Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25]
237,614 sequences; 309,419,125 total letters
Query= NC_019723.1
Length=47090
Score E
Sequences producing significant alignments: (Bits) Value
seq235879 690 0.0
seq237002 666 0.0
seq237313 600 4e-167
seq237567 491 1e-134
seq234085 480 2e-131
seq237382 295 2e-75
seq235925 206 8e-49
>seq235879
Length=423
Score = 690 bits (764), Expect = 0.0
Identities = 403/423 (95%), Gaps = 0/423 (0%)
Strand=Plus/Minus
Query 25892 CATACAACCAATAAATGCTGAAATGAATTCTAAGCGGAGATCGCCTAGTGATTTTAAACT 25951
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 423 CATGCAACCAATAAATGCTGAAATGAATTCTAAGCGGAGATCGCCTAGTGATTTTAAACT 364
Query 25952 ATTGCTGGCAGCATTCTTGAGTCCAATATAAAAGTATTGTGTACCTTTTGCTGGGTCAGG 26011
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 363 ATTGCTGGCAGCATTCTTGAGTCCAATATAAAAGTATTGTGTGCCTTTTGCTGGGTCAGG 304
Query 26012 TTGTTCTTTAGGAGGAGTAAAAGGATCAAATGCACTAAACGAAACTGAAACAAGCGATCG 26071
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 303 TTGTTCTTTAGGAGGAGTAAAAGGATCAAATGCACTAAACGAAACTGAAACAAGCGATCG 244
Query 26072 AAAATATCCCTTTGGGATTCTTGACTCGATAAGTCTATTATTTTCAGAGAAAAAATATTC 26131
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 243 AAAATATCCCTTTGGGATTCTTGACTCGATAAGTCTATTATTTTCNNNNNNNNNNNNNNN 184
Query 26132 ATTGTTTTCTGGGTTGGTGATTGCACCAATCATTCCATTCAAAATTGTTGTTTTACCACA 26191
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 183 NNNGTTTTCTGGGTTGGTGATTGCACCAATCATTCCATTCAAAATTGTTGTTTTACCACA 124
Query 26192 CCCATTCCGCCCGATAAAAGCATGAATGTTCGTGCTGGGCATAGAATTAACCGTCACCTC 26251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 123 CCCATTCCGCCCGATAAAAGCATGAATGTTCGTGCTGGGCATAGAATTAACCGTCACCTC 64
Query 26252 AAAAGGTATAGTTAAATCACTGAATCCGGGAGCACTTTTTCTATTAAATGAAAAGTGGAA 26311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 63 AAAAGGTATAGTTAAATCACTGAATCCGGGAGCACTTTTTCTATTAAATGAAAAGTGGAA 4
Query 26312 ATC 26314
|||
Sbjct 3 ATC 1
>seq237002
Length=369
Score = 666 bits (738), Expect = 0.0
Identities = 369/369 (100%), Gaps = 0/369 (0%)
Strand=Plus/Minus
Query 45398 CCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTT 45457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 369 CCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTT 310
Query 45458 GTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATC 45517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 309 GTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATC 250
Query 45518 TTTTATGTTCATGGATATTTGTAACCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCC 45577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 249 TTTTATGTTCATGGATATTTGTAACCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCC 190
Query 45578 TGTATTGCTGAAATGTGATTTCTCTTGATTTCAACCTATCATAGGACGTTTCTATAAGAT 45637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 189 TGTATTGCTGAAATGTGATTTCTCTTGATTTCAACCTATCATAGGACGTTTCTATAAGAT 130
Query 45638 GCGTGTTTCTTGAGAATTTAACATTTACAACCTTTTTAAGTCCTTTTATTAACACGGTGT 45697
