGCTGGACTTTACTGATGCCCGTTATAT 300 Query 1402 CTGCGAAAAGACCGGGATCTGGA 1424 ||||||||||||||||||||||| Sbjct 301 CTGCGAAAAGACCGGGATCTGGA 323 >seq237567 Length=272 Score = 464 bits (514), Expect = 2e-126 Identities = 266/272 (98%), Gaps = 0/272 (0%) Strand=Plus/Plus Query 43599 TTCTACACATGATCTTCGTGAAAGCGGGTGACAGGAGGTCGCGCTAACAACCTCCTGCCG 43658 || ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1 TTTTACACATGACCTTCGTGAAAGCGGGTGGCAGGAGGTCGCGCTAACAACCTCCTGCCG 60 Query 43659 TTTTGCCCGTGCATATCGGTCACGAACAAATCTGATTACTAAACGCAGTAGCCTGGATTT 43718 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 61 TTTTGCCCGTGCATATCGGTCACGAACAAATCTGATTACTAAACACAGTAGCCTGGATTT 120 Query 43719 GTTCTATCAGTAATCGACCTTATTCCTAATTAAATAGAGCAAATCCCCTTATTGGGGCTA 43778 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 121 GTTCTATCAGTAATCGACCTTATTCCTAATTAAATAGAGCAAATCCCCTTATTGGGGGTA 180 Query 43779 AGACATGAAGATGCCAGAAAAACATGACCTGTTAGCCGCCATTCTCGCGGCAAAGGAACA 43838 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 181 AGACATGAAGATGCCAGAAAAACATGACCTGTTGGCCGCCATTCTCGCGGCAAAGGAACA 240 Query 43839 AGGCATCGGGGCAATCCTTGCGTTTGCAATGG 43870 |||||||||||||||||||||||||||||||| Sbjct 241 AGGCATCGGGGCAATCCTTGCGTTTGCAATGG 272 >seq237382 Length=259 Score = 232 bits (256), Expect = 2e-56 Identities = 134/138 (97%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 40379 AAGAAAGCGTCGAGCGGGCTTTAACGTGCGCTAACTGCGGTCAGAAGCTGCATGTGCTGG 40438 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 94 AAGAAAGCGTCGAGCGAGCTTTAACGTGCGCTAACTGCGGTCAGAAGCTGCATGTGCTGG 153 Query 40439 AAGTTCACGTGTGTGAGCACTGCTGCGCAGAACTGATGAGCGATCCGAATAGCTCAATGT 40498 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 154 AAGTTCACGTGTGTGAGCACTGCTGCGCAGAACTGATGAGCGATCCGAATAGCTCGATGC 213 Query 40499 ACGAGGAAGAAGACGATG 40516 ||||||||||||| |||| Sbjct 214 ACGAGGAAGAAGATGATG 231 Score = 104 bits (114), Expect = 7e-18 Identities = 59/60 (98%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 39886 ACCTTCAACTACACGGCTCACCTGTGGGATATCCGGTGGCTAAGACATCGTGCGAGGAAA 39945 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1 ACCTTCAACTACACGGCTCACCTGTGGGATATCCGGTGGCTAAGACGTCGTGCGAGGAAA 60 >seq235925 Length=245 Score = 206 bits (228), Expect = 8e-49 Identities = 116/117 (99%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 3455 GAGCGCCATTGTGAAGGCGATGTATGCCGCCACCATTGAGAGTGAGCTGGATACGCAGTC 3514 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 117 GAGCGCCGTTGTGAAGGCGATGTATGCCGCCACCATTGAGAGTGAGCTGGATACGCAGTC 58 Query 3515 AGCGATGGATTTTATTCTGGGCGCGAACAGTCAGGAGCAGCGGGAAAGGCTGACCGG 3571 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 57 AGCGATGGATTTTATTCTGGGCGCGAACAGTCAGGAGCAGCGGGAAAGGCTGACCGG 1 Score = 111 bits (122), Expect = 5e-20 Identities = 64/66 (97%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 3293 GCAGAAATGGACATGGATACCCCGTGAGTTACCCGGCGGGCGCGCCTCGTTCATTCACGT 3352 |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct 245 GCAGAAATGGACATGGATTCCCCGTGAGTTCCCCGGCGGGCGCGCCTCGTTCATTCACGT 186 Query 3353 TTTTGA 3358 |||||| Sbjct 185 TTTTGA 180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150773364063000