Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_019717.1 Length=45366 Score E Sequences producing significant alignments: (Bits) Value seq234085 212 2e-50 seq235925 111 5e-20 >seq234085 Length=323 Score = 212 bits (234), Expect = 2e-50 Identities = 240/322 (75%), Gaps = 0/322 (0%) Strand=Plus/Plus Query 1103 TTTCTGGGAGATAAGCGTATTGAGGGTTCTGTATGGCCAAAATCCATTCGCGGCTCTACA 1162 || ||||| || | ||||||||| || || || |||||||| ||||| || ||||| || Sbjct 2 TTCCTGGGTGACATGCGTATTGAAGGCTCGGTCTGGCCAAAGTCCATCCGTGGCTCCACG 61 Query 1163 CCGAAAGTCAAAGGTACGTGCCAGATAGAAAGGGCTGCTAAGGAGTCAGAACATTTTCTT 1222 || ||||| | ||| || || ||||| || | || || | || || |||||| | Sbjct 62 CCAAAAGTGAGAGGCACCTGTCAGATTGAGCGTGCAGCCAGTGAATCCCCGCATTTTATG 121 Query 1223 CGGTTCCATGTTCCATGCCCACACTGCGGGGAAGAGCAGTATCTGAAATTTGGCGATGAA 1282 || || |||||| | ||||| || |||||||| ||||||||||| ||||||||||| || Sbjct 122 CGTTTTCATGTTGCCTGCCCGCATTGCGGGGAGGAGCAGTATCTTAAATTTGGCGACAAA 181 Query 1283 GAGACACCATTTGGCTTTAAATGGTCTCCGGGAGAACCTTCCAGCGTTTACTACCTCTGT 1342 ||||| || |||||| | |||||| | |||| || || |||||||| | || ||||| Sbjct 182 GAGACGCCGTTTGGCCTCAAATGGACGCCGGATGACCCCTCCAGCGTGTTTTATCTCTGC 241 Query 1343 GAACACAATGCCTGTGTGATTAAACAACAAGAGCTGGACTTCCTTGAGGCCAGGTATATT 1402 || || |||||||| || || || || ||||||||||| ||| ||| | ||||| Sbjct 242 GAGCATAATGCCTGCGTCATCCGCCAGCAGGAGCTGGACTTTACTGATGCCCGTTATATC 301 Query 1403 TGTGATGAAACAGGTATCTGGA 1424 || || | || || ||||||| Sbjct 302 TGCGAAAAGACCGGGATCTGGA 323 >seq235925 Length=245 Score = 111 bits (122), Expect = 5e-20 Identities = 79/91 (87%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 3456 GTGAAGGCCATGTATGCTGCCACCATCGAGAGTGAGCTGGATACGCAGACGGCGATGGAT 3515 |||||||| |||||||| |||||||| ||||||||||||||||||||| | ||||||||| Sbjct 107 GTGAAGGCGATGTATGCCGCCACCATTGAGAGTGAGCTGGATACGCAGTCAGCGATGGAT 48 Query 3516 TTCATTCTCGGCGCGGATAATAAAGAGCAGC 3546 || ||||| |||||| | | | | ||||||| Sbjct 47 TTTATTCTGGGCGCGAACAGTCAGGAGCAGC 17 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144640318439104