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 129 GCGTGTTTCTTGAGAATTTAACATTTACAACCTTTTTAAGTCCTTTTATTAACACGGTGT 70
Query 45698 TATCGTTTTCTAACACGATGTGAATATTATCTGTGGCTAGATAGTAAATATAATGTGAGA 45757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 69 TATCGTTTTCTAACACGATGTGAATATTATCTGTGGCTAGATAGTAAATATAATGTGAGA 10
Query 45758 CGTTGTGAC 45766
|||||||||
Sbjct 9 CGTTGTGAC 1
>seq237313
Length=339
Score = 600 bits (664), Expect = 4e-167
Identities = 335/337 (99%), Gaps = 0/337 (0%)
Strand=Plus/Plus
Query 44280 CTGGTTATGGTCAGTTCGAGCATAAGGCTGACAGCCTGATTGCAAAATTCAAAGAAGCGG 44339
|||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||
Sbjct 1 CTGGTTATGGTCAGTTCGAGCAAAAGGCTAACAGCCTGATTGCAAAATTCAAAGAAGCGG 60
Query 44340 GCGGAACGGTCAGAGAGATTGATGTATGAGCAGAGTCACCGCGATTATCTCCGCTCTGGT 44399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 GCGGAACGGTCAGAGAGATTGATGTATGAGCAGAGTCACCGCGATTATCTCCGCTCTGGT 120
Query 44400 TATCTGCATCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACGCCATTAC 44459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 TATCTGCATCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACGCCATTAC 180
Query 44460 CTACAAAGCCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTGGCGAACGCGGCAATTAC 44519
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 CTACAAAGCCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTGGCGAACGCGGCAATTAC 240
Query 44520 TGACATGCAGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATACACGAAGGAGTT 44579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 TGACATGCAGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATACACGAAGGAGTT 300
Query 44580 AGCTGATGCTAAAGCTGAAAATGATGCTCTGCGTGAT 44616
|||||||||||||||||||||||||||||||||||||
Sbjct 301 AGCTGATGCTAAAGCTGAAAATGATGCTCTGCGTGAT 337
>seq237567
Length=272
Score = 491 bits (544), Expect = 1e-134
Identities = 272/272 (100%), Gaps = 0/272 (0%)
Strand=Plus/Plus
Query 43401 TTTTACACATGACCTTCGTGAAAGCGGGTGGCAGGAGGTCGCGCTAACAACCTCCTGCCG 43460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 TTTTACACATGACCTTCGTGAAAGCGGGTGGCAGGAGGTCGCGCTAACAACCTCCTGCCG 60
Query 43461 TTTTGCCCGTGCATATCGGTCACGAACAAATCTGATTACTAAACACAGTAGCCTGGATTT 43520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 TTTTGCCCGTGCATATCGGTCACGAACAAATCTGATTACTAAACACAGTAGCCTGGATTT 120
Query 43521 GTTCTATCAGTAATCGACCTTATTCCTAATTAAATAGAGCAAATCCCCTTATTGGGGGTA 43580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 GTTCTATCAGTAATCGACCTTATTCCTAATTAAATAGAGCAAATCCCCTTATTGGGGGTA 180
Query 43581 AGACATGAAGATGCCAGAAAAACATGACCTGTTGGCCGCCATTCTCGCGGCAAAGGAACA 43640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 AGACATGAAGATGCCAGAAAAACATGACCTGTTGGCCGCCATTCTCGCGGCAAAGGAACA 240
Query 43641 AGGCATCGGGGCAATCCTTGCGTTTGCAATGG 43672
||||||||||||||||||||||||||||||||
Sbjct 241 AGGCATCGGGGCAATCCTTGCGTTTGCAATGG 272
>seq234085
Length=323
Score = 480 bits (532), Expect = 2e-131
Identities = 295/323 (91%), Gaps = 0/323 (0%)
Strand=Plus/Plus
Query 1102 GTTCCTGGGTGACAAGCGTATTGAAGGCTCGGTCTGGCCAAAGTCCATCCGTGGCTCCAC 1161
