Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_019720.1 Length=44120 Score E Sequences producing significant alignments: (Bits) Value seq237567 450 4e-122 seq237382 405 1e-108 seq237313 315 2e-81 >seq237567 Length=272 Score = 450 bits (498), Expect = 4e-122 Identities = 255/259 (98%), Gaps = 0/259 (0%) Strand=Plus/Plus Query 41134 CTTCGTGAAAGCTGGTGACAGGAGGTTGCGCTAACAACCTCCTGCCGTTTTGCCCGTGCA 41193 |||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct 14 CTTCGTGAAAGCGGGTGGCAGGAGGTCGCGCTAACAACCTCCTGCCGTTTTGCCCGTGCA 73 Query 41194 TATCGGTCACGAACAAATCTGATTACTAAACACAGTAGCCTGGATTTGTTCTATCAGTAA 41253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 74 TATCGGTCACGAACAAATCTGATTACTAAACACAGTAGCCTGGATTTGTTCTATCAGTAA 133 Query 41254 TCGACCTTATTCCTAATTAAATAGAGCAAATCCCCTTATTGGGGGTAAGACATGAAGATG 41313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 134 TCGACCTTATTCCTAATTAAATAGAGCAAATCCCCTTATTGGGGGTAAGACATGAAGATG 193 Query 41314 CCAGAAAAACATGACCTGTTAGCCGCCATTCTCGCGGCAAAGGAACAAGGCATCGGGGCA 41373 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 194 CCAGAAAAACATGACCTGTTGGCCGCCATTCTCGCGGCAAAGGAACAAGGCATCGGGGCA 253 Query 41374 ATCCTTGCGTTTGCAATGG 41392 ||||||||||||||||||| Sbjct 254 ATCCTTGCGTTTGCAATGG 272 >seq237382 Length=259 Score = 405 bits (448), Expect = 1e-108 Identities = 245/259 (95%), Gaps = 0/259 (0%) Strand=Plus/Plus Query 38567 ACCTTCAACTACACGGCTCACCTGTGGGATATCCGGTGGCTTAGAGAACGTGCGAGGAAA 38626 ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct 1 ACCTTCAACTACACGGCTCACCTGTGGGATATCCGGTGGCTAAGACGTCGTGCGAGGAAA 60 Query 38627 ACAAGGTGATTGACCCAAATCGAAGTTACGAACAAGAAAGCGTCGAGCGAGCTTTAACGT 38686 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 ACAAGGTGATTGACCAAAATCGAAGTTACGAACAAGAAAGCGTCGAGCGAGCTTTAACGT 120 Query 38687 GTGCTAACTGCGGTCAGAAGCTGCATGTGCTGGAAGTTCATGTGTGTGAGCACTGCTGCG 38746 | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 121 GCGCTAACTGCGGTCAGAAGCTGCATGTGCTGGAAGTTCACGTGTGTGAGCACTGCTGCG 180 Query 38747 CAGAACTGATGAGCGATCCGAATAGCTCAATGTACGAGGAAGAAGACGATGGCTAAACCA 38806 |||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||| Sbjct 181 CAGAACTGATGAGCGATCCGAATAGCTCGATGCACGAGGAAGAAGATGATGGCTAAACCA 240 Query 38807 GCGCGAAGGAAATGCAAAA 38825 |||||||| ||| |||| Sbjct 241 GCGCGAAGACGATGTAAAA 259 >seq237313 Length=339 Score = 315 bits (348), Expect = 2e-81 Identities = 258/318 (81%), Gaps = 27/318 (8%) Strand=Plus/Plus Query 42000 CTGGTTATGGACAGTTCGAGCATAAGGCTGACAGCCTGATTGCAAAATTCAAAGAAGCAG 42059 |||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||| | Sbjct 1 CTGGTTATGGTCAGTTCGAGCAAAAGGCTAACAGCCTGATTGCAAAATTCAAAGAAGCGG 60 Query 42060 GCGGAACGGTCAGAGAGATTGAGGTATGAGCAGAGTAACCGCGATTATCTCCGCTCTGGT 42119 |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 61 GCGGAACGGTCAGAGAGATTGATGTATGAGCAGAGTCACCGCGATTATCTCCGCTCTGGT 120 Query 42120 TATCTGCATCATCGTCAGCCTGTCATGGGCGGTTAATCATTACCGTGATAACGCCATTAC 42179 |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| Sbjct 121 TATCTGCATCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACGCCATTAC 180 Query 42180 CTATAAAGAACAGCGCGATAA---------------------GGC---CGCATTCATTAT 42215 ||| |||| |||||||| || ||| ||| |||| Sbjct 181 CTACAAAGCCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTGGCGAACGCGGCAATTA- 239 Query 42216 CGCTGACATGCAGAAACGTCAACGCAATGTAGCAGAACTCGACGCCAGATATACAAAGGA 42275 |||||||||||| ||||| || |||| || | ||||| || | ||| || ||||| Sbjct 240 --CTGACATGCAGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATACACGAAGGA 297 Query 42276 GCTTGCTGATGCTAACGC 42293 | | ||||||||||| || Sbjct 298 GTTAGCTGATGCTAAAGC 315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 140664368986776