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 GTTCCTGGGTGACATGCGTATTGAAGGCTCGGTCTGGCCAAAGTCCATCCGTGGCTCCAC 60
Query 1162 GCCAAAAGTGAGAGGCACCTGTCAGATTGAGCGTGCAGCCAGTGAATCCCCGCATTTTAT 1221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 GCCAAAAGTGAGAGGCACCTGTCAGATTGAGCGTGCAGCCAGTGAATCCCCGCATTTTAT 120
Query 1222 GCGTTTTCATGTTGCCTGCCCGCATTGCGGGGAGGAGCAGTATCTTAAATTTGGCGACAA 1281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 GCGTTTTCATGTTGCCTGCCCGCATTGCGGGGAGGAGCAGTATCTTAAATTTGGCGACAA 180
Query 1282 AGAGACGCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCTCCAGCGTGTTTTATCTCTG 1341
|||||||||| |||||||||||||||||||||||
Sbjct 181 AGAGACGCCGTTTGGCCTCAAATGGACGCCGGATGACCCCTCCAGCGTGTTTTATCTCTG 240
Query 1342 CGAGCATAATGCCTGCGTCATCCGCCAGCAGGAGCTGGACTTTACTGATGCCCGTTATAT 1401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 CGAGCATAATGCCTGCGTCATCCGCCAGCAGGAGCTGGACTTTACTGATGCCCGTTATAT 300
Query 1402 CTGCGAAAAGACCGGGATCTGGA 1424
|||||||||||||||||||||||
Sbjct 301 CTGCGAAAAGACCGGGATCTGGA 323
>seq237382
Length=259
Score = 295 bits (326), Expect = 2e-75
Identities = 165/166 (99%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 40696 AAGAAAGCGTCGAGCGGGCTTTAACGTGCGCTAACTGCGGTCAGAAGCTGCATGTGCTGG 40755
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 94 AAGAAAGCGTCGAGCGAGCTTTAACGTGCGCTAACTGCGGTCAGAAGCTGCATGTGCTGG 153
Query 40756 AAGTTCACGTGTGTGAGCACTGCTGCGCAGAACTGATGAGCGATCCGAATAGCTCGATGC 40815
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 154 AAGTTCACGTGTGTGAGCACTGCTGCGCAGAACTGATGAGCGATCCGAATAGCTCGATGC 213
Query 40816 ACGAGGAAGAAGATGATGGCTAAACCAGCGCGAAGACGATGTAAAA 40861
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 214 ACGAGGAAGAAGATGATGGCTAAACCAGCGCGAAGACGATGTAAAA 259
Score = 104 bits (114), Expect = 7e-18
Identities = 59/60 (98%), Gaps = 0/60 (0%)
Strand=Plus/Plus
Query 40203 ACCTTCAACTACACGGCTCACCTGTGGGATATCCGGTGGCTAAGACATCGTGCGAGGAAA 40262
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1 ACCTTCAACTACACGGCTCACCTGTGGGATATCCGGTGGCTAAGACGTCGTGCGAGGAAA 60
>seq235925
Length=245
Score = 206 bits (228), Expect = 8e-49
Identities = 116/117 (99%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 3455 GAGCGCCATTGTGAAGGCGATGTATGCCGCCACCATTGAGAGTGAGCTGGATACGCAGTC 3514
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 117 GAGCGCCGTTGTGAAGGCGATGTATGCCGCCACCATTGAGAGTGAGCTGGATACGCAGTC 58
Query 3515 AGCGATGGATTTTATTCTGGGCGCGAACAGTCAGGAGCAGCGGGAAAGGCTGACCGG 3571
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 57 AGCGATGGATTTTATTCTGGGCGCGAACAGTCAGGAGCAGCGGGAAAGGCTGACCGG 1
Score = 111 bits (122), Expect = 5e-20
Identities = 64/66 (97%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 3293 GCAGAAATGGACATGGATACCCCGTGAGTTACCCGGCGGGCGCGCCTCGTTCATTCACGT 3352
|||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct 245 GCAGAAATGGACATGGATTCCCCGTGAGTTCCCCGGCGGGCGCGCCTCGTTCATTCACGT 186
Query 3353 TTTTGA 3358
||||||
Sbjct 185 TTTTGA 180
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 150141551870736
